Teredinibacter turnerae: TERTU_0108
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Entry
TERTU_0108 CDS
T00952
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ttu
Teredinibacter turnerae
Pathway
ttu03030
DNA replication
ttu03430
Mismatch repair
ttu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TERTU_0108
03430 Mismatch repair
TERTU_0108
03440 Homologous recombination
TERTU_0108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttu03032
]
TERTU_0108
03400 DNA repair and recombination proteins [BR:
ttu03400
]
TERTU_0108
Enzymes [BR:
ttu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TERTU_0108
DNA replication proteins [BR:
ttu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TERTU_0108
DNA repair and recombination proteins [BR:
ttu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TERTU_0108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ACR11219
UniProt:
C5BKW5
LinkDB
All DBs
Position
121554..122261
Genome browser
AA seq
235 aa
AA seq
DB search
MFYSLSYRWQKKRYGKAASKTPLAGIYQATAPVSRSLMRENRFLVVDCEMSGLDANRSQL
LSIGWVVIENARITHASGKHLLIHADRGAGDSTRIHGLHDATIAGAKSAAAAITLLAKQV
PGSVLVFHHAPLDLRFLQQTAYENFRCPLLFGYVDTMLIEQRRLQLQGAESGLRLAQCRE
RYGLPPISGHHNAMTDARATAELLLAQTSYLGGAGRVSLCRMGIQCSRNQYVRGV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgttctatagcctgagctatcgctggcaaaaaaagcgctacggcaaggcagcttcaaaa
acgccacttgccggcatctaccaggcaacggcacctgtcagccgcagcctgatgcgcgaa
aatcgctttctggtggtggattgcgaaatgagcgggttagatgcgaatcgcagccagctg
ctcagtattggttgggtagtgatcgagaatgcacggataacccatgccagtggcaaacac
ctgctgattcatgcagaccgcggggcaggggatagtacccgtatccacggcctccatgat
gcaaccatcgcgggcgccaagagtgccgctgcggcgattactttgttggccaaacaggtg
cccggcagcgtgctggtgtttcatcacgcaccactggacttgcgctttctgcagcaaacc
gcctacgaaaattttcggtgtccgctccttttcggttatgtggacactatgctcattgag
cagcggcgcctgcaactacagggagcggaaagcggattgcgcctggcacagtgtcgtgag
cgctatggcttgccgccaatttcaggccaccacaacgcgatgacggacgcgcgcgcgacg
gcagagttgctccttgcacagaccagctatcttggtggcgctgggcgtgtttcattgtgc
cgcatggggattcaatgcagtcgcaatcaatatgtcaggggcgtttga
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