Teredinibacter turnerae: TERTU_0130
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Entry
TERTU_0130 CDS
T00952
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ttu
Teredinibacter turnerae
Pathway
ttu00040
Pentose and glucuronate interconversions
ttu01100
Metabolic pathways
ttu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TERTU_0130
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TERTU_0130
Enzymes [BR:
ttu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
TERTU_0130
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Paralog
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GFIT
Motif
Pfam:
Pectate_lyase_4
RicinB_lectin_2
Ricin_B_lectin
Motif
Other DBs
NCBI-ProteinID:
ACS93529
UniProt:
C6AQY7
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All DBs
Position
142271..143539
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AA seq
422 aa
AA seq
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MGTAHQQWRLLQSNNFNGAYAIVNVNSGKSLTVAGGSDGDNIYQNSDAAVSSQRWYITSL
ENGCGSSSGSSSSSSSGTPNYAQGVDGFAAQYGADGLATTTGGGNATPVTISSCAQLQQL
AEDNTLKTLILPNRTLDCRSANRSQRVCVLSCGNGISTPLYRVATSSQSCADLGGSDNNV
AYLNQNESTIRVGSNTTIVGAGRDAKVIGGSFDLGSASNVILKNFTITEVNAGIIEAGDA
ISLNNSSHVWIDHMRLSKISDGLLDSYDSHNITVSWSHFDGVNTELCWGTDPYVSLLQNT
EATFHHNFFDSGYGRNPKIGGSASRVHMYNNYWKDIYYFSMSVSDGARAKVEGNYYQNAN
RPHWNDGGYIDANTGSNRYTGRSVSSSQDDSGESSWDVSLYNYTRDSVDNLPSTLPAAVG
PQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgggaactgctcatcagcagtggcggttactgcaatcaaataatttcaatggtgcctat
gccatcgttaacgtaaacagtggtaaaagcttgactgtagcgggtggtagcgacggcgat
aatatctaccagaattcagatgcggctgtttcatcccaacgctggtatatcacctcgctg
gaaaatggttgcggtagtagcagtggtagttcaagcagttcatcaagcggcacaccgaat
tacgctcagggtgtcgatggttttgcggcacaatacggggcagatggtcttgccacaacc
accggcggtggcaatgcaacaccagtgacgatttccagttgtgcgcaattgcagcagctc
gcggaggacaatactttgaagacgctgattttgccgaacaggacactggattgccgttct
gccaatcgcagtcagcgggtgtgtgtgctgtcctgtggaaatggtatcagcacaccgcta
taccgggtcgcaacttcaagccaaagctgcgctgatcttggtggcagcgataacaatgtg
gcttatttgaatcagaacgaatccacgattcgtgtcggctccaatacgacgattgtcggc
gccgggcgcgatgcgaaggtaattggtggcagtttcgatcttggtagcgccagtaacgtt
attctgaaaaattttacgatcaccgaagtaaacgccggcattattgaagcgggcgatgcg
ataagcctgaacaacagttcacatgtttggatcgaccatatgcggttgagtaaaatcagt
gacggtttgctcgacagttatgacagccacaacattactgtgagctggagccattttgac
ggcgttaacactgagttgtgttggggaacagacccctacgtgagtttgcttcaaaacaca
gaggcgactttccaccataacttctttgactcgggttatggccgcaatccaaaaattggc
ggtagtgcatcacgcgtgcatatgtacaacaattactggaaggacatctattatttttcc
atgagcgttagcgatggtgcgcgtgcgaaagtggagggtaattactaccagaatgcaaat
cgtccgcactggaacgatggcggttatattgatgcaaatacaggttctaatcgctatacc
gggcgctctgtgagttcctcccaggatgacagcggagaatccagttgggatgtttcactc
tataactacacccgggacagcgtcgacaatctgccttcaaccttacctgctgcagtgggt
ccacagtaa
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