Teredinibacter turnerae: TERTU_0178
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Entry
TERTU_0178 CDS
T00952
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ttu
Teredinibacter turnerae
Pathway
ttu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TERTU_0178 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttu03400
]
TERTU_0178 (mutM)
Enzymes [BR:
ttu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TERTU_0178 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TERTU_0178 (mutM)
DNA repair and recombination proteins [BR:
ttu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TERTU_0178 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ACR12438
UniProt:
C5BLG1
LinkDB
All DBs
Position
complement(195433..196251)
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AA seq
272 aa
AA seq
DB search
MPELPEVETTRRGIAPHILHHPITAVTLRHTQLRWPIDKALSRNLPGRTLVRADRRGKYL
LLAVDDGRTLIWHLGMSGSLRIVEPTEPPGKHDHIDLRFAHGRVLRYHDPRRFGAFLATA
DDPAQHALICHLGPEPLTDDFNGEYLYERSRKRSTAVKSWIMDSRVVVGVGNIYANESLF
LAKIHPLRAAGKLTRPACHRLADIIKAVLARSITQGGTTLRDFVGGDGKPGYFAQQLNVY
GRGGEPCPVCAKPLTEKPLSQRTTVYCTHCQN
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttccggaagttgaaacgacccgccgcggtatagcgccacacatactccat
catcccattaccgcggtgacccttcggcatacgcagcttcgctggccgattgataaggcg
cttagtcgcaacctccccggccgcacactggttcgcgcagatcgccgcggaaaatactta
ctgctcgccgtcgacgacggccgcacactgatctggcacctcggcatgtccggcagcttg
cgcattgttgaacccacggagccaccgggcaagcatgaccacattgatctgcgtttcgcc
cacggtagagtgcttcgttaccatgacccgcggcgcttcggcgcatttttggccaccgca
gacgatcccgcgcagcacgcgctgatctgccacctgggaccagaacccttaactgacgat
tttaacggtgagtacctttacgaacgttcgcgcaaacgttcaactgcggtaaaaagctgg
attatggacagccgggttgtggtgggcgtaggtaatatctacgccaatgaatcgctgttt
ttggcgaagattcatccgttgcgcgcggcgggaaaactaacgagaccggcatgccatcga
cttgcggacatcatcaaagctgtgctcgcgcgctcaattacgcaagggggtacaaccttg
cgtgacttcgtcggcggtgacggcaagcccggatattttgcccagcaactcaacgtgtac
ggacgcggtggcgagccctgcccggtctgcgccaaaccgctgacagaaaagccgttaagc
cagagaacgaccgtgtactgcactcattgccagaactag
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