Teredinibacter turnerae: TERTU_0613
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Entry
TERTU_0613 CDS
T00952
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ttu
Teredinibacter turnerae
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ttu03009
]
TERTU_0613 (rimO)
Enzymes [BR:
ttu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TERTU_0613 (rimO)
Ribosome biogenesis [BR:
ttu03009
]
Prokaryotic type
ribosomal protein modification factors
TERTU_0613 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ACR14011
UniProt:
C5BNP3
LinkDB
All DBs
Position
628955..630274
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AA seq
439 aa
AA seq
DB search
MTQKVGFISLGCPKALVDSERILTQLKLDGYSVVPSYDDADLVVVNTCGFIDSAKQESLD
AISEAMSENGKVIVTGCMGKGKDAEIIRESFPNVLSVTGPAAYEEVMGAVHEYIPPVRDH
NPHVDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPDMRGDLVSRPIGDVLNEAERLV
NAGTRELLVISQDTSAYGVDLKYRTGFWQGRPVKTRMQELCEALGEMGVWVRLHYVYPYP
HVDNVIPLMAEGKILPYLDIPFQHASPTVLKAMQRPAHQEKTLDRIHAWRKMCPDLTLRS
TFIVGFPGETDADFELLLDWLEDAQLDRVGCFQYSPVEGAAANALPNPVPEEVKQERWER
FMAAQQRISAARLQAKIGKTIDVLIDRSEGVNALGRSFADAPEIDGVVIVEDSAHLPAGS
LIKARVTAADEYDIWAEPL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaaaagttggttttatttctctcggttgccccaaagccttggtggattccgag
cgaattctcacccagttaaaactggacggctacagtgtcgtgccgagctatgacgatgct
gatctggtggtggtaaacacctgtggatttatcgatagcgccaagcaggaatcgctggat
gctatcagcgaagccatgagcgaaaatggcaaagtgattgttaccggctgtatgggtaaa
ggcaaagacgcggaaattatccgcgaaagcttccccaatgttctcagtgtcaccgggccc
gcagcgtacgaagaagtcatgggtgcggtacacgagtacattccgccggtgcgtgaccac
aacccgcatgtggacctggtgccaccgcagggcgtcaagttaacgccgcgtcactacgcc
tatctgaaaatttctgaaggctgcaaccaccgctgttccttctgcattattcccgatatg
cggggcgatctggtaagccgcccgattggcgacgtgttgaacgaggccgagcgtctggtg
aatgccggtacccgtgagctgttggtgatttctcaggataccagcgcctatggggtggac
ctgaaataccgcacgggcttctggcaggggcggccggtaaaaacccgcatgcaggaactg
tgtgaggcactgggtgagatgggtgtgtgggttcggctgcactatgtgtatccctacccg
catgtggataacgttattccattgatggccgagggcaaaatcctcccgtatttggatatc
cctttccagcacgcgagcccaacggtgttgaaagcgatgcaacgcccggcacatcaagaa
aaaaccctggatcggattcacgcttggcgcaaaatgtgcccggatctgacgctgcgttcg
acgttcattgtgggtttccccggtgaaaccgatgcggattttgaattgttactcgactgg
ctggaagacgcccaactggatcgtgttggctgtttccagtattcgccggtggagggggcc
gcggccaatgcactgccaaacccggtgccggaagaggtgaagcaggaacgctgggagcgg
tttatggcggcgcagcagcgaatttctgcggccaggttgcaggcgaaaatcggcaaaact
attgatgtgttaatcgatcgcagtgaaggcgtaaatgcacttggccgcagtttcgccgac
gcaccggaaatcgacggtgtggttattgttgaagacagcgcccacctgcccgctggaagt
ctcattaaagcgcgtgttaccgccgcggatgaatacgatatctgggcagagcccctatag
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