Teredinibacter turnerae: TERTU_0647
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Entry
TERTU_0647 CDS
T00952
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ttu
Teredinibacter turnerae
Pathway
ttu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TERTU_0647 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttu03019
]
TERTU_0647 (recQ)
03400 DNA repair and recombination proteins [BR:
ttu03400
]
TERTU_0647 (recQ)
Enzymes [BR:
ttu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TERTU_0647 (recQ)
Messenger RNA biogenesis [BR:
ttu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TERTU_0647 (recQ)
DNA repair and recombination proteins [BR:
ttu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TERTU_0647 (recQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HRDC
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACR12963
UniProt:
C5BNS0
LinkDB
All DBs
Position
complement(661877..663682)
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AA seq
601 aa
AA seq
DB search
MSDSPLDILNHVFGYDSFRASQRDIVNCVTGGQDALVIMPTGGGKSLCYQIPALARTGVG
VVVSPLIALMEDQVSALKELGVNAGYLNSTLDYDTVWHTENAIRSGELDMVYIAPERLIQ
ERTLALLHDAEIALFAIDEAHCVAQWGHDFRADYLKLDVLHNQFPKVPRIALTATADERT
RAEIIERLRLENAQQFISGFDRPNIHYRIQQKNKPREQLLRFLKDEQQGNCGVIYCLSRA
KVEDTATWLCQQGFNALPYHAGLPASVRQQNQSRFLREDNIIIVATIAFGMGIDKPDVRF
VCHLDMPKSVEAYYQETGRAGRDGQPSTALLLYGLEDIVKLRQMTENSDGSEMFKRQEQH
RLNAMLGLCEVTGCRRQVLLRYFGDEMPEPCGNCDNCDSPPDTWDATEAVRKALSCVYRS
GQRFGASHVIAILRGSDNEKIRTCGHNHLSTYGIGKELSTDEWRSVFRQLIASGLLAVDT
AGYGALQLTEQCRPILRNEQTIAMRRDKPVQTRATQRKPTQDIDEAQIPLWNALRRVRKE
LADEHGVPPYVIFHDATLKDMLEKFPLSEWEMLSVTGVGDRKMAQFGEAFLEVFREFEYD
Q
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagtccactcgatatactgaatcacgtttttggttacgacagtttccgcgcg
agtcaacgcgatatcgtcaactgcgttaccgggggccaggacgccctcgtcattatgccc
actggcggcggaaaatcactgtgctaccaaattcctgcgctcgcgcgaaccggcgttggc
gtcgtcgtttctccgctgatcgccctgatggaagaccaggtgagcgcactcaaggagctc
ggcgttaacgccggctatttaaattccacgctcgattacgacaccgtatggcacacggaa
aatgcgatccgcagcggtgagctggatatggtttacatcgcgccagagcgattgattcaa
gagcggaccctcgcgcttctccacgatgcggaaattgcactgttcgccattgatgaagcc
cattgtgttgcccaatggggacatgattttcgcgctgattatttaaaactggatgtcctc
cacaaccagtttcccaaggtaccgcgaatcgcgcttaccgctacagcagacgaacgcact
cgcgcagaaattattgaacggctgcgcctggaaaacgcccagcaatttatcagtgggttt
gaccgccccaatattcattaccggattcaacagaaaaacaaaccgcgcgagcagctgtta
cgatttttaaaagacgagcaacagggcaattgtggcgtgatctattgtctgtcccgcgcc
aaagtcgaagatactgccacctggttatgccagcaaggtttcaacgcactgccgtatcac
gcagggctgcctgccagcgtgcggcagcaaaaccaaagccgctttctgcgggaagacaat
attattattgtcgctaccattgcgttcggaatgggcatcgataaacctgatgtgcgcttt
gtctgccatttagatatgcccaaaagtgtggaggcgtattatcaggaaaccgggcgcgcc
gggcgcgacggtcagccatccacggcgctactgctttacgggctggaagacattgtgaaa
ttgcgtcagatgaccgaaaactctgacggctcggaaatgtttaagcggcaggagcagcac
cgacttaacgccatgctggggctgtgcgaagtcaccggctgccgacgccaggtactgttg
cggtattttggcgacgaaatgccagagccctgcggtaactgcgataactgcgacagcccg
ccggacacatgggacgccaccgaagccgtgcgcaaagcgctgagctgtgtttatcgcagt
ggccagcgtttcggcgccagccatgttatcgccattttacgcggcagcgacaatgaaaaa
attcgcacctgtggccacaatcatttatcgacttacggtatcggcaaagaattatctacg
gatgaatggcgctcggtgtttcgccagcttattgccagcggattgcttgcggtcgacacc
gccggctatggcgccctccagctcaccgaacagtgtcggcctattctgcgcaatgaacag
acgattgcaatgcgtcgcgacaagccagttcaaacacgcgcaacccagcgcaaaccgaca
caggacatcgacgaagcgcaaattccgctgtggaacgcactgcgccgcgttcgcaaagaa
ttggcagacgaacatggcgttccgccttatgttatttttcatgacgcaacgctgaaagac
atgctcgagaagtttccactgagtgagtgggaaatgctttcagtgaccggagtcggcgac
cgtaaaatggcacagtttggcgaagcctttttagaagtattccgcgaattcgagtatgac
caataa
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