Teredinibacter turnerae: TERTU_0933
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Entry
TERTU_0933 CDS
T00952
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ttu
Teredinibacter turnerae
Pathway
ttu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TERTU_0933 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttu03021
]
TERTU_0933 (rpoA)
03400 DNA repair and recombination proteins [BR:
ttu03400
]
TERTU_0933 (rpoA)
Enzymes [BR:
ttu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TERTU_0933 (rpoA)
Transcription machinery [BR:
ttu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TERTU_0933 (rpoA)
DNA repair and recombination proteins [BR:
ttu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TERTU_0933 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF211
Motif
Other DBs
NCBI-ProteinID:
ACR11371
UniProt:
C5BQ86
LinkDB
All DBs
Position
973972..974961
Genome browser
AA seq
329 aa
AA seq
DB search
MQSAVNEFLTPRHIDVTELAPTRAKVVLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IAGVQHEYSAIEGVREDVIEILLNIKNLAVVMHGKDTTTLSLVKQGPGVVTGADIQLDHD
VEIANPELVIANITGDVTLDMKLTIARGRGYQPVDARQSDEDETRAIGRLQLDASFSPVR
RLAYTVESARVEQRTDLDKLVLDLETNGTIDPEEAIRRAATILQQQLAVFVDLEGEKEVE
PEQKEDQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDILASRGLSLGMRLENWPPASLKNND
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcgcagtgaacgaatttttgacacctcgtcatattgatgtaacagagctcgcg
ccgactcgagcgaaggtggttctcgagccattggagcgcggtttcggtcataccctgggt
aatgcgttgcgcagaattctgctgtcttccatgccaggttgcgcagtaaccgaagttgag
atcgctggtgttcagcacgagtacagtgctatagaaggcgttcgcgaagatgtaatcgag
attcttctcaatatcaaaaacctcgctgttgttatgcacggcaaagacaccactaccctg
tcgcttgttaagcagggccctggtgttgtaacgggtgcagacattcagctggatcacgat
gttgagatcgcgaaccctgagctggttattgccaatatcactggtgacgtgacgctcgac
atgaagctcactatcgcccgtggtcgaggctaccagccggttgatgcgcgtcagtctgat
gaagacgaaactcgcgcaattggccggttgcagttagacgcatctttcagtccggttcgc
cgcctggcttatacggtagaaagtgcgcgtgttgaacagcgtaccgacttggataagctg
gtgctggatcttgagaccaacggtactatcgatccagaagaggctatccgtcgcgcagcg
accattcttcagcagcagctggcggtgttcgttgatctggaaggtgagaaggaagttgag
ccagagcagaaggaagatcaaatcgatccggtacttctgcgtccggtagacgaccttgag
ctgaccgtacgttcggccaactgtctgaaagcggaaaacatttactacattggcgatctt
atccagcgtactgaagttgagctgttgaaaacgccaaaccttggtaaaaagtcgcttaca
gaaatcaaagatatactcgcgtcacgcgggttgtctttgggaatgcgactcgagaactgg
cctcccgccagtttgaaaaacaacgactaa
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