Teredinibacter turnerae: TERTU_1091
Help
Entry
TERTU_1091 CDS
T00952
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ttu
Teredinibacter turnerae
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttu03016
]
TERTU_1091
Enzymes [BR:
ttu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TERTU_1091
Transfer RNA biogenesis [BR:
ttu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TERTU_1091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
RNase_II_C_S1
MSG_insertion
Motif
Other DBs
NCBI-ProteinID:
ACR14044
UniProt:
C5BR14
LinkDB
All DBs
Position
complement(1151484..1153451)
Genome browser
AA seq
655 aa
AA seq
DB search
MLDKDTLSRLSQLKSDIQAAKEYGVGHVAGTNGRFGFVRLEDGRDAFLSPEKMQRVIPGD
KVKVSLTKNDKDQLEATLESLLEQSLSRFLGQYRVTKKGHFVVPLGNAPGLKSSPINRWI
FLPPKSRGRCKDGDMVVARLQQHPYDDGKASARILENIGQENDPHIERLYVSAKYDLQPR
YSEPAQKQTKDIARSFKSEQFGAERTDFTEVPFVTIDAETTRDMDDAVALTVNEDSDQAR
YQLHVAIADPASFIDQHSPLAQSSHRSAQSLYLLGGTIPMLPEELANHCFSLAEGTVRPV
LSCRMDINTDGEITHAEFARATIRSRRKLDYQRVGAFLDGTADTYTDNDPQPQIATMLKQ
LAELADLRRRYRETHQIVSSDQAEYAFEVNQQGKICAVHLRERTQAHKIVEEAMLATNYS
AGQFLAKAGKGLFTTHTGFREDRLGEVKALLKEEQIEHDDIMSLDGFVTLVNKLSNDQEK
ATLLPALRRMMPTSELSLDAKGHLGIGMPHYATITSPIRRFTDLFNHWAILSELEGAKFR
NANEEYLTKLSENLNNGRLADRELQQWLICQYAESLVGETDSAKIRIVTQQGFGARLETQ
GIDGFILFDKKTEKSFDAKRMTLDVGGQVYKLEDVVKVKVDSVDMDKRRIAFSVA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcttgataaagataccctctcgcgcttatcgcaactgaaatccgatatccaggccgct
aaagaatacggtgttggccacgtggctggtactaatggacgatttggcttcgtccgcttg
gaagatggccgcgatgcgtttttgtcacccgaaaaaatgcagcgggttattcccggcgat
aaggtgaaagtcagtctcaccaagaatgacaaagaccaactggaggcaacccttgagtca
ctgcttgagcaatcgctcagccgctttctcggacaatatcgtgtcacaaaaaaaggacat
tttgttgtcccgcttggaaatgcgcctggtttaaaaagctcccccatcaaccgttggatc
tttttaccccccaaatcccgcggtcgctgcaaagatggtgatatggtggtcgcccgcctg
caacaacacccttatgacgacggcaaggcgtcagcccgtatactcgaaaatatcggccag
gaaaacgaccctcatatcgaacgcctttacgtctcagcgaaatacgacctccaaccccgc
tacagcgagcccgcacaaaagcaaaccaaagatatcgcgcgaagctttaaaagcgagcag
tttggcgctgagcgtaccgattttaccgaagtgcccttcgttaccattgatgccgaaacc
acgcgcgatatggacgacgccgttgcactgacagttaatgaagacagcgaccaagcccgc
taccagttacatgttgccattgccgacccagcgagctttatcgatcagcattctccactg
gctcagagcagccatcgcagcgcccaaagcctgtatttgcttggtggtaccatccccatg
ctgccggaagaactcgctaatcattgtttttcactcgcggaaggcacggttcgcccggta
ctaagctgccgaatggacatcaacaccgacggcgaaatcacccacgcagaattcgcccga
gcaacaatacgatctcgccggaaacttgattatcagcgcgtgggggccttcctcgacggt
accgccgacacatacactgataacgatcctcagccacagatcgcgactatgctcaaacag
ctcgcagaactcgcagatctccgccgccgctaccgcgaaacgcatcaaatcgtgagtagc
gatcaggcggagtacgcattcgaagtgaatcaacagggcaagatctgtgctgtgcatctg
cgtgagcgcactcaagcacacaagattgttgaagaagccatgctggcaaccaactacagc
gcaggccagtttctcgcgaaagccgggaagggattgttcacgactcacaccggttttcga
gaggaccgcttaggcgaagtgaaggcgctgctaaaagaagagcagattgagcacgacgac
atcatgagccttgatggattcgtcacactcgttaacaaattaagtaacgatcaagaaaaa
gcgacgctgctaccggcattgcgcagaatgatgccgacaagcgaactctctctcgacgcc
aaaggtcacttgggtatcgggatgccacactacgcaaccattacctcgcccattcgccgt
tttaccgatttatttaatcactgggcgatcctgagcgagctggaaggggccaaattccgc
aacgccaacgaggagtatctcactaagttaagcgagaacctcaataacggtcgcctggcc
gaccgagagttacaacagtggttgatctgccaatatgcggagtctctggtaggcgaaaca
gattccgcgaaaattcgaatagtaacccagcagggttttggcgcccgactcgaaacccag
ggtattgacgggttcattctgttcgacaagaagaccgaaaagtccttcgacgccaagcgt
atgaccctcgacgtaggcggacaggtatacaaactcgaagacgtggttaaagtcaaagtc
gacagcgtagacatggataaacgccgaatcgcgtttagcgtcgcgtaa
DBGET
integrated database retrieval system
