Teredinibacter turnerae: TERTU_1483
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Entry
TERTU_1483 CDS
T00952
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ttu
Teredinibacter turnerae
Pathway
ttu00040
Pentose and glucuronate interconversions
ttu01100
Metabolic pathways
ttu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TERTU_1483
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TERTU_1483
Enzymes [BR:
ttu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
TERTU_1483
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
CBM_5_12_2
CBM_35_2
Motif
Other DBs
NCBI-ProteinID:
ACR10769
UniProt:
C5BT62
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All DBs
Position
1525128..1528958
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AA seq
1276 aa
AA seq
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MNILLNRCVAMAVAMLAGSAATAVSAAPVGFAALNGGTTGGAGGQVVRASTGTEIHEALC
GRASSSTPIIIQVEGTITPGNTSKVSGSSCNTASGVIEIKEVSNVTIVGVGGGATFDEVG
IHVRSSSNIILQNLYVRDVKKSNGTTSNGGDAIGMESNVSNVWVDHVTLEAFGGESEGYD
GLFDMKANTKYVTLSYSHLKGSGRGGLIGSSSSDDENNYITFHHNFYENIHSRIPLLRHG
DAIHTYNNFFSNISGTGINSRRGAKIRVENNYFENARNPLGTFYDDVEGYWQVAGNFFAS
SVVWEEESDEHPAGPNVQSTTTVNIPYSYSLDDAGCVPQIVQTTAGANKGMLTSDGSCQS
TSSSSSSSSSSSSSSSGGSTSSSSSSTSSSSGGSGGTNLSIGAGSDGSSKASGTSYGDVR
DGDLATYWSPSSSTGRISIKWSEDTTVARVVIVEAAGSEGNIQHWELINNDTGAQISSGT
GAGTIDFNPVTLGKINFEILSSSGTPAIAEFETYASAGGSSSSSSSSSSSSTSSSSSSSS
TSASSSSSSTSGGGGSCAGINEYPDWTARDWSGGDYNHANAGDQMVYSGALYAANWYTNT
VPGSDASWTFISSCDQGGSSSSSSSSSSSNSSSSSSSSSSSSSSGGSVVSATVQENALGF
CGVDGTVDSNNGGFTGSGFANTDNANGTGIDWTITGDSGSYTLRWRYANGSDVNRSAILS
VNGVAVSTEDFVGTGSWTSWATTSVQLNLGAGYKEIRLLANQSSGLANIDYVEITGPGVA
AATCGGSSSSSSSSSSSSSSSSSSSSSSSGGIGGACDALLNDPNTNWRDTSLQTDQEIIQ
CLSSSLGQPVGFGESATGGYNANGGSELVIITNNRPEDQILAAISSPDYKWIVFDKQDFR
DEVQLMMYRPYCSNSSLQSALGLNESQCRDPYAWCSANGVGSEACLETFFNEKLNDSSLP
IRNYLIDSNTTIDGRGANATFVFNGFKIGSDSSGASTHESENVIITNNKFIGVGHVEDHD
LDPDMIRSTGESHDIWIHQNTFDTTGDSAFDVKVGAYDITVSFNKLVNVKRAALHGSSDS
RTINSQITTTIHNNLFVTTDEHYSDSRYETLRRVPLMRRGQSHMFNNVFYNYRKDILSVR
VGGRIAFENNMVLNNAVEAANNSNSDDLDYFVETLLRDFREGGLDVWGSYVWMANANCQL
QGDAGDLTKSEGSTPDMMAQYSNRSRSEITGHLLPAGQDLADYLFATAGKGGVAPWVVTG
ASSISDVVASAPGGCQ
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccttttaaaccgatgtgtagcaatggcagtagcaatgctcgccggtagcgca
gcaacggcagtttctgcagcgcctgtgggttttgcggccttaaatggcggtacgacgggc
ggcgccggcggccaggttgtaagagcaagcacaggaacggaaattcacgaggcgttgtgc
ggccgggcgtccagtagcactcccatcataattcaggttgaaggcacaattactccgggc
aataccagtaaagtcagtggtagtagttgtaataccgccagtggcgtgattgaaattaaa
gaagtcagtaatgtgactattgtgggcgtcggtggtggtgcaacattcgatgaggtgggt
atccatgtacgctcatcaagtaatattattttgcaaaacctgtacgtgcgcgatgtaaaa
aaatccaatggcacaacctcaaatggtggtgacgccattggtatggaatctaacgtgtct
aacgtgtgggtagaccacgtaactctggaagcgtttggtggcgaaagtgaaggttacgac
ggccttttcgatatgaaagccaacaccaaatacgtgaccctttcgtacagtcaccttaaa
ggctctgggcgcggcggccttatagggtcgagcagcagtgatgatgaaaacaactacatt
acgtttcatcataatttttatgaaaatattcactctcgtatcccgctgctgcgccacggc
gacgcgattcatacctacaacaacttcttcagcaatatttcaggcaccggcattaactcg
cgccgtggtgcgaagatacgtgtagaaaataattattttgaaaacgcgcgtaatccgctg
ggtacgttttatgacgacgtggagggttactggcaggtcgcaggcaacttttttgccagc
agtgtggtttgggaagaggaaagtgatgaacatccggcaggtcctaatgttcaatccact
acgacggttaatattccctacagctactcgctagacgatgccggatgtgtacctcaaatt
gtgcaaacgactgccggtgcgaacaaggggatgttaacgtctgatggttcctgccagagc
acgtcttcatcatccagtagcagctcgtcgagcagtagttccagcagtggtggctccacc
agtagcagctcgtcatcaactagctcatcttctggtggatctggcggaacgaatttaagt
atcggtgctggttcggatggttccagtaaagcgtcgggcacttcctacggtgatgtgcgc
gatggtgacctggccacctactggtcgcccagcagttcaacagggcgtatctcgataaag
tggagtgaagatacaacagtcgcgcgtgtcgttattgttgaagccgcaggaagcgaaggt
aatatacagcactgggagctgattaataatgataccggcgcgcaaatcagttccggaacg
ggcgctggaaccattgattttaatccagttactcttggcaaaataaatttcgaaatcctt
tccagcagcggtacccctgcgatcgcagaattcgaaacttatgcgagtgccggtggatcg
tcttcttcctcgagcagcagctccagttcttcaacctcttccagctccagctctagttca
actagcgcttcatcgtcatcctcgagcacaagcggtggtggcggcagttgtgctggcatt
aatgagtatcctgactggacggcgcgagactggtctggcggcgactataatcacgcgaat
gccggtgatcaaatggtctacagtggcgcactctacgcggcaaactggtataccaatacg
gttccgggcagcgatgcgtcctggacattcatttcgtcgtgcgatcagggcggttctagc
agttcttcgtcaagcagttcttcgtcaaatagttcctcatcaagtagctcatcttcaagc
agttcgtcatccggtggctcggtcgttagcgcgactgtgcaagaaaacgcccttggcttt
tgtggcgttgacggaactgtagatagcaacaacggcggatttaccggcagcggatttgcg
aacaccgacaatgctaatggcactgggatcgattggacaattaccggcgatagcgggtct
tatacgttgcgctggcgttatgccaatggttccgatgtgaacaggtcagcgatactgagt
gtaaatggcgttgcagtatctactgaagattttgtgggtaccggtagttggacctcatgg
gctactacgtcggtgcagctaaatctgggtgcggggtataaagaaatacgcttgctggca
aatcaatcatccgggctcgcgaatatagattacgtggaaattactggcccgggcgtggca
gctgcaacctgtggtggctcaagttcatccagtagctccagttcatcgagcagttcttcc
agcagtagttcatcgagcagctcttccggaggtattggtggcgcttgtgacgcattacta
aacgatccgaacacaaactggcgagatacttctctgcaaaccgatcaggaaattatccaa
tgtttgagcagcagcctcggccaacctgttggcttcggtgagagcgcaactggcggatac
aatgcgaacggcggcagtgaactggtgattattactaacaaccgcccggaagatcagatc
ctcgctgcgatttcctcacctgactataagtggatagtgtttgataaacaggatttccgc
gatgaagtgcaattgatgatgtatcgcccttactgttcgaatagcagcttgcaatcagca
cttgggttaaacgagtcgcaatgtcgtgatccttatgcctggtgttccgccaacggtgtg
ggcagcgaagcttgtttggaaacattctttaacgaaaaactcaatgacagcagcctgcct
attcgcaactatctgattgacagcaacaccacgatagacgggcgcggtgcgaatgccacc
tttgtcttcaatggctttaaaatcggttcggacagcagcggtgcctctacgcacgagtcg
gaaaatgtcattatcaccaacaataagtttattggtgtggggcatgtggaagatcacgat
ctggacccggatatgattcgctcgacgggtgaatcgcatgatatctggattcaccagaat
acatttgataccacaggtgactcggcgtttgacgtgaaagtgggtgcttacgatattacg
gtctcgttcaataagctggtcaatgttaagcgcgcagcgctgcacggttccagcgacagc
cgtaccatcaattcacaaatcacgacgactattcacaataacttgtttgtaacaacggac
gagcactacagcgatagtcgctacgagaccttgcgtcgagtgccacttatgcggcgtgga
cagagccacatgtttaataacgtgttctacaactaccgcaaagatatactcagcgtgcgt
gttgggggccgaatcgcgtttgaaaacaatatggttctgaataacgcagtcgaggcggca
aacaatagcaacagcgatgatcttgactattttgttgagaccctgctgcgtgatttccgt
gaaggaggcctggatgtgtggggcagctacgtgtggatggccaacgccaattgccagctg
caaggtgatgccggagatcttaccaaaagtgaaggctcgacgccggatatgatggcgcag
tacagcaatcgttcacgctctgagattactggccacttgttgccagctgggcaagacctg
gcagattacctttttgctaccgcaggcaagggtggcgttgcaccctgggttgttactggt
gcatcgagcatttctgatgtcgttgccagtgcgcctggcggttgccagtag
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