Teredinibacter turnerae: TERTU_1521
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Entry
TERTU_1521 CDS
T00952
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
ttu
Teredinibacter turnerae
Pathway
ttu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TERTU_1521 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ttu03000
]
TERTU_1521 (nifA)
Transcription factors [BR:
ttu03000
]
Prokaryotic type
Helix-turn-helix
Other families
TERTU_1521 (nifA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA_2
Mg_chelatase
GAF_3
AAA
HTH_23
SAPS
AAA_3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACR14572
UniProt:
C5BT95
LinkDB
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Position
complement(1581757..1583343)
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AA seq
528 aa
AA seq
DB search
MLKMNTKNSVLSPPKSVTRTELLEKEMLAVSSISQIICHSDNIEKTFQEVLQVLHEVAGM
QHGLISISDPEYSAVQVSAIYSGDGDNVKVGNVKYRSGEGIIGRILSHGNPIVLGRISAE
PNFLDRLALYDFELPFIGVPIENNEGLIIGVLAAQPDTPADDLLNERTRFMETVAHLLSQ
TVRLLINVELGEEIASERDELRREVRGKFGFENMVIGHTSSMRRVFDQARRVAKWDSTVL
VLGESGTGKELISSAIHYNSPRAKQPYVRLNCAALPETLLESELFGHEKGAFTGAIKQRK
GRFEQAHGGTLFLDEIGEISPMFQAKLLRILQEGEFERVGGTQTIRVDLRIVAATNRNLE
AEVEKGKFREDLYYRLNVMTIKIPPLRERRADIPELAEFLLSKLSDKQNRTLTLTNRAIG
MLMNYSWPGNVRELENCLERASIMSEDGSVDCDAISMTGLNQEVNPHPSHINIPPTDLTD
ENLDEREKVIAALEQAGWVQAKAARLLGMTPRQIAYRIQTLNINVRKI
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagatgaatacgaaaaattctgtgctctctccgccgaagtcggttacgcgcacc
gaacttcttgaaaaggaaatgctcgccgttagtagcatttctcagatcatatgtcactca
gataatattgaaaaaacatttcaggaagtgctgcaggtactccatgaagttgccggtatg
cagcacgggctcatctccatcagtgatccagaatacagtgccgtacaagtgtcagccatt
tatagcggggacggcgacaacgtaaaagtcggcaatgttaaataccgtagtggtgaaggg
attattggccgcatcctaagccacggtaatccgattgttcttggccgcatatcagcggag
ccgaacttcctcgaccgcttggcactgtacgatttcgaactgcccttcattggtgttccg
attgaaaacaacgaaggccttattatcggcgttctcgcggctcagccagacacacctgcg
gatgatttactcaacgaacgtacccgctttatggagaccgtggctcatctgctgtcgcaa
acagtacggcttttaataaatgtcgaattgggcgaagaaatagccagcgagcgagatgag
ctcagacgggaagttcgaggcaagttcggcttcgagaatatggttatcggccatacctca
tctatgcgacgcgtattcgatcaagcacgacgcgtggcaaaatgggatagtaccgtactg
gttctcggtgaatcgggcacaggtaaagaacttatatccagtgcaattcactacaactcg
cctcgtgctaaacagccttatgtgcggttaaattgtgcggctcttccagaaacgcttttg
gaatccgaactctttggccatgaaaaaggcgcgtttaccggcgcgatcaaacagcgaaaa
ggtcgtttcgaacaagcccacggcggtacgctcttcttagacgaaattggtgagatttct
cccatgtttcaagctaagcttctgcgaattctgcaagagggggagtttgaacgcgttgga
ggaacccagacaatccgcgtcgatctgcgcatcgtagcggccaccaatcgcaacctggaa
gctgaggttgaaaaaggcaaatttcgggaggacttgtactaccgtttaaacgtaatgact
atcaagatacctccattgcgcgaacggcgtgctgacattcctgagcttgctgaattttta
ctttccaaactgtcagacaaacaaaatcgcaccctaaccctgaccaatagagcaattgga
atgctgatgaattacagctggcccgggaacgttcgagaactcgaaaactgtcttgaacgg
gcgtcgattatgagcgaagacggtagtgtcgactgcgacgcaatttcaatgacgggctta
aaccaggaagttaaccctcatccatcccacatcaatattccgccaacagatctgacagat
gaaaacctggatgagcgcgaaaaagtcattgcagcacttgaacaggctggatgggttcaa
gccaaagcagcgcgcctcttgggtatgacacctcgtcaaattgcttatcgtattcaaacg
ctgaatatcaacgtccgcaagatttaa
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