Teredinibacter turnerae: TERTU_2108
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Entry
TERTU_2108 CDS
T00952
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ttu
Teredinibacter turnerae
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ttu01011
]
TERTU_2108
Enzymes [BR:
ttu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TERTU_2108
Peptidoglycan biosynthesis and degradation proteins [BR:
ttu01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TERTU_2108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
HTH_23
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
ACR14097
UniProt:
C5BJA3
LinkDB
All DBs
Position
complement(2193502..2195100)
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AA seq
532 aa
AA seq
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MVAIFVFSLLCACSGISVKPTQTAGVGQDVAEEPEFEFFAAEPDDDLTEQEYSALPEPTP
GDLWDRIRAGFQLQIEYNDRIDAQLRWYARHPEYMERVAQRGERYMYHIVNQVEAKGLPT
ELALLPIVESAFDPFAYSHGRASGIWQFVPGTGKMLGLKQNWWYDGRRDVVASTDAALVY
LENLNKRFDGDWLQALASYNSGSGNVSRAIRKNRKRGKPTDFWNLDLPRETEAYVPKLLA
LAILIKNPELYGLNLHSIPDQPYFVAVNTDSQIDLAQAADLAGLQMDDLYNLNPAFNRWA
TDPDGPHHLLVPFSSAEAFQAGLAQIPADHRVTWQRYTIRNGDTLSTIATKYNVSVRTLR
AINDLSNNNIRAGKTLMVPVASADARHYSQSLTQRLHNRRSASAKTADGTRVDHQVTSGD
SLWEIAKTYNVTPRQIARWNNMAPTDPIYPGQKLAIWTTLDEVQEIASNLQASKSVIRKV
SYRVRKGDSLSRIASKFSLNVNDILRWNQLNPGKYLQPGQSLTLFVDVTKAR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtggtggccattttcgttttcagcctactttgcgcatgctccggcatttcggtaaaaccc
acgcaaaccgcaggtgttggacaagatgtcgcagaggagcccgagttcgagttttttgcg
gcggagccagacgacgacttaacggagcaagagtactctgcgctgccagaaccgacgcct
ggcgacctgtgggatcggatccgcgcgggctttcagctacagattgaatataacgacagg
atcgacgcccagcttcgctggtacgcgcgccatcccgaatatatggaacgcgtagcccag
cgcggcgaacgttacatgtatcacattgtgaaccaagttgaagccaaaggcttgccgact
gagcttgcactgctccccatagttgaaagcgcattcgacccatttgcatactcgcacggg
cgagcctcggggatatggcaatttgttccaggcaccggaaaaatgctggggctgaagcaa
aactggtggtacgacgggcgtcgcgatgtagtcgcatctaccgacgcagctctcgtgtat
ctagagaatcttaacaagcgatttgatggtgactggctgcaggccctggcgtcatacaac
agtggctcaggcaacgtttcgcgcgcgatccgtaagaaccgcaagcgcggtaaacccacc
gatttttggaacctcgacttgccgcgcgaaaccgaagcctatgtgcctaagcttctcgcc
ttggcaatcctgataaaaaatccggagctgtacggcttaaatctccactcgatacccgac
caaccttacttcgttgccgttaatacagactctcagatcgacctcgcccaagcggccgat
ctggctgggctgcagatggatgatctgtacaaccttaacccggcgttcaaccgatgggcc
accgatccagatggcccccaccacctattggtacccttcagcagtgcagaagcgtttcaa
gcgggtctggcccagattcccgcggaccatcgagtcacatggcagcgctacacgatccgc
aatggagatactttgtccaccattgcgaccaaatacaatgtcagcgtacggacattgcgc
gctatcaatgacctgtccaacaacaatatacgtgcgggtaaaacgctaatggtgccggtc
gcttccgcagacgcgcgacactacagccaaagcctgacccaacgcctgcacaaccgccgc
agtgccagtgccaaaaccgcggacggcactcgcgttgatcatcaggtaacgtctggcgat
agtctttgggagattgccaaaacgtacaatgttacaccgcgtcaaattgcgcgctggaac
aacatggcgccgaccgatcccatctatccaggccagaagttagccatttggacaacgtta
gatgaggttcaagagatcgcgtccaacctccaggctagtaagagcgtaatacgaaaagtg
tcttatcgggttagaaaaggcgactcgctcagccgcatcgcgagcaaattcagccttaat
gtgaatgatatcttgcgctggaaccaactgaaccctggaaaatatttgcaaccaggacaa
tcgctaacattgtttgtggatgtaaccaaagcgcgctag
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