Teredinibacter turnerae: TERTU_2452
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Entry
TERTU_2452 CDS
T00952
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ttu
Teredinibacter turnerae
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttu03032
]
TERTU_2452 (topA)
03400 DNA repair and recombination proteins [BR:
ttu03400
]
TERTU_2452 (topA)
Enzymes [BR:
ttu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TERTU_2452 (topA)
DNA replication proteins [BR:
ttu03032
]
Prokaryotic type
DNA Topoisomerases
TERTU_2452 (topA)
DNA repair and recombination proteins [BR:
ttu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TERTU_2452 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DUF2399
CK_II_beta
RepB_C
Motif
Other DBs
NCBI-ProteinID:
ACR11386
UniProt:
C5BL17
LinkDB
All DBs
Position
complement(2724969..2727659)
Genome browser
AA seq
896 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYIVKSSVGHIRDLPTSGSAKTTTDPKARAKQAALTR
KMSAEEKEVYKQNKAREQLINRMGIDPDNDWQAHYEILPGKEKVVAELRKLADQADHIFL
ATDLDREGEAIAWHLQESIGGDPTRYRRVVFNEITKNAIQEAFKSPGMLDINRVNAQQAR
RFLDRVVGYMVSPLLWEKIARGLSAGRVQSVAVRLVSERESEIRAFIPEEYWEVKAQLDT
SKGERAKYEVKRFKDEAFKPVNEAQAMAAKSALEGAAYKVTEREDKPTKSNPSAPFITST
LQQAASTRLGYGVKKTMMMAQRLYEAGYITYMRTDSTNLSKEAVENCRTFIQQEYGDRYL
PKAPNVYSSKEGAQEAHEAHEAIRPSDVTTRPNQLSGMERDAERLYNLIWQQFVACQMTS
AEFTSSSLKVSAGDYELRARGRVIRFDGFMKVMPPVSRKEEDTLLPDVKVGDMLDLHEIL
ASQHFTKPPARYTEAALVKELEKRGIGRPSTYASIISTIQDRGYVHVENKRFYANKMGDI
VTERLIESFSDLMDYGFTANMEAALDTVAEGDKDWLDLLNEFYADFTVKLEMAQNSAAGM
RRNEPVETDIDCGNCGRKMQIRTGSTGVFLGCSGYALPPKERCKNTMNLVSGDEAVNIDE
DEDAESRQLRQKRRCKICNTAMDSYLLDEQRKLHICGRNPDCDGYEVEQGVFKIKGYDGP
LIECDKCGSDMQLKSGRFGKYFGCTNDECKNTRKLLRNGEAAPPKMDPVDMPELACEKVE
DHYVLRDGASGLFLAASQFPKNRETRAPYIKELLPHKDEIDPKYAFLFKAPTQDDNGNDA
LVRYSRKTKEQYVQTEVDGKATGWKAFYDGGKWQVSGSAKPTKAAPKAKATRKKKS
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggggaaatcactggttattgtggaatcgcccgcgaaggcgaaaaccattaacaagtat
ctgggcaaccagtacatcgtaaagtcgagcgttggccacattcgcgacctccccaccagt
ggttcggctaaaactaccaccgatccaaaagcccgggctaagcaggctgcactcacccgc
aaaatgtcagcggaagaaaaggaagtttacaagcagaacaaagcccgcgaacaattgatc
aaccgcatggggatagaccccgataacgattggcaggcgcactacgagattcttcccggc
aaagaaaaagtggtcgctgagttgcgcaaactcgcagaccaggcggaccatatctttctc
gcaacggatctcgaccgcgaaggggaagctattgcctggcacctgcaggagtcaattggc
ggcgacccaacccgctatcgtcgggtggtgtttaacgaaattaccaagaatgcgatccag
gaagcctttaagtcaccgggcatgctggatattaaccgggtaaatgcgcaacaggctcgc
cgtttcctcgatcgtgttgtcggctatatggtctcgccattgttgtgggaaaaaattgcc
cgcgggttatctgccgggcgggtccagtcggtcgcagtgcgcctggtaagcgaacgtgaa
agcgaaattcgtgcgtttatcccggaagagtactgggaagttaaagcgcagctggatacc
tcaaaaggcgagcgcgctaagtacgaagtgaagcgctttaaagacgaagcgtttaaacct
gtgaacgaagcgcaggcgatggcggcgaaatctgcccttgaaggggctgcgtacaaggtt
acagagcgcgaagacaagccaactaaatccaacccgtctgcgccgtttattacgtcaaca
ttgcagcaggcagcctcgacccgtctgggttacggggtgaaaaaaaccatgatgatggcg
cagcgtctctacgaggcgggctacatcacctacatgcgtaccgactccactaatctcagt
aaagaggctgtcgaaaactgtcgcacatttattcagcaagaatatggcgatcgttatctg
ccgaaagcgccgaatgtgtattcgagcaaagaaggcgctcaggaagcccacgaagcccac
gaagccatacgaccttccgatgttaccacccgaccaaatcagttaagcggtatggagcgg
gacgcagagcgcctttacaacctgatctggcagcagtttgtggcgtgtcagatgacatcc
gcagagtttacttccagctcactgaaagtatccgcaggcgattatgagctgcgcgcgcgc
ggccgcgtgattcgcttcgacggttttatgaaggtcatgccgccagtgtcgcgcaaagag
gaagataccctcctgccggatgtgaaagtgggggacatgctcgatctgcatgaaattctg
gcgtcacagcacttcactaagccacccgcgcgctacacggaagctgcactggtgaaagag
ctggagaagcgcggtatcggtcgtccttccacctatgcaagcattatttcgaccattcaa
gatcgtggttatgttcatgttgagaacaagcgattttatgcgaataagatgggtgacatc
gttaccgaacgattgattgaaagtttcagcgatctgatggattacgggtttacggccaat
atggaagccgcactggataccgtagccgaaggcgataaagactggctcgacctgctcaac
gaattttacgccgatttcacagtgaagctggaaatggcgcaaaatagcgctgctggcatg
cgtcgtaacgagccggttgagacggatatcgattgcgggaattgcggccgcaaaatgcag
atccgcacaggtagtacgggtgtgttcctcgggtgttcaggttatgcgctgccgccgaaa
gagcgttgcaagaacaccatgaatctcgtgtccggtgacgaagctgtcaatattgatgaa
gacgaggatgcggaatctcgccagctgcgccagaaacgccgctgcaaaatctgtaacacg
gcgatggacagctacctgctggacgagcagcgcaagcttcacatctgtggtcgcaatccg
gattgtgatggctacgaggtggagcagggcgtatttaagattaaaggctacgacgggcct
ttgattgagtgcgacaagtgcggcagcgatatgcaattgaaatcaggccgatttggcaag
tacttcggttgtaccaacgacgaatgcaaaaatacacgcaaactcttacgcaacggtgaa
gctgctccgcccaaaatggatccggtggatatgccagagcttgcctgtgaaaaagtggaa
gaccactatgtgctgcgcgacggtgccagtggcttgtttctggctgccagccagtttccg
aagaaccgtgaaacgcgggcaccgtacataaaagagttgttgccccacaaagacgaaatc
gaccccaagtacgcctttttgtttaaggcgcctacgcaggacgacaacggaaatgacgcc
ttggtccgctacagtcgcaaaaccaaagagcagtacgtccagaccgaagtcgacggcaag
gcaaccggttggaaagcgttttatgacggtggtaaatggcaggtaagcggcagcgctaag
cccaccaaagcagcgccaaaagctaaagccacccgtaagaaaaagtcgtag
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