Teredinibacter turnerae: TERTU_2739
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Entry
TERTU_2739 CDS
T00952
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ttu
Teredinibacter turnerae
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttu03016
]
TERTU_2739 (rnd)
Enzymes [BR:
ttu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TERTU_2739 (rnd)
Transfer RNA biogenesis [BR:
ttu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TERTU_2739 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ACR13375
UniProt:
C5BMI8
LinkDB
All DBs
Position
complement(3023705..3024886)
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AA seq
393 aa
AA seq
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MSEQLRKQPVQWITTAAELKACCDKWITQRMLAVDTEFMRSQTYYPITGLIQVNDGNTSY
LIDPLAFDDFTPLAELMENPGVLKVLHSCSEDLEVFHRFLGIVPKHMLDTQIASALCGYG
FSVGFGKLVHAVLGEELPKEETRSDWLHRPLSSAQIDYAAIDVEYLYKLASILVLKLKNL
GRLTWVAEDCEAMLRQFADNQAVDNSDARIKQAWRLSQRQLAILKKLAQWREEVAQRRDV
PRNRVIKEHSLLDLAQRTPDHVAQLRKLDGINERMIRTDGADLIACIQAGMDVPEHELPA
PLPRPLSGSENKWAKTVREKVSSEAERLQLAPEILLKKRDYEALTRAFMTPDDINQQIIE
ARLAEYLTGWRYNLLAAPLAKVILQSYGLAESC
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaactaagaaaacaaccggttcaatggataaccactgcagccgaattaaag
gcgtgttgcgataaatggatcacccagcgaatgctggcggtagacaccgaattcatgcgc
agccaaacctattacccgatcaccgggcttatccaggttaacgatggcaacaccagctat
cttatcgatccgctcgcgtttgacgactttacccccctggcagagttgatggaaaacccc
ggtgttctcaaggtgttgcattcctgttcggaagatcttgaggtgttccaccggtttctg
gggatagtgcccaagcatatgctggacacacagatcgcgagtgcgctgtgcggttatggg
ttttctgtgggctttggcaaactggttcacgcggtactcggcgaagagctgccgaaagag
gaaacccgctcagactggttgcaccgccccttaagcagtgcgcaaattgattatgccgct
atcgatgtggaatacctttataagctggcgtcgattttagtcctgaaattgaagaatctc
ggccggttaacctgggtggctgaagattgcgaggcgatgcttcgtcagtttgcggacaac
caagcggtcgataacagcgacgcaagaataaagcaggcgtggcgcctgtcccagcggcag
ctggcgatattaaaaaaacttgcgcagtggcgggaagaggtcgctcagcggcgcgatgtt
ccccgcaaccgcgtgattaaagagcattcattgctcgatttagcacagcgcacgccggac
catgttgcccagttgcgcaagctcgacggtataaacgagcgcatgatccggacagatggt
gctgacctgatcgcgtgtattcaggcgggtatggacgtgccggaacacgagcttcccgcg
cctctcccgcgcccccttagcggtagcgaaaacaagtgggcgaaaactgtgcgggaaaaa
gtgtccagcgaagccgagcgcctgcaactggccccggaaattttgctcaagaaacgcgat
tatgaagcgcttacccgtgcttttatgactcccgacgacattaaccagcaaatcatcgag
gctcgtctggccgagtatttgaccggctggcggtacaatttgctagccgcgcctttggca
aaagtcattttgcaaagctacgggttggcggagtcctgctaa
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