Teredinibacter turnerae: TERTU_3215
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Entry
TERTU_3215 CDS
T00952
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ttu
Teredinibacter turnerae
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttu03016
]
TERTU_3215 (truB)
Enzymes [BR:
ttu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TERTU_3215 (truB)
Transfer RNA biogenesis [BR:
ttu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TERTU_3215 (truB)
Prokaryotic type
TERTU_3215 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ACR12800
UniProt:
C5BPV7
LinkDB
All DBs
Position
complement(3565464..3566405)
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AA seq
313 aa
AA seq
DB search
MGRRRKFGRPLHGVVVIDKPAGMTSNDVVQKAKRLFFANKTGHTGALDPLATGVLPLCFG
EATKFSQYLLDSDKAYKSTFCFGVSTDTADADGQTLSTTDASALTADRVRQAMTAYLGDI
DQVPPMYSALKKDGQPLYKLAREGIEVEREARPVTILEYELLAFRPGVVAEADVYIACTK
GTYVRTLAEDLGRDLQVGAHVAKLRRVQAGPFSESQALDLEALELERGEDRAEALDHHLL
PVDAPVEALPRLDLDEHSAFYFSRGQAVINNQVYRLGDEGDTVRVFDANEQFLGVAEITD
DGRVAPKRLVQYG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttggggcgtcgacgtaagtttggccgtcccttgcacggcgttgtagtaatagataaaccc
gctggtatgacctcgaacgatgttgtgcaaaaagcgaagcgtttgttttttgcgaataag
acaggtcataccggagcgctcgatccactcgctacaggcgtgctccctctctgttttggt
gaggcgactaaattttcccaatacctgctggattcggataaagcgtacaaaagtaccttc
tgctttggtgtgagtaccgatactgcggatgcggacggccagactctcagcactacagac
gcctcagcgctgacagcggatcgggttcggcaagcgatgacggcgtacttgggtgatatt
gatcaggtcccacccatgtattccgcgcttaaaaaagatggtcaaccgctttataaactg
gcgcgagaaggcattgaagttgaacgcgaggcgcgcccggtgactattcttgaatatgaa
ttgctggcgttccgtccgggggtggtcgcggaggctgacgtatatattgcctgcaccaaa
ggcacttacgttcgaaccttagcggaagatcttgggcgcgatttacaggttggcgcgcat
gtagcgaaattacggcgtgttcaagcggggccttttagtgaatcacaggcattggacctg
gaggcgcttgagctggagcgcggtgaggatcgcgctgaggctctggatcatcacttgctt
ccagtcgatgctccggtggaagccttaccaaggctggacctggacgagcattcggcgttt
tacttttctcgagggcaggcggttatcaataaccaagtctaccgtttgggggatgaaggt
gatacagtgcgcgtctttgacgctaatgaacaatttttaggcgttgcggagatcacagac
gatggccgcgtggcgcctaaacgcttggttcaatatggctaa
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