Teredinibacter turnerae: TERTU_3450
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Entry
TERTU_3450 CDS
T00952
Name
(GenBank) thrombospondin type 3 repeat family protein
KO
K20276
large repetitive protein
Organism
ttu
Teredinibacter turnerae
Pathway
ttu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TERTU_3450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
DUF4347
Cadherin_3
Big_9
OmpA
Cadherin_4
RibLong
Cadherin_5
Ig_SIBA-E_2nd
Cadherin
OmpA_membrane
OprF
SIBA-E_N
Crass_capsid
Motif
Other DBs
NCBI-ProteinID:
ACR12880
UniProt:
C5BQV0
LinkDB
All DBs
Position
complement(3809594..3819127)
Genome browser
AA seq
3177 aa
AA seq
DB search
MFKNWHLKQLKAAALFLVALTPMRNALADENDLVVIDPQVDEWQAMVSDLGDDTQVLMLK
QGTNPFAQIRDALAARSAPVSRLHLVSHGAAGELFLGGQLIDSVSLPSYGRDLAEMGQQL
TPGADWYVYGCDVAAGRDGEHFLTAMSDYSGLDVAASMDRTGASALGGNWTLEYERGEVQ
PQALFSARFQQQYQAVLSHFRGGSMSWRLVDADGDTQLDDLELTVKSAWRWNSMSPPSNS
SLIVSGTDQPLTFVQTSDEVVYVNGEYNAPGDTTPTTADYALSTRTFTANDIPQGQAFLI
RWNGGARISDLRNNADGNWNIQTLVNTSNGNLAPKIDLPIIYEVPQLQSDGVSTLQSYTF
PVTSTDPNADKMRFRLATEDELGGLAGGYVNPTGFTINTNTGVVTWNDSGTLTPGLYSAG
IVVEDVRADGTVISKSHVDFILDLQPKAAVPFEVSNNIPESRNVIVEKGDSYNFQITGTA
VDVSSLGTLQGTLTESSTVDGDFTFAPGAIGTGLDPGTYPITFEIYDTSDARSKSYLILN
FIVPDPLAPRLQNVESDTITYASTDAQLVDVDSDAILTDRDNGGNPVTHLNNGLLRFNVS
FADGEYEVLGFTSEGDGPGQFRRDGYEIYYEGSKIADIDTYEDGVGNALRIQFGTVSTAT
VQALVRKLTYNDTFVLRASGRRNLSLYVQDGDGLARNYSLYVDVQEHPEKPATSGPVVVN
NHLHLRNVADNVITSNDLQFADADTDPSNVTIVINSTPNGIFWRLGAPTVAITSFTQQEV
NDGKIYYDHRTGPYAPPEVNLSATDGTTPAGPYDSEISFTSNDNSAYTLDENTTSVGLVP
VHGESGTVTYSLIPYPDYNQGDLFNVNPNSGALSFKVAPDYENPVMSGIPNQYKLAVQVI
GSASSGHVQKITVDVRDVNEAPVITGTPAASVRVPASYSFTPTATDPESDAISWSIANKP
SWMSFDTSTGALSGSPSDSDVGSYTYIFIIASDGNLNSHITLDIDVVERNYAPVIIVEGK
STAENTPFSYTPTVADGNSGDVLTYSITNKPAWASFNTATGEISGTPGFDDAGAYNGIQI
TVDDANGGVTQSDAFQIFVTDTNRAPTISGTPATTGSEGVAYSFVPTGFDPDGDRLAFSV
LNLPPWASFDDTTGTVSGAPGFTDSGTYSNIIVGVNDLRSGVDTLPAFSIVVAEVNRAPT
LSGTPAVSVAEDASYSFAPVVNDPDTDNTLTLSITNKPSWASFNTTTGALTGKPGFEDAG
TYSGIVISVVDNLGEGNSLPAFTITVTNTNRAPTITGVPATSVTEASNYSFVPSATELDS
SDSVSGFSITNKPAWASFNPTTGELSGTPGYEDAGSYNGIVISVTDTVGGTSSLPAFSIT
VADLNREPVISALPPGQPIAEAETYTYAATATDADSDILTYSIVNKPSWASFNTATGVLT
GTPGYDDAGRYDGIVIEALDGKGGRAAVGPFGIQVQNTNRLPTISGTPLPTIAEGQPYSF
TVSATDPDTGARLSYRGEYLPSWLSVDPTTGTVTGTPGYEDAGTYANVAIIVEDELGGRD
TLGPFAITVTDTNRAPTIAGTAPGSTDEGGSFYFTPTASDPDSDPLTFAVSNKPSWAQFN
SNTGVLSGTPGYLDAGQYAGITVTVSDGRGGSAVFGPFSVDVNNLNRAPTISGTAAPKGT
EKLAYSFTPSVVDPDTDDVHTFSVTNKPAWASFNTATGMLSGTPQDGDEGTYSGIVISVD
DGKGGSDALAPFAIQIDNDNTAPVASGISANIVEDQPYEVTITAQDGENDPLTFIVVDQP
EHGTLTGTGPKFVYTPNLDYVGADQFTFRVSDGELQSDLTTASFNVEADLDGDKIIDDLD
SDVDGDGIPNAEDGSGDSDDDGIIDSRDTDSDNDGIPDSVEGAEDQDQDGIPNHQDLDSD
GDNLPDALEGTVDSDEDGTPDYLDTDSDNDGISDLIEGAEDSDKDGTPDYLDSDSDNDGI
SDKDEGADDIDNDGIPNYLDDDADNDGMKDADEGTADSDGDGTPDYLDTDSDNDGISDKD
EGATDSDNDGTPDYLDTDSDNDGISDKDEGADDIDNDGIPNYRDDDSDNDGMSDKDEGSA
DSDNDGTPDYLDSDSDNDGISDKDEGSADSDNDGLPDYLDSDSDNDGISDKDEGSADSDN
DGTPNYRDEDSDGDGIPDADESQADSDGDNIPDFIDTDSDNDGISDSEEGARDSDNDGVS
DYLDTDSDNDGIDDKDESTGDSDGDGTPDYLDTSIDEDGDGIPDIIEGAGDDDGDGIPNY
ADIDSDNDGILDNQEEGISGKDSDNDGIDDSFDVDETGGVDLDNDGIDDGYVLRDTDEDG
IPDMLDPDSDGDGIPDALEAVREPVDSDNDLIDDRFDVDQTGGIDTDGNGIDDRFDAGQT
GGPDADNDGIDDTTVPQADADHDGIPDYLDSDSDNDGIPDSVEAGNTGNDTDGDGIDDQY
DADFTGGADLNGDGVDDDAALRDSDGDGIPDLRDLDSDNDGFFDVDEAGYPDLDENGMVD
DESLVTGPALDSDNDGIPDYLDLDSNNDGINDIEGNAAHVLDEDGDGRIDNMVDSDQDGI
HDLLDQQPNAFGSGSDKDHDSVPAGLDRDQDGDGISDAVEGMGDLDNDGLADALDLDSDN
DGLPDSLETDRPAPTGVDTDFDGIDDAYDVDVTGGVDADGDGVDDRFQEVDTDGDGLPDY
RDLDSDNDGIPDSEEQLLVPLTGMDSDSDGIDDAVDVDNTGGVDANNDGVDDALVVTTDF
DNDGLPDYRDTDSDNDGVLDGDENGDFNNDGIVDRLQVDNGVETGVNGGGSFGLWLLMMM
GALVLVKRRASRPLLVVALLLASVAGRAAECDYSSAYRQAGCWYLGLGAGVSKLEPEPTD
ATSWQVNDSSSNAVGVFAGLRLSDHLFAELSHYDLGTATLSSVNPSITLEPEIDYSITGL
SAGYWLRNYGARLNAFVKVGLQTLDTTSTNISHQNNSTQFTLGVGGEWLISEKWFARVSL
DSYDKDAQAATLSVARYLGKASPKPAKAEPVAAAPADADNDGVIDADDQCPQTPEGVAVN
HFGCPEISPVTVHFAFNSAVLSAETQAQLDALAQGVAAANYDFRVKIAGHADWVGSEAFN
QGLSEKRANAVANYLSERLQLNAEKWDTRGYGEVKPVADNNSAQGRAQNRRVEITFK
NT seq
9534 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaattggcaccttaaacaactaaaagctgcagcgctgtttcttgtcgcttta
acgcctatgcgcaacgcactggcagacgagaatgatcttgtagttatcgacccgcaagta
gatgaatggcaggccatggtgtctgacctgggcgatgacacacaagttttgatgctgaaa
caaggaaccaacccgttcgcgcaaattcgcgatgcactggccgcgcgttctgcgccggtg
agtcgcttgcacctggtatcgcacggtgcagctggtgagctttttctggggggccagctg
attgacagcgtatctttgccttcttacgggcgagacctggcggaaatgggccagcaactc
acacctggcgccgactggtatgtgtatgggtgcgacgtggcagctggccgggatggcgag
cactttttgacggcgatgtcggattactctggtctggacgtggcagcatctatggaccgc
accggcgcttctgcgttggggggaaactggacgctcgaatatgagcgcggtgaagttcaa
ccgcaagcgctgttttcagcccgtttccagcagcagtatcaggcggtattgagtcacttc
cgtggtggttccatgagctggcgcctggtggatgccgatggcgatacccagttggacgac
ctcgagttgacggtaaaatccgcctggcgttggaattctatgtcgccgcctagcaatagc
agccttatcgtgagtggtaccgatcagcctttaacgtttgttcagacgtctgatgaagtg
gtgtatgttaacggggaatacaatgctcctggcgatactacccccacaacagccgattat
gcgttaagcacacgcacgtttacggctaacgatataccgcaagggcaagcctttctgatt
cgctggaatggtggcgcccgcattagtgatttgcggaacaatgcggatggtaattggaat
atccagacgttggtgaataccagcaatggcaaccttgcgcccaagatcgatctgccgatt
atttacgaagtgccgcaactgcagtcggatggtgtgagcacgttgcagagttacaccttc
ccggtgacctcaaccgaccccaatgccgataaaatgcgctttcgtcttgcgacagaagac
gagctcggtggtcttgccgggggttacgtaaaccctaccggttttacaatcaacactaat
accggtgttgttacctggaacgattcagggaccttaacaccgggtctgtacagcgccggc
attgtagttgaagacgtgcgggccgacggcacggttatctccaagagccacgtcgacttt
attctggatctgcaacccaaagcggccgtgccgtttgaggtgagcaacaatattccagaa
agtcgtaacgttattgttgaaaagggcgactcttataatttccagattaccgggactgcg
gttgatgttagcagcctgggtaccctgcaaggtacgctgaccgaatcgtccacggtcgac
ggggatttcacctttgccccgggcgcgattggcaccggtctagatcctggcacctacccc
attacgttcgaaatctatgacacctcagacgcccgctcaaagagctatctgattctgaac
ttcatcgtgcccgatcctctggcgccacgcctgcaaaatgtggagtcggatacaatcact
tatgcgagtacagatgcgcaattggtggatgtcgatagcgatgcgattctcaccgataga
gacaatggcggtaacccggtcactcacctcaataacggcttgttgcgttttaacgtctcc
tttgctgatggtgaatatgaagtgttgggtttcacgtctgagggggatggcccgggtcag
ttccgtcgcgacggctacgaaatttattatgaaggcagcaaaatcgctgatatcgacacc
tacgaggacggtgtgggtaatgcattgcgcattcagttcggcactgtttcaacagcgact
gtgcaagcactggtgcgtaaacttacttataacgacacttttgttttacgtgccagcggt
cgtcgcaacctctcgctctacgtgcaggacggtgacggtttagcgcgcaactactcgctg
tatgtggatgtgcaagagcatccggagaagcccgcaacaagtggcccggttgtggtgaac
aaccacctgcacctgcgcaatgtggccgataacgttattacctcaaacgacttgcagttt
gcggacgcagacaccgatccaagtaatgtaacgattgttataaattctacgcccaacggt
atattctggcgccttggtgcgcctacagtggcgatcaccagcttcactcagcaggaagtg
aatgatggcaagatttattacgatcaccgcaccgggccttatgcgcccccggaagttaac
ctgagtgctaccgatggcacaacacccgctggcccctacgattctgagatcagctttacc
agcaatgacaactccgcatacaccctggatgaaaacaccacttcggtagggcttgtgcct
gttcacggcgagtcgggcacggtaacctattctttgattccataccctgactacaaccag
ggcgacctgtttaacgttaatccgaattcgggtgccttgtcattcaaggttgcgcctgat
tacgaaaacccggtgatgtcggggataccaaaccagtacaagctcgcggttcaggtgatt
ggttctgcgtctagcggccacgttcagaaaattacggtggacgtgcgagatgttaacgaa
gcaccggtgattaccggtaccccggcagcaagtgttcgcgtgccagcaagctacagcttt
acgccgactgcgaccgacccggaaagtgatgctatttcctggagtattgcgaataaacca
agctggatgtctttcgatacgtctactggcgcgctgtctggatcaccgtcggactctgac
gttggctcttacacctacatattcatcatcgcgtcagatggcaacttaaattctcatatc
actctcgatatagacgttgttgagcgcaattacgcgccggtaattattgttgagggcaag
agtaccgctgaaaatacgccgttcagttacactccaacggtggccgatggcaacagtggc
gatgtcctgacttactccatcactaacaagccggcctgggccagttttaataccgctacg
ggtgaaataagtggcacccctggttttgacgatgcaggcgcctataacggcattcaaatc
accgttgatgatgctaacggtggcgttactcagagcgacgcatttcagattttcgttacc
gataccaatcgggccccaacaatttctggtactccagcaactaccgggtctgaaggcgtc
gcgtacagttttgtcccgaccggtttcgatccggacggggaccgcctggcttttagcgta
ctcaacctgccaccgtgggcgagcttcgacgatactaccggtaccgtgagtggcgccccg
ggcttcaccgactcaggtacctacagcaacattattgttggtgtgaatgatttgcgcagc
ggcgtggataccctgcctgcatttagtatcgttgttgctgaagttaaccgggcgccgacc
ttgagcggaacaccggctgtcagtgttgcggaggatgcgagctacagctttgcgccagtg
gttaacgatccggataccgacaatacccttaccttgagtattactaacaagccgagctgg
gcgagctttaacaccaccaccggtgcgctgaccggtaagccaggctttgaagatgccggg
acttacagcggcattgttatctcagtggtggacaaccttggcgaaggcaatagtctccct
gcgttcaccattacggttaccaatactaaccgcgcaccgactattaccggtgtgcctgcc
accagcgtaaccgaagccagcaactacagctttgtaccgagcgcgaccgagttggattcc
agcgatagtgtcagtgggttcagcattaccaacaaacctgcttgggccagctttaatcct
acgacgggtgagttgtctggtacaccaggttatgaggacgcgggtagctacaatggcatc
gttatttcagtaacggatactgtgggcggtaccagcagtttgcctgcgtttagcatcact
gttgccgatctcaaccgcgagccagtgatcagtgcactcccacccggccagccaatcgct
gaagcggaaacctatacctatgccgccacggcgaccgatgcagatagcgatatcctgacc
tatagcatcgttaacaaaccctcctgggcgagtttcaatactgctaccggtgtattgacg
ggcacgcccggttacgacgatgccggtcgctacgatggcatcgtgattgaggcgctcgat
ggtaaaggcggacgtgccgccgtggggccattcggtatccaggtgcagaataccaaccgc
ctgcctaccattagcggtaccccgctacccaccattgcagaagggcagccgtacagcttc
acggtatcagcaaccgacccggatactggtgcaagactgagctatcgcggtgaatacctg
ccttcctggttgtcggttgatccgacgacagggacggtcacgggtacacctggctatgaa
gacgcgggtacttacgccaatgtggcgattattgtagaagacgaattgggcggcagggat
accctgggcccgttcgccatcaccgtaaccgacaccaaccgtgcgccgaccattgcgggc
actgcacctgggtcgactgacgaagggggctccttctacttcacgccaacggcgagtgac
ccggatagcgacccgctgacttttgcagttagcaacaaaccttcctgggcgcagttcaat
tccaataccggtgtgctcagtggtacgcctggctatctggacgcgggtcagtatgcgggt
attaccgttaccgtatccgatggtcgcggcggcagtgctgttttcgggccatttagtgtt
gatgtaaacaacttgaaccgcgctccgaccatttccggcaccgcggcgcccaagggcaca
gaaaagctggcctacagctttacccccagcgttgtggacccggataccgacgatgtacac
accttcagtgtgaccaacaagcccgcctgggcgagctttaacaccgccaccggtatgctg
tctggtacaccgcaagacggtgatgaaggcacctacagcggtattgtgatcagcgttgac
gatggcaaaggtggcagtgatgcgctggcgccgttcgctatccagatcgacaatgacaac
accgcacctgtggcgagtggtatcagcgcaaacatcgttgaagaccagccctatgaagtg
actatcactgcgcaggacggggaaaacgacccgctgacctttattgtggtggatcagcct
gaacacggcaccctcactggcaccgggcctaagtttgtctacaccccgaacctggattac
gtgggcgccgaccagtttaccttccgtgtatcggacggtgaacttcagtccgacctgacc
acagcaagctttaatgtagaagcggatctggacggtgacaaaatcatcgatgatctggat
tcagacgttgacggcgacggtattcccaacgcggaagatggttctggcgatagcgacgat
gacggcattatcgactcgcgcgataccgattcggataacgacggtattcccgatagcgta
gaaggtgcggaagatcaggatcaagacggtatacccaaccatcaggatctggactccgac
ggcgataatctgccggacgcgctggaaggcaccgtggactctgacgaagacggcaccccg
gactacctggataccgacagcgataacgatgggatcagcgacctgattgaaggtgcggaa
gacagcgacaaagatggcacgccagactacctggatagcgattccgacaacgacggcatc
agcgataaggacgaaggcgctgacgacatcgataacgacggtatcccgaactatctggac
gacgacgccgataacgatggcatgaaagacgccgacgaaggcaccgcggattctgacgga
gacggcaccccggattacctggataccgacagcgacaacgacggtatcagcgataaggac
gaaggtgctaccgactccgataacgacggcaccccggactatctggataccgacagcgac
aacgacggcatcagcgataaagacgaaggtgctgacgatatcgataacgacggtattccg
aactatcgggatgacgacagcgacaacgacggcatgagcgataaggacgaaggttcagcc
gattccgataacgacggtacaccggactacctggacagcgattccgacaacgacggtatc
agcgataaggacgaaggttcagccgattcggataacgacggtctgccggactatctggac
agcgattccgacaacgacggtatcagcgataaggacgaaggttccgctgattcggataac
gacggcaccccgaactatcgcgacgaagactcggatggcgacggtattcccgatgcggac
gagagccaggccgatagcgatggcgacaacatccctgactttattgataccgacagcgat
aacgacggcatcagcgatagcgaggaaggtgctcgcgacagcgacaacgacggtgtgagc
gattacctggacacggattccgacaacgacggcatcgacgataaagacgaaagcactggc
gacagcgatggcgacggtaccccggactacctggataccagcatcgatgaagacggtgac
ggcattcccgatattatcgaaggtgctggcgacgacgatggcgacggtattccgaactac
gcggacatcgattccgacaacgacggtattctggacaaccaggaagaagggatttccggc
aaggacagcgacaacgatggtatcgacgactcgtttgacgtcgatgagaccggtggcgtg
gacctggataacgatggcatcgacgacggctatgtgctgcgcgataccgacgaagacggc
atccccgatatgctggacccggactctgacggcgacggtattcccgatgcgctggaagcg
gtgcgtgaaccagtggattccgataacgatctgatcgacgaccgtttcgacgtggaccaa
accggcggtatcgacaccgacggcaacggcattgatgatcgcttcgacgctggccaaacg
ggcggcccggatgcggacaacgatggtatcgatgacaccaccgtgccgcaggcggatgcg
gaccacgacggtattccggattacctggattccgacagtgacaacgacggcattccagac
agtgttgaagcgggtaacaccggcaacgacaccgatggtgatggcattgacgatcagtat
gatgcggacttcactggcggtgcagacctcaacggcgacggtgtcgacgatgacgctgcc
ttgcgagattccgatggcgacggtatccctgatctacgcgatctggattccgacaacgac
ggcttcttcgatgtcgacgaagcgggctacccggatctggacgagaacggcatggtggat
gacgaaagcctggtcactggacctgcgctggactctgacaacgatggcattccggactat
ctggacctggacagcaacaacgatggcattaacgacatcgaaggcaacgctgctcacgta
ctagatgaagatggcgacggccgcattgataacatggtcgactccgatcaggacggtatc
cacgatctgctggatcaacagccgaacgcgtttggctcgggttctgacaaagatcacgat
tccgtacctgctggtttggatcgcgaccaggatggcgatggtatctccgacgcggtagag
ggcatgggtgacctggataacgacggtctcgctgatgcactggatctcgatagtgacaac
gacggtctgccagacagcctggaaaccgatcgcccggcacctaccggtgtagacactgac
ttcgacggtatcgacgatgcctatgacgttgatgtgaccggtggtgtagacgcggacggc
gacggtgtcgatgaccgcttccaagaggtagatactgatggcgatggcctgccggattac
cgcgatctggacagcgacaacgacggtatccccgatagtgaagaacagctgctggtaccc
ttgaccggtatggatagcgacagcgacggtattgacgacgcagtcgacgtagataatacc
ggtggtgtagatgccaacaacgatggcgttgacgatgcgttggtggtgactaccgacttc
gacaacgacggtcttccagattaccgtgacaccgacagcgataacgacggtgtactggac
ggtgatgaaaacggcgacttcaacaacgacggcattgtcgatcgtctgcaagtggacaac
ggtgttgaaaccggtgttaacggtggtggctcgttcggtctctggttgttgatgatgatg
ggtgcgctggtgctggttaagcgccgcgcctcccgtccgctgctggtggtagctctgtta
ctggcgtccgttgccggtcgcgccgcagagtgcgactacagcagcgcctatcggcaggcg
ggatgctggtacctgggtttgggcgcaggtgtcagtaagcttgagccagaacctactgac
gctaccagctggcaggtcaatgacagttccagcaatgcagtcggtgtgttcgccggattg
cgcttgagcgatcacctgtttgctgagctgagtcactacgatctgggaacggcaacccta
tccagcgtaaaccctagcattacactggagccggaaatcgactacagcattaccgggctt
tccgctggctactggttgcgcaactacggcgcacgtttgaacgctttcgtgaaagtcggc
ctgcagaccctggatacaacctcgaccaatatttctcaccagaataacagcacccagttc
actctgggtgtgggtggcgaatggttaatcagcgaaaaatggtttgcacgggtatcgctg
gattcatatgacaaggatgcccaggcggcgactttgagtgtggcgcgctatcttggcaag
gccagtcccaagccagccaaagcagagcctgtggcggcggcacctgcagatgccgacaac
gacggtgttattgacgccgacgaccagtgcccacaaacaccggaaggtgttgcggtgaat
cactttggttgccctgaaatttcgccggttactgtacattttgcgtttaactccgccgtt
ttgagcgcagaaacccaggctcaattggatgccttggcacaaggtgtagcggccgcgaac
tatgatttccgcgtaaaaattgcgggtcatgcggactgggtcggcagcgaagcctttaac
caggggctttccgaaaaacgcgcgaatgccgttgcgaactacctcagcgagcgtctgcaa
ctgaatgcagaaaagtgggacactcgaggttacggcgaagtgaaacccgttgccgacaat
aactcggctcaaggtcgggcgcaaaatcgccgtgtcgagatcacgttcaaatag
DBGET
integrated database retrieval system
