Teredinibacter turnerae: TERTU_3821
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Entry
TERTU_3821 CDS
T00952
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ttu
Teredinibacter turnerae
Pathway
ttu02020
Two-component system
ttu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TERTU_3821 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TERTU_3821 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttu03021
]
TERTU_3821 (rpoN)
Transcription machinery [BR:
ttu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TERTU_3821 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ACR13954
UniProt:
C5BSX3
LinkDB
All DBs
Position
4216419..4217954
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AA seq
511 aa
AA seq
DB search
MKQSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLQAEIQEALDSNPMLEVEEDLSGDDSHS
GINEQAPASNELNGKDSADGKSDAADANGADQESNSDASSDGDWNEDNIPTDLAVDTSWD
DIYDPTPSGTGLAKPDSDDYDFESRRGTSETLQDHLQWQLNLTPMSVRDKDIAEAIIDAV
KPNGLLGQTLDEIFHGLEPHHEELEMDEVVAVLHRVQQFDPPGVLSQDVRECLLIQLSQL
DISNEDVRNAKTLVSEFLDLLGGRDFKQLMRKLKLKESELQAAVQVIQGLNPRPGEQIGS
DDTEYVVPDVFVNKVNNRWMVQLNPDIAPRLRINSDYASLVKRADSSADNTFLRDNLQEA
RWFLKSLQSRNETLLKVASCIVEKQQGFLDFGPEAMKPMVLHDVAEIVEMHESTISRVTT
QKYMHTPQGIFELKYFFSSHVATDSGGECSSTAIRAIIKKLVAAENARKPLSDSKITGLL
AEQGIKVARRTIAKYRESLNIPPSNERKRLV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatccctccagttaaaactgggccagcagctcaccatgaccccgcagctgcaa
caggccatcaggcttcttcagctctccacgctcgatcttcaggcagaaatacaagaagct
ctggattcaaaccctatgctcgaagttgaggaagacctcagcggcgacgactctcacagc
ggtatcaatgaacaggctccagccagcaacgagcttaatggcaaggacagcgccgacggc
aaaagcgatgctgcagatgcgaatggcgccgaccaggagtccaattccgacgcatcctcc
gacggtgattggaacgaagacaacattcccactgaccttgcggtcgacaccagctgggac
gatatctacgaccccaccccgagcggcaccggactcgcaaaacccgactccgacgattac
gattttgaatcccgacgtggcacatcagaaacgctgcaggatcacttgcagtggcagctg
aaccttacccccatgtcagtccgcgacaaggatatcgccgaagccatcattgacgcggta
aaacccaacggtctgctcggccagactctggatgaaatttttcatggcctggaacctcac
catgaagaactcgaaatggacgaagtggtggctgtactccaccgggtgcaacagtttgac
ccacccggcgttctcagccaggacgtacgtgaatgcctgctcattcagctgagccagctt
gatatcagcaacgaagatgtgcgcaacgcaaaaacgctcgtcagcgagtttctcgatctg
ctcggcggccgcgacttcaaacagctgatgcgcaagctaaaactgaaagaaagcgaacta
caggcggcggtacaggttatccagggattgaacccgcgacccggtgaacagattggcagc
gacgacacagagtatgtggtgccggatgtgtttgtgaacaaggtaaataaccgctggatg
gtgcaactcaacccggatatcgcaccgcgtttacgcattaacagcgactatgcgtcactg
gttaagcgcgccgactccagcgctgacaacacttttctacgcgacaacttacaggaagcg
cgctggtttttgaaaagcctgcaaagccgcaacgaaaccctgttgaaagtcgccagctgt
atcgtggaaaaacaacaggggtttctcgatttcggcccggaagccatgaaaccgatggta
ttgcacgacgtggcagaaattgtcgaaatgcacgaatcgacgatctcgcgagtaaccacg
caaaagtacatgcacaccccacaggggattttcgagctcaaatactttttctccagccat
gtggccacagattccggcggcgagtgctcatctaccgcaattcgcgctatcattaaaaaa
ttagttgctgcggaaaatgcacgcaaaccgctcagcgactcaaaaattacagggctattg
gcagaacagggaatcaaggtcgcacgccgcaccatcgctaagtatcgcgagtctctgaac
atacctccctcgaacgaacgcaagcgtttggtatag
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