KEGG   Teredinibacter turnerae: TERTU_3821
Entry
TERTU_3821        CDS       T00952                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ttu  Teredinibacter turnerae
Pathway
ttu02020  Two-component system
ttu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ttu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    TERTU_3821 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    TERTU_3821 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ttu03021]
    TERTU_3821 (rpoN)
Transcription machinery [BR:ttu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TERTU_3821 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: ACR13954
UniProt: C5BSX3
LinkDB
Position
4216419..4217954
AA seq 511 aa
MKQSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLQAEIQEALDSNPMLEVEEDLSGDDSHS
GINEQAPASNELNGKDSADGKSDAADANGADQESNSDASSDGDWNEDNIPTDLAVDTSWD
DIYDPTPSGTGLAKPDSDDYDFESRRGTSETLQDHLQWQLNLTPMSVRDKDIAEAIIDAV
KPNGLLGQTLDEIFHGLEPHHEELEMDEVVAVLHRVQQFDPPGVLSQDVRECLLIQLSQL
DISNEDVRNAKTLVSEFLDLLGGRDFKQLMRKLKLKESELQAAVQVIQGLNPRPGEQIGS
DDTEYVVPDVFVNKVNNRWMVQLNPDIAPRLRINSDYASLVKRADSSADNTFLRDNLQEA
RWFLKSLQSRNETLLKVASCIVEKQQGFLDFGPEAMKPMVLHDVAEIVEMHESTISRVTT
QKYMHTPQGIFELKYFFSSHVATDSGGECSSTAIRAIIKKLVAAENARKPLSDSKITGLL
AEQGIKVARRTIAKYRESLNIPPSNERKRLV
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgaagcaatccctccagttaaaactgggccagcagctcaccatgaccccgcagctgcaa
caggccatcaggcttcttcagctctccacgctcgatcttcaggcagaaatacaagaagct
ctggattcaaaccctatgctcgaagttgaggaagacctcagcggcgacgactctcacagc
ggtatcaatgaacaggctccagccagcaacgagcttaatggcaaggacagcgccgacggc
aaaagcgatgctgcagatgcgaatggcgccgaccaggagtccaattccgacgcatcctcc
gacggtgattggaacgaagacaacattcccactgaccttgcggtcgacaccagctgggac
gatatctacgaccccaccccgagcggcaccggactcgcaaaacccgactccgacgattac
gattttgaatcccgacgtggcacatcagaaacgctgcaggatcacttgcagtggcagctg
aaccttacccccatgtcagtccgcgacaaggatatcgccgaagccatcattgacgcggta
aaacccaacggtctgctcggccagactctggatgaaatttttcatggcctggaacctcac
catgaagaactcgaaatggacgaagtggtggctgtactccaccgggtgcaacagtttgac
ccacccggcgttctcagccaggacgtacgtgaatgcctgctcattcagctgagccagctt
gatatcagcaacgaagatgtgcgcaacgcaaaaacgctcgtcagcgagtttctcgatctg
ctcggcggccgcgacttcaaacagctgatgcgcaagctaaaactgaaagaaagcgaacta
caggcggcggtacaggttatccagggattgaacccgcgacccggtgaacagattggcagc
gacgacacagagtatgtggtgccggatgtgtttgtgaacaaggtaaataaccgctggatg
gtgcaactcaacccggatatcgcaccgcgtttacgcattaacagcgactatgcgtcactg
gttaagcgcgccgactccagcgctgacaacacttttctacgcgacaacttacaggaagcg
cgctggtttttgaaaagcctgcaaagccgcaacgaaaccctgttgaaagtcgccagctgt
atcgtggaaaaacaacaggggtttctcgatttcggcccggaagccatgaaaccgatggta
ttgcacgacgtggcagaaattgtcgaaatgcacgaatcgacgatctcgcgagtaaccacg
caaaagtacatgcacaccccacaggggattttcgagctcaaatactttttctccagccat
gtggccacagattccggcggcgagtgctcatctaccgcaattcgcgctatcattaaaaaa
ttagttgctgcggaaaatgcacgcaaaccgctcagcgactcaaaaattacagggctattg
gcagaacagggaatcaaggtcgcacgccgcaccatcgctaagtatcgcgagtctctgaac
atacctccctcgaacgaacgcaagcgtttggtatag

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