Teredinibacter turnerae: TERTU_3840
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Entry
TERTU_3840 CDS
T00952
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ttu
Teredinibacter turnerae
Pathway
ttu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TERTU_3840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttu03019
]
TERTU_3840
Enzymes [BR:
ttu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TERTU_3840
Messenger RNA biogenesis [BR:
ttu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TERTU_3840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACR14063
UniProt:
C5BSZ2
LinkDB
All DBs
Position
complement(4237030..4238310)
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AA seq
426 aa
AA seq
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MCLLLRMCTKPPLILNFSGTTNAMSDDTHSAVPSDKPAPKIAFSTLDLSSQVARALADMG
FEHCSPIQAKSLPYSLSGHDVLGKAQTGTGKTAAFLIAVFEDLLRQPAPEERFAGEPRAL
VIAPTRELVMQIAKDAAAIGKYAGLSVQTLVGGMDFNKQMQALHGQFVDILVATPGRLLD
FCERREVYLDQLEILVIDEADRMLDMGFIPQVKRIVRLAPRKTHRQTLLFSATFSDDVLR
LAESWMFEPVSVEIEPETVATDSVEQFIYMVSGDEKLPLLCNLISMPDVKNVMIFANRRD
QCRTLYERLRKQGYKVGLLSGEIPQGKRVKTLEAFKEGSLQALVATDVAGRGIHIDGVSH
VVNYTLPEEPEDYVHRIGRTGRAGNTGQSISFACEDDAFRLPAIEELLGRKLKCELPPEH
LLNYDN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtttgttgttgcgaatgtgtacaaagcctcccttaattcttaatttttccggtaca
actaacgcaatgtcagatgacactcattctgctgtccctagtgacaaacccgcccccaag
attgcattttctaccctcgatctttcctcgcaagtagcacgtgccctggctgatatgggc
tttgagcactgctctcccatccaggctaaatcgctgccgtacagcttgagtggacatgac
gtgctgggtaaggcgcaaacggggacgggcaaaacagcagcgtttttgattgcggtgttt
gaagatttgttgcgccaaccggcgccggaagaacgcttcgcgggagagccgcgagcgctg
gtgattgcaccgacgcgcgaactggtgatgcagattgccaaagacgcggccgcaattggt
aagtacgccggcttgtctgtgcaaacgctggtcggaggcatggacttcaataaacaaatg
caggcgctgcatggccagttcgtggatattctggtcgccacgccagggcggctgctggat
ttctgcgagcgccgcgaggtgtatttggatcagttggaaattctggtaatcgacgaagcg
gaccgcatgctggatatgggattcattccgcaagtaaaacgtattgtgcgcctggcaccg
cgtaaaacccaccgccagacgctactgttttcagcgaccttctctgacgatgtactgcgc
cttgcggaaagttggatgtttgagccggtgagcgtagagatagaaccggaaacggtcgcg
accgattccgtcgagcagtttatttacatggtttcgggtgacgaaaagctgccgctgctg
tgcaacctcatctccatgccagacgtcaaaaacgtcatgatatttgcgaaccgccgcgac
cagtgccgtaccctgtatgagcgcttgcgcaaacagggctacaaagtcggtctgctgtcg
ggcgagatcccgcagggcaagcgggttaaaacgctagaagcgtttaaagagggaagtttg
caggccctggtggcaaccgatgtggccgggcgcggcattcacattgatggtgtcagccat
gtggtgaactacaccttgcccgaggagccggaagattatgtgcaccgcatcggccgtacc
gggcgcgccggcaatacgggtcagtctattagttttgcctgcgaggacgacgctttccgc
ctgccggcaattgaagaactactggggcgcaaactcaaatgtgaactgccgcccgagcat
ctcctaaattacgataattaa
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