Teredinibacter turnerae: TERTU_3911
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Entry
TERTU_3911 CDS
T00952
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ttu
Teredinibacter turnerae
Pathway
ttu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TERTU_3911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttu03019
]
TERTU_3911
03400 DNA repair and recombination proteins [BR:
ttu03400
]
TERTU_3911
Enzymes [BR:
ttu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TERTU_3911
Messenger RNA biogenesis [BR:
ttu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TERTU_3911
DNA repair and recombination proteins [BR:
ttu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TERTU_3911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
Cas3-like_C_2
RecQ_Zn_bind
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACR12653
UniProt:
C5BTJ4
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All DBs
Position
complement(4318427..4320526)
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AA seq
699 aa
AA seq
DB search
MNRAQAQRLLQTALANPAAEFRDGQWEAIDALVNHRQKLLVVQRTGWGKSSVYFISTKIF
RDRSMGPTIIVSPLLALMRNQIESAQRLGIVAETMNSTNQNDWQAVTQRILNNQIDCLLI
SPERLANDTFIETVMQPIADRIALMVIDEAHCISDWGHDFRPDYRRIVNILRQLPANTPV
LGTTATANNRVVADIQTQLGNIQIHRGPLTRESLGLQTMVLPDQASRLAWLAQVIPTLPG
TGIVYTSTVDSAEQVAQWLSGNGIDAKAYHGSVEADGFENSNSYRQHLEELLLINQLKVL
VATTALGMGYDKPDLSFVIHYQAPGSIVAYYQQVGRAGRGIAHAVGVLMSGVEDQDIHEF
FRDSAFPSEAQVNEILQVLEQSDGLSIRSIEEQTNLRHGQIEKVLKLLSVENPAPVIKDG
SRWVRTPVRYQMDHARISHLTGQRVQEWQEVQAYLDDAGCKMTFLRRALDDLDPTPCGKC
SSCLGQPLLNAAIDPALAHRAVTFLKHAEMVITPKAQVAANAFLEYGFRGNLPQQLRAQE
GRVLSRWGDAGWGRTVADNKHAGRFGDELVEAMAEMIRERWQPDPDPQWVCCVPSLNHPE
LVPEFARRLAARLGLPFMGAVSKVKDNQPQKGQQNRFHQCRNLDGAFAVTQLYQGQPVLL
VDDIVDSGWTLTVIAALLQQAGSGVVFPVALASSSVKDS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtgcccaagcccaacgattactgcaaacagcgctagctaaccccgctgccgaa
ttccgtgatgggcaatgggaagcgattgatgccttggtgaatcatcggcaaaagctatta
gtggtacagcgtaccggttggggtaaaagttcggtttactttatcagcaccaagattttt
cgtgatcgtagtatggggccaaccattattgtttcccccttgctggccttgatgcgcaac
caaattgaatcagcgcagcgtttgggcattgttgcggagaccatgaactctaccaatcaa
aacgactggcaggcggtgacgcagcgcattctgaataatcaaatcgactgtttgctgatt
tcccctgagcgattggctaacgacacctttatcgaaaccgtgatgcagcccattgccgac
cgcatcgccctgatggtgattgatgaagcacactgtatttctgactggggccatgatttt
cgcccggattaccgccgcatcgtgaatattcttcgccagttgcccgccaacacgccggtg
ttgggtactacagcaacggcgaataaccgtgtcgttgcggatattcaaactcagcttgga
aatattcaaattcaccgtggccctttaacccgggaaagcctcggattacaaaccatggtg
ctgccggatcaggcgtcccgcttggcctggttagcccaggtgatccctaccttgccaggc
acgggcattgtttacacttcaactgtggatagtgcagaacaagtggcacagtggttaagc
ggcaatggtattgacgctaaggcttaccacggcagcgttgaagccgatggctttgaaaac
agtaactcctaccgccagcacctagaggagttgctgctcatcaaccagttaaaagtattg
gtagccaccacggcattgggcatgggttacgacaagccggatttaagctttgtaatccac
tatcaagcgccgggttctatcgttgcctattaccagcaggtgggccgtgccgggcgtggc
attgctcatgcggttggtgtgttgatgtcgggtgtggaagatcaggatattcacgaattt
ttccgcgattcggcctttccgtcagaagctcaggtgaatgagattttgcaggtgctggaa
caaagcgacggtttgtcgattcgcagcattgaagagcaaaccaacctgcgccacggtcag
attgagaaagtgctgaagctgctgagcgtggaaaacccggctcctgtgatcaaagacggt
agccgctgggtcagaacccctgttcgctatcaaatggatcatgcccgaatttctcactta
accgggcagcgtgtgcaggaatggcaagaggttcaggcgtatctggatgatgctggctgc
aaaatgacatttttacgccgggcgctggacgatctcgatcctacgccttgcggcaaatgt
tcgtcttgcttggggcagcctcttctcaatgcagcgattgatcccgctttggcccatcgc
gcagtcaccttcctaaagcacgcggaaatggtgatcactccaaaagcacaggtggcggcc
aatgcctttctggaatacggctttcgcggcaatttgccccagcaacttcgcgcccaggaa
ggccgtgttttatcccgctggggtgatgccggctgggggcggacggtagcggataataag
catgccgggcgtttcggtgatgaattggttgaagccatggcagaaatgattcgagagcgc
tggcagcccgacccagatcctcagtgggtgtgttgcgtaccttcgttgaatcatcctgaa
ttggtaccggagtttgcgcgtcgtctggctgcacgattgggcttgccgtttatgggtgca
gttagcaaagtgaaagacaaccagcctcaaaaaggtcagcagaatcgcttccaccaatgc
cgcaatctggatggcgcgtttgctgtaactcagctttatcaggggcaaccagttctgtta
gtagatgacatagtggattccggctggacgctaacggtcatcgcggcactcttacagcaa
gcaggcagcggtgtggttttccccgttgctctggcttcatcttcggtgaaagactcatga
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