Tepidimonas taiwanensis: LCC91_06340
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Entry
LCC91_06340 CDS
T07546
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ttw
Tepidimonas taiwanensis
Pathway
ttw03030
DNA replication
ttw03410
Base excision repair
ttw03420
Nucleotide excision repair
ttw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCC91_06340 (polA)
03410 Base excision repair
LCC91_06340 (polA)
03420 Nucleotide excision repair
LCC91_06340 (polA)
03440 Homologous recombination
LCC91_06340 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttw03032
]
LCC91_06340 (polA)
03400 DNA repair and recombination proteins [BR:
ttw03400
]
LCC91_06340 (polA)
Enzymes [BR:
ttw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCC91_06340 (polA)
DNA replication proteins [BR:
ttw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LCC91_06340 (polA)
DNA repair and recombination proteins [BR:
ttw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LCC91_06340 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCC91_06340 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF7437
Motif
Other DBs
NCBI-ProteinID:
UBQ06682
LinkDB
All DBs
Position
complement(1381769..1384585)
Genome browser
AA seq
938 aa
AA seq
DB search
MSETTSDRAPGAPLLVLVDGSSYLYRAFHAMPDLRANPDDPTSPPTGAIRGILNMLQALQ
KEHPTDHLAVVFDASGPTFRDALYPAYKAHRAPMPDDLRAQIEPIHEVIRLQGWPVLVVP
GVEADDVIGTLARTAARQGWRVIVASGDKDLSQLVDERITIVDTMSGKVRDVAGVEAEFG
VPPRLMVDYQTLVGDAIDNVPGVDKVGPKTAAKWLQTYGSLDAIVAHAHEIKGAVGEHLR
RALDWLPTGRQLLTIRTDCDLAEYVPGWPSLQALQRRAPDTDALRAFYERYGFKSLARAL
ADAGRRPSGAAHAAGGDPMPRGLFDEPEAAPTASTAAALRVEVVRDAAALQRWVDRLRAA
PLVALDTETTSLDEQQARLVGMSFAVTPGEAAYVPLAHTGPGAEEGQLPLDEALALLRPW
LEDAAAPKVGQNTKYDRHVLANHGITVRGYVHDTLLQSYVLEVHRPHGLDSLAERHLGRR
GLSYEDVCGKGAAQIPFAQVPVERAAQYAGEDAEMCLAVHHVLWPRLQAQPALQRIYELE
LAVSDVLWRMERHGVLVDADALRAQSAALGERIAALEAEAHALAGRPFNLGSPKQIGDLL
FGELGLPVVKKTATGAPSTDEEVLEKLAEDYPLPALLLQHRSLSKLKSTYTDKLPTMIHP
VTGRVHTHYAQAVAVTGRLASNEPNLQNIPVRTPEGRRIREAFVAPPGWCIASADYSQIE
LRIMAHLSEDAALLRAFAEGQDVHRATAAEVFGVAPALVTPEQRRYAKTINFGLIYGMSA
YGLAKALGIDATAAKNYIERYFERFAGVRAYMERTREQARERGYVETVFGRRLYLPEIRS
PNGPRRAAAERAAINAPMQGTAADLIKMSMVAVQHALDDAGRQARLILQVHDELVFEVPP
DDIDWVRTEVPRLMAAVATLRVPLVAEVGVGPNWERAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacgacgagcgatcgcgcccccggggccccgctgctggtgctggtggacggc
tccagctacctctaccgtgcttttcacgcgatgcccgatctgcgggccaacccggacgac
ccgaccagcccgccgaccggcgcgatccgcggcatcctcaacatgctgcaggcgctgcag
aaagaacacccgaccgaccacctggcggtggtgttcgacgcctccggccccaccttccgc
gacgcgctgtacccggcgtacaaggcgcaccgcgcgccgatgccggacgacctgcgcgca
cagatcgagccgatccacgaggtgatccgcctgcagggctggccggtgctggtggtgccc
ggcgtcgaggccgacgacgtcatcggcacgctggcgcgcacggccgcacggcagggctgg
cgcgtgatcgtggccagcggcgacaaggacttgagccagctcgtcgacgagcgcatcacc
atcgtcgacacgatgagcggcaaggtgcgcgacgtcgccggggtggaggcggagttcggc
gtgccgccgcgcctgatggtggactatcagacgctggtcggcgacgccatcgacaacgtg
cccggcgtcgacaaggtggggccgaagaccgccgccaagtggctgcagacctacggctcg
ctcgacgccatcgtcgcgcacgcacacgagatcaaaggcgccgtgggcgagcacctgcgc
cgcgcgctcgactggctgcccacggggcggcaattgctgaccatccgcaccgactgcgac
ctggctgaatacgtcccagggtggccgtcgctgcaggcgctgcagcgccgcgcgccggac
accgatgcgctgcgcgcgttttacgagcgctacgggtttaagtccctggcgcgtgcgctg
gccgacgccggccgccgcccatccggtgctgcccacgcggccgggggcgatccgatgccg
cgggggctgttcgacgagcccgaggctgcgccgacggcgtccaccgcggcggcactgcgc
gtcgaggtcgtgcgcgacgccgctgcgctgcagcgctgggtcgatcgcctgcgcgcggcg
ccgctcgtcgcgctggacaccgaaaccacgtcgctcgacgagcaacaggcgcggctggtg
gggatgtcgtttgccgtcacgccgggcgaggcggcgtacgtgccgctggcgcacaccggc
ccgggcgcggaggagggccagctgccgctggacgaggcgctcgcgctgctgcggccgtgg
ctggaggacgccgccgcgcccaaagtcggacaaaacaccaagtacgaccgccacgtgctc
gccaaccacggcatcaccgtgcgcgggtatgtgcacgacacgctgctgcagagctacgtg
ctggaggtgcaccgcccgcacggcctcgacagcctggccgagcgccacctcgggcggcgc
gggctgagctacgaggacgtctgcggcaaaggcgcggcgcagatcccgtttgcgcaggtg
cccgtcgagcgcgcggcccagtacgccggcgaggacgccgagatgtgcctggccgtgcac
cacgtgctgtggccgcggctgcaggcgcagccggcgctgcagcgcatctacgaactggag
ctcgcggtcagcgacgtgctgtggcgcatggagcggcacggcgtgctcgtcgacgccgat
gcgctgcgcgcacagagcgccgcgctcggcgagcgcatcgcggcgctggaggccgaggcg
cacgcgctcgccggccgaccgttcaacctcggctcgcccaagcagatcggcgatctgctg
tttggcgagctgggtctgcccgtggtgaaaaaaaccgccaccggtgcccccagcaccgac
gaggaggtgctggaaaaattggccgaggactacccgctgcccgcgctgctgctgcagcac
cgcagcttgtccaagctcaagagcacctacaccgacaagctgcccaccatgatccacccg
gtcaccgggcgcgtgcacacccactacgcgcaggcggtggcggtgaccgggcggctcgcc
agcaacgagcccaatctgcaaaacatccccgtgcgcacgcccgaggggcggcgcatccgc
gaggcattcgtcgcgccgcctggctggtgcatcgccagcgccgactactcgcagatcgag
ctgcgcatcatggcgcacctgagcgaagacgccgcgctgctgcgcgcctttgccgagggg
caggacgtgcaccgcgccaccgcggccgaggtgttcggcgtggccccggcgctcgtcacg
cccgagcagcgccgctacgccaagacgatcaacttcggcctgatttatggcatgagcgcc
tacgggctggccaaggcgctgggcatcgacgccaccgccgccaagaactacatcgagcgc
tacttcgagcgcttcgccggcgtgcgcgcgtacatggagcgcacgcgcgagcaggcgcgc
gagcgcggctacgtggaaaccgtcttcgggcggcggctgtacctgccggaaatccgctcg
cccaacgggccgcggcgcgccgcggccgaacgcgccgcgatcaacgccccgatgcagggc
acggccgccgacctcatcaagatgagcatggtggcggtgcagcacgcgctggacgacgcg
gggcggcaggcgcggctgatcctgcaggtgcacgacgaactggtgttcgaggtgccgccg
gacgacatcgactgggtgcgcaccgaggtgccgcgtctgatggccgccgtggccacgctg
cgcgtgccgctggtggccgaggtgggcgtgggcccgaactgggagcgcgcgcactga
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