Tepidimonas taiwanensis: LCC91_06400
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Entry
LCC91_06400 CDS
T07546
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ttw
Tepidimonas taiwanensis
Pathway
ttw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ttw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LCC91_06400 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttw03019
]
LCC91_06400 (orn)
03009 Ribosome biogenesis [BR:
ttw03009
]
LCC91_06400 (orn)
Messenger RNA biogenesis [BR:
ttw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LCC91_06400 (orn)
Ribosome biogenesis [BR:
ttw03009
]
Eukaryotic type
Pre-60S particles
RNases
LCC91_06400 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
UBQ06693
LinkDB
All DBs
Position
complement(1399159..1399761)
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AA seq
200 aa
AA seq
DB search
MTNAASLPEPLSTEALTLPKSDQNLVWIDCEMSGLDPERERLLEVAVVITGPHLTPRIEG
PVLVIHQSDAVLDAMDNWNKGTHGRSGLIDKVKASTLTEADAEEQLLAFIARYVPKGASP
MCGNSVGQDRRFLVKYMPKLEAYFHYRNLDVSTLKELAKRWRPQVYDAFKKQQRHTALAD
VHESIDELVHYREHFLRLSA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgccgcatccctgcccgaacccctgtccacagaggcgctgacgctgcccaag
agtgaccagaacctggtctggatcgactgcgagatgtcggggctggaccccgagcgcgag
cgcctgctggaggtggcggtggtcattaccggcccgcacctgaccccccgcatcgaaggg
ccggtgctcgtcatccaccagagcgacgccgtgctcgacgcgatggacaactggaacaag
ggcacgcacgggcgcagcggcctcatcgacaaggtcaaggccagcacgctcaccgaagcc
gacgccgaggagcagttgctcgcgttcatcgcgcgctacgtgccgaagggggcgtcgccg
atgtgcggcaacagcgtcgggcaggaccggcgcttcctcgtcaaatatatgcccaagctg
gaggcgtacttccactaccgcaacctcgacgtcagcaccctcaaggagctggccaagcgc
tggcggccgcaggtgtacgacgccttcaagaagcagcagcggcacacggcgctggccgac
gtgcacgagtcgatcgacgagctcgtgcattatcgggagcacttcctgcgcctgtcggcc
tga
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