Tepidimonas taiwanensis: LCC91_10770
Help
Entry
LCC91_10770 CDS
T07546
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ttw
Tepidimonas taiwanensis
Brite
KEGG Orthology (KO) [BR:
ttw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ttw03016
]
LCC91_10770
Enzymes [BR:
ttw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LCC91_10770
Transfer RNA biogenesis [BR:
ttw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LCC91_10770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
TetR_C_32
Motif
Other DBs
NCBI-ProteinID:
UBQ05030
LinkDB
All DBs
Position
2269924..2271993
Genome browser
AA seq
689 aa
AA seq
DB search
MFALFEDAGKLHAGRVLSSAEASHQIELASGKRLKVKAAHVLLTFDQPAPDALLAQAGAL
AAEIDLDLAWEFAPEADFGFEELAREYFGAGASVAQQAAMLLRLHEAPHYFRRAGKGRFR
KASADVLRQALAAIERKKAVQAQIDAWAAALAAGECPAPIREQLYRILFKPDKNAPEYKA
VVHAARETHLAPLALLQRAGAITSAYQFHWQRFLHEHFPRGTGFPTLEAPPAPQDLPLAD
GVAAFSIDDSSTTEIDDALSLRGLGSGTVTLGIHIAAPGLAIAPDSPLDRVARERLSTVY
MPGHKITMLPDAVVQTYTLQAGGARPALSLYLTIDEATLEVREAVTRVERVPITHNLRHD
QLDAAITPAWLEDPAAPAAAPLPEEVAALRPTLAFLWRLAQACKARREAVRGRPETFTRP
DYTFKLEGVSGDEPTGEETVVIGTRSRGAPLDLIVAEAMILANSTWGRWLADLGVPGIYR
SQASLAPGVKVRMGTKPLPHAGIGVPCYAWSTSPLRRYTDLVNQWQLIACARHGATAALA
APFKPKDAALMAVISAFDAAYTAYGQFQSSMERYWTLRYLRQQGIGELEAAYLKDNLVRA
ETLPLVFPALGTDGLQRGERVRVRLGAIDELTLEVNGTVVERLGSVEPVTEAEDTLEGEV
EEPLAAPLAIAVAVDEADDATDASPPAAG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgccctgttcgaagacgccggcaagctgcatgccggccgcgtgttgtcctctgcc
gaagcctcgcaccagatcgagctggcgtcgggcaagcggcttaaggtcaaagcggcccac
gtgctgctgacgttcgaccagcccgcgcccgatgcgctgctggcgcaggccggcgcgctc
gccgcggagatcgacctcgacctcgcgtgggagtttgcgcccgaagccgacttcggcttc
gaggagctggcgcgtgagtatttcggcgccggcgcctccgttgcgcaacaggcggcgatg
ctgctgcgcctgcacgaggcgccacactatttccgccgcgccggcaaggggcgctttcgc
aaagcgagcgccgacgtgctgcggcaggcgctggccgcgatcgagcgcaaaaaggccgtg
caggcacaaatcgacgcctgggccgcggcgctggccgccggcgagtgccccgcgccgatc
cgcgagcagctctaccgcatcctcttcaagccggacaagaacgcgccggaatacaaggcc
gtcgtgcacgcggcgcgcgagacgcacctcgccccgctggcgctgctgcagcgcgcgggg
gccatcaccagcgcctaccagttccactggcagcgctttttgcacgagcattttccacgt
ggcacgggcttccccaccctggaggcaccgcccgcgccgcaggacttgccgctggccgac
ggggtggccgcattctcgatcgacgactccagcaccaccgagatcgacgacgcgctgagc
ctgcgcggcttgggcagcggcacggtgacgctgggcatccacatcgcggcgccgggcctg
gcgatcgcgcccgacagcccgctcgatcgcgtggcgcgcgagcgcctctccaccgtctac
atgcccgggcacaagatcacgatgctgcccgacgcggtggtgcagacctacacgctgcaa
gccggtggcgcccgcccggccctttcgttgtacctgacgatcgacgaggcgacgctggag
gtgcgcgaggccgtcacgcgcgtcgagcgcgtgccgatcacccacaacctgcgccacgac
cagctcgacgccgccatcacgcccgcgtggctggaagacccggcggcgccggcggccgcc
ccgctgccggaggaagtcgcggcgctgcggccgacgctcgcgttcctgtggcggctggcg
caggcgtgcaaggcgcggcgcgaggccgtacgtggccggcccgaaaccttcacgcgcccc
gactacaccttcaagctcgagggtgtcagcggcgacgagcccacgggcgaggaaaccgtc
gtcatcggcacgcgctcgcgcggcgcgccgctcgatttgatcgtcgccgaggcgatgatc
ctggccaacagcacctggggccgctggctcgccgacctgggcgtgcctggcatctaccgc
agtcaggcgagcctcgctcccggcgtcaaggtgcgcatgggcaccaagccgctgccgcac
gcgggcatcggcgtgccctgctacgcgtggagcacctcgccgctgcggcgctacacggac
ctcgtcaaccagtggcagctcatcgcctgtgcccggcatggcgccacggccgcactggcc
gcccccttcaagcccaaggacgccgcgctgatggccgtcatcagcgcgttcgacgcggcg
tacacggcctatgggcagttccagagcagcatggagcgctactggacgctgcgctacctg
cgccagcagggcatcggcgaactggaagccgcgtacctgaaggacaacctcgtgcgcgcc
gagacgttgccgctcgtgttcccggcgctcggcaccgatgggctgcagcgcggcgagcgc
gtgcgcgtgcggctgggcgcgatcgacgagctgacgctggaggtcaacggcaccgtggtc
gaacggctgggcagcgtcgagccggtgaccgaggccgaagacacgctggagggcgaagtc
gaggagccgctggccgcgccgctggcgatcgccgtcgccgtggacgaagccgacgacgcc
acggacgcgagcccccccgccgctggctga
DBGET
integrated database retrieval system
