Tepidimonas taiwanensis: LCC91_12550
Help
Entry
LCC91_12550 CDS
T07546
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ttw
Tepidimonas taiwanensis
Pathway
ttw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCC91_12550 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttw03019
]
LCC91_12550 (recQ)
03400 DNA repair and recombination proteins [BR:
ttw03400
]
LCC91_12550 (recQ)
Enzymes [BR:
ttw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCC91_12550 (recQ)
Messenger RNA biogenesis [BR:
ttw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LCC91_12550 (recQ)
DNA repair and recombination proteins [BR:
ttw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LCC91_12550 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Tuberculin
ResIII
Motif
Other DBs
NCBI-ProteinID:
UBQ05347
LinkDB
All DBs
Position
2657787..2659706
Genome browser
AA seq
639 aa
AA seq
DB search
MKPLTPQQALADARAVLAEVFGYPAFRGQQADIVTHVGAGGDALVLMPTGGGKSLCYQIP
AIVRQRAGLGTTIVVSPLIALMHDQVGALHEAGVEAAYLNSSLTAEQAAAVEQRLMRGEL
TLLYAAPERIVTPRFLARLQALFEAGRLALFAIDEAHCVSQWGHDFRPEYRELAVLPERF
PGVPRVALTATADALTRADIVAHLRLEGAATFVASFDRPNIRYTIVEKRDSLRQLLRFIE
QEHGGPGGHDSGIVYCASRRKVEDVAARLQAAGLRALPYHAGLDAATRQRHQDRFLREDG
LIIVATIAFGMGIDKPDVRFVAHLDLPKNIEGYYQETGRAGRDGEPANAWMAYGLQDVVQ
QRRLIDESAASDEFKRVLRGKLDALLALAESTGCRRQQLLAYFGEASAPCGNCDNCLAPP
QTWDATEPARKLLSCIYRLQQSGTAFGAGHVIDVLRGQETEKIRQYGHAALSTYGIGREL
DETQWRRLLRQLIALGAVQVAGEFHTLHLTAAARPILRGEQAVRLRVAADGGGRARDRSE
RRARAVSSEARLPLIGREVLAALKAWRAGVAREHDLPAYVIFHDATLRAIAECLPREWSD
LLDIPGLGDKKREAYGADVLHIVAEALARTAPSPLTKWA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccactgacgccgcagcaggccctggccgacgcgcgggccgtgctggctgaggta
ttcggctacccggccttccgcggccagcaggcggacatcgtcacgcacgtgggcgcgggt
ggcgacgcgctggtgctgatgcccaccgggggcggcaagtcgctgtgctaccagatcccg
gccatcgtgcgccagcgcgccggcctggggaccaccatcgtcgtctcaccgctgatcgcg
ctgatgcacgaccaggtgggggcgctgcacgaggcgggggtggaggcggcgtacctgaat
tcgagcctgacggcggagcaggccgcggccgtcgagcagcgcctgatgcgcggcgagctc
accctgttgtacgccgcgccggagcgcatcgtcacgccgcgctttttggcccggctgcag
gcgctgttcgaggccgggcggctggcgctgttcgccatcgacgaggcgcactgcgtcagc
cagtgggggcacgatttccggcccgagtaccgcgagctggcggtgctgcccgagcgcttt
cccggcgtgccgcgcgtggcgctgaccgccacggccgacgcgctcacgcgcgccgacatc
gtggcgcacctgcggctggagggcgcggccacgttcgtcgccagcttcgaccggcccaac
atccgctacaccatcgtcgaaaagcgcgacagcctgcggcagttgctgcgcttcatcgaa
caggagcacggcggccccggcgggcacgacagcggcatcgtctactgcgcgtcgcggcgc
aaggtggaggacgtcgccgcgcggctgcaggcggcgggcttgcgcgcgctgccctaccac
gcggggctcgacgccgccacgcgccagcggcaccaggaccgctttctgcgcgaggacggc
ctcatcatcgtcgccaccatcgccttcggcatgggcatcgacaagccggacgtgcgcttc
gtcgcccacctggacctgccgaaaaatatcgagggctactaccaggaaaccggccgcgcg
gggcgtgatggcgagccggcgaacgcgtggatggcctacgggctgcaggacgtggtgcag
cagcgccggctgatcgacgagagcgccgccagcgacgagttcaagcgcgtgctgcgcggc
aagctcgacgcgctgctggcgctggcggagtccaccggctgccgccgccagcaattgttg
gcctactttggcgaggcgagcgccccgtgcggcaactgcgacaactgcctggcaccgccg
cagacctgggacgcgaccgagccggcgcgcaagctgctgtcgtgtatctatcggctgcag
cagagcggaacggcgttcggtgccggccacgtgatcgacgtgctgcgcgggcaggagacg
gagaagatccgccagtacggccatgcggcgctgtccacctatggcatagggcgcgagctg
gacgagacgcagtggcgccggctgttgcgccagctcatcgcgctcggcgcggtgcaggtg
gcgggggagttccacacgctgcacctgaccgcggcggcgcgtccgatcctgcgcggcgag
caggcggtgcgcctgcgcgtcgccgccgacggcggtgggcgtgcgcgcgaccgcagcgag
cgccgggcccgcgcggtgagcagcgaggcgcggctgccgctgatcgggcgcgaggtgctc
gcggccctcaaggcatggcgcgcgggcgtggcgcgcgagcacgacctgccggcctacgtg
atctttcacgacgcgacgctgcgtgcgatcgccgagtgcctgccgcgcgagtggtcggac
ctgctcgacatccccggcctgggtgacaagaagcgcgaggcctacggcgcggacgtgttg
cacatcgtcgccgaggcgttggctcgcacagcgcccagcccgctcaccaagtgggcgtga
DBGET
integrated database retrieval system
