Thunnus thynnus (Atlantic bluefin tuna): 137168543
Help
Entry
137168543 CDS
T11154
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04120
Ubiquitin mediated proteolysis
tty04137
Mitophagy - animal
tty04144
Endocytosis
tty04340
Hedgehog signaling pathway
tty04350
TGF-beta signaling pathway
tty04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137168543 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
137168543 (smurf1)
04350 TGF-beta signaling pathway
137168543 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137168543 (smurf1)
04137 Mitophagy - animal
137168543 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
137168543 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137168543 (smurf1)
04121 Ubiquitin system [BR:
tty04121
]
137168543 (smurf1)
03029 Mitochondrial biogenesis [BR:
tty03029
]
137168543 (smurf1)
Enzymes [BR:
tty01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
137168543 (smurf1)
Membrane trafficking [BR:
tty04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
137168543 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
137168543 (smurf1)
Ubiquitin system [BR:
tty04121
]
Ubiquitin ligases (E3)
HECT type E3
137168543 (smurf1)
Mitochondrial biogenesis [BR:
tty03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
137168543 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137168543
NCBI-ProteinID:
XP_067427285
LinkDB
All DBs
Position
17:21548792..21565610
Genome browser
AA seq
730 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPSQEGRLQTQRIRGQDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQAKDSSQAPQMDVGGEEGGGGGVGGGGGDGDVAARYERDLVHKLKLLRH
ELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREW
LYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHYIN
GSFTLPFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFLQ
HELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDHKE
LELIIGGLGKIDLADWKTNTRLKHCTSESNVVRWFWQAVEAFSEERRGRLLQFVTGSTRV
PLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTA
VEETCGFAVE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccgggactcggaggaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgcctgccagatccatttgccaaggtg
gtggtggatggatcaggtcaatgccactctacagacacagtcaagagcacactggacccc
aaatggaatcagcactacgacctctacattggaaagacagactcaatcaccatcagtata
tggaaccacaagaagatccataaacgacagggagcaggcttcttgggctgcatacgactt
ctttctaatgccatcagcaggctaaaagacacaggataccagcgactagatctatgtaaa
ctgaacccttcggacagcgacgcagtgcggggtcagattgtagtaagcttacaaacgcga
gaccgcatcggcagcggaggccccgtggtggactgcagaggactgttggaaaatgatggg
cctgtgtttgagggatgtttcagcgaagagccacttccctattcagaccccactggtgca
gcagggggagggaactgtcggcttgactcacccagtcaagaaggccgtcttcagacgcag
cgaatcagagggcaggattccagaggacacggccacacccctcagaacagacctcacggg
caccaaccgcctgacctgccggagggatacgagcagcgaacaacagtgcagggccaggtg
tacttccttcacacacagacaggcgtcagcacctggcacgaccctcggataccgcgggac
ctggccagtgtgagctgtgaggaactcggtccgttgccagtgggctgggaggtccgaagc
accgtgtctggccggatctactttgtggaccacaacaaccgaaccacacagttcacagac
ccgcgcctgcataccattatcagccagcaatcccaagcgaaggactcctcccaagccccc
cagatggacgtggggggtgaagaggggggaggcggaggagtgggcggcggaggaggagac
ggagatgtggcggcgcgctacgagagagacctggtccataagctgaagctgctccgccac
gagctgtccctgcagcaaccgcaagcgggacactgtcgcatagaggtgtcccgcgaggag
atctttgaggagtcgtaccggcagataatgaagatgaggcccaaagacctgaagaagcgt
ctgatggtgaagttcaggggagaggagggtctggattatggtggtgtggccagggagtgg
ctgtacctgctgtgtcatgaaatgttgaacccctattacggcctgttccagtactccaca
gacaatatttacacactacagatcaaccccgactcctccatcaaccctgaccatttgtca
tacttccattttgtgggtcgcgtgatgggcctggcagtttttcacggtcactacatcaac
gggagtttcacgctgcccttctacaaacagctgctaggcaaacccatccaactcaacgac
ctggagaccaccgacccagagttgcacaagagcctcgtctggatattagagaacgacatc
acttcagtcctagaccacacattttgcgtggagcacaatgcctttggaaagtttctacaa
catgagctcaaacctaatgggcgtaatatccctgttactgaggagaacaagaaagaatac
gtaagactttatgtgaactggaggttcatgcggggaattgaagcccagtttctggctcta
cagaagggattcagtgagctcatcccccagcacctcctcaaaccttttgaccataaagaa
cttgagttgatcatcggcggattaggaaagatagacctcgcagactggaagacgaacacc
cgcctgaagcactgtacaagcgaaagcaacgtggtgcggtggttctggcaggcggtggag
gccttcagcgaggagaggagaggacgcctgctgcagttcgtcacgggctccaccagggtc
cctctacagggattcaaagcgctgcagggttctacaggttctgcaggaccaaggctcttc
accatccatttgatagacgccaacacagacaacctgcccaaggctcacacgtgttttaac
aggatagacatccctccctacgagtcttacgagaaactttacgagaaactgctgacggct
gtggaggagacctgcggctttgctgtggagtga
DBGET
integrated database retrieval system
