Thunnus thynnus (Atlantic bluefin tuna): 137168648
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Entry
137168648 CDS
T11154
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137168648 (rfx1a)
Transcription factors [BR:
tty03000
]
Eukaryotic type
Other basic domains
RF-X
137168648 (rfx1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
137168648
NCBI-ProteinID:
XP_067427469
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All DBs
Position
17:complement(16852724..16866090)
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AA seq
1002 aa
AA seq
DB search
MATSGYVGEIQPAAQPQGVGVAVTSGQPDASSSPATAPQFLAEIQTTVATPTVVTPTVQT
TPTEQTASITTQKPAAGSQAQSTAQAQPAQTQYVTAEIQGSPTQSGNAQSTPQYIVVTVT
EGSLHSSDSVSDSSPPPAVVQTGVPTQVVQQVQTAQQQRSVVQATSQIAKTEPGTQLSVT
SLQPVHISPELLPSTEVTALVRDKNLEEWQPHHEMGQPECLAWASADYKGDCCSKPLLLP
LDLLQYYQSLYLLSMHAEKEIGAHPAVTSSGSDQSPLLATTTSFQVQQQLTPVPVQHVYT
NQVQYVEGADTNYTTSTIRSSAFPYTDTPLYTQTTAAQYYEGQPTSGSQASTPGTPLTVS
VTAGTTGGVSMFVAQPTSAAGGGATVVSTGVTTNGAGDGAGTNGGATGSYVIQGGYMLGS
SSGGAAGNSQNYSHTARASPATVSITEGEESSVPSADKKVQWLLDNYETAEGVSLPRSTL
YCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAGSSLLR
LMEDQQHLAMRQQPFSQKQRLKPVHKVEGMTNGTASGLGQQQQQQQGSGHVDISTQVQQY
QQFLDASRALPEFPDIDLQGKSLPEGIELEHIKSFQLLYREHCEAILDVMVNLQFTLVET
LWKTFWRFSQSQAGDATLAVHDESEKRLPKSCLVLLCKYEPVLRWSRDCDNSLYQGLVEI
LIPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIPEEMVRIKVTSANAFAQTLRRYTSL
NHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKLTLQQ
QNSLEQWAAWLDGVVSQVLKPYQQSPTFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGS
FHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASLGRGLNQLDPDKEEEEEEEEESD
EEGQELSLPSDGVVLGDESLEPPAKLARTDQRVLFTTGSTDN
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcaggctacgtaggtgagatccagccggcagcccaaccccagggggttggt
gttgctgtcacatctgggcaacccgacgccagctccagccctgcaactgcccctcagttt
ctggctgagattcagactactgtagccacccccacagttgtcacacccacagtccaaact
actcccactgaacaaactgcttccatcaccactcagaagcctgcagctggtagtcaagcc
cagtccacagcacaggcccagccagctcagacacaatatgtgactgcagagatccagggc
tcccccacacagtctggaaatgctcaaagcactcctcagtacatcgttgttactgtcaca
gagggctcccttcactcaagtgacagtgtgtcagactctagtccccctccagctgtggtg
cagactggagtgcccacgcaggttgttcagcaggtacagacagctcagcagcagaggtct
gtggtgcaggccacctctcaaatagccaagactgagccaggcacccagctcagtgtcacc
agtctgcagcctgttcatattagccctgagctccttcctagcactgaagtgacagcgtta
gtcagagataagaatctagaagaatggcagccgcatcatgagatgggacagccagagtgc
ctggcctgggcatcagcagactacaaaggagactgctgcagcaaacctctcttgctcccc
ttggacctccttcagtattaccaatcattgtacctgctctctatgcacgctgagaaagag
ataggagcccaccccgcagtcaccagctcaggctccgatcagtcaccactgcttgctaca
actacgtctttccaagtccagcagcagctcacaccagtgccagtgcaacatgtgtacacc
aatcaagtgcagtatgtggaaggagcagacactaactacaccaccagcaccattcgttcc
agcgccttcccttacactgacacacccctgtacacgcagaccaccgctgcccagtattat
gaaggtcagccaacctcaggctcacaggcgtccacccctggcacacctctaaccgtctct
gtgactgctggcacaacaggcggcgtgtccatgtttgtggcccagcccaccagcgcagca
gggggaggggccacagtggtgtccacaggtgtaaccaccaatggggcaggggatggggca
ggcaccaatggtggtgccacaggaagttatgtgatccaggggggttacatgctgggcagc
agcagcggaggggcagctggcaacagtcagaactactcacacaccgcccgcgcctcccca
gccactgtgagtattacagagggcgaggagagtagcgtgccgtcggcagacaagaaggta
cagtggttgctggacaactatgagacagctgaaggagtgagtctgccgcgttccacactc
tactgccactatctgctgcactgccaggagcagaaactagagcctgttaatgctgcctct
ttcgggaaactcattagatcagtgttcatggggctgcgtacacgacgcctgggcacacgc
ggtaattctaaataccactactacgggctgaggatcaaggcaggctcttctcttctccgt
ctgatggaagaccagcaacatctggccatgaggcagcagcccttctcacagaaacagagg
ttgaagcctgtgcataaagttgagggaatgaccaatgggacagcatcaggactaggccag
cagcagcaacagcagcagggttcagggcatgttgacatcagcacccaggttcagcagtac
cagcagttcctagatgcatccagagcactcccagagttcccagacatcgacctccagggg
aaatctctgccagagggcattgagcttgagcacataaagagctttcagctgctgtacaga
gaacactgtgaggccatactggatgtgatggtcaacctgcagttcaccctggtggagacc
ctgtggaagaccttctggaggttcagccagagtcaggctggagatgccaccttggctgtt
catgatgagtcagagaagcgtctccctaaatcctgcctggtgttgctgtgcaagtatgag
ccagtgctgcgctggagccgtgactgtgacaacagcctgtaccagggcctggtggaaatc
ctcattcctgatgtcctcaggcccatccccagtgccttaactcaagccatccggaacttt
gccaaaagcctggagagctggctgactaatgccatgatgaacatccctgaagaaatggtc
cgcatcaaggtaacgtctgccaatgcatttgcccagacactgcgtcgctacactagtctg
aaccaccttgcccaggcagcacgtgccgtcctccagaacacagcccagatcaaccagatg
ctctctgacctcaaccgtgtcgactttgctaacgtccaggagcaggcttcatgggtgtgc
cgatgtgaagaccgtgttgtccagcggctagagcaggactttaagctgaccctgcagcag
cagaactccctggagcagtgggctgcatggctggatggtgtggtctcccaggtcctaaag
ccctaccaacaaagccctaccttccctaaggctgccaagctcttcctgctcaagtggtcc
ttttacagttccatggtgattagggacctgaccctgcggagtgcagccagttttggttcc
tttcacctgatccgcctgctgtatgatgagtacatgtactacctgatagagcacagagta
gcccaggctaaaggagagacccccattgctgttatgggagagtttgccagtttaggccgg
ggtctaaaccagctggatcctgacaaagaagaagaagaggaagaggaggaggagagtgat
gaggaaggtcaagagctgtccctcccctcagacggcgtggtgctaggagacgagtctctg
gagcctcctgccaagctggccaggactgaccagagagtccttttcaccactggctcaact
gacaactaa
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