Thunnus thynnus (Atlantic bluefin tuna): 137168926
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Entry
137168926 CDS
T11154
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137168926 (prdm1c)
Transcription factors [BR:
tty03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
137168926 (prdm1c)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
137168926
NCBI-ProteinID:
XP_067427890
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All DBs
Position
18:complement(19595818..19605256)
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AA seq
788 aa
AA seq
DB search
MCGSSQGFTASSSQRSTAMLTSEGSPQSTGVITPAMPDTQDVDMTSWRETDFEEKCTYIV
NDQPLEEESENHSRIRAERSLPRNLALKRHLNSAEVLGVTSKELIPKGTRFGPLVGESYT
NETLLKDANRKYFWRVFSEGHLHHILDGLNEERSNWMRYVNPACGVEEQNLVACQSGLDI
YFYTIKPLQPGQELLVWYCPEFAQRCNYPPLGRLTIETIEQSQALEKTTGKRGHSVSEIL
RDEPSKTLTTCSRRLDSPLSQNNLSVFPLCPRVVYPIKPHTEGIHSHRYAPLPSLPSCGP
SATKRPALSSPVPTSSRFSFQHSQTPVIAKPYQEPSVPDCVYPALRHNPYLLPHYSLGLN
SILPHPYPFYSDRLKSHLTFSSHFLPFDGYAHLLNPRANGHKDFSLALSDTKQDLILSPI
SEHKDNKNLISKRTNYLRIPSDNLRDFKHSPPINIHPDLPIPSTSSASSMVTSLCGALPS
LAPGGCSPPLGTAVSSDCLPSKPTPATHSNTVDAMDLRKTKHGGQVIGYKTLSYPLTRQN
GKIRYECNVCGKVFGQLSNLKVHLRVHSGERPFRCQTCNKNFTQLAHLQKHYLVHTGEKP
HECKVCHKRFSSTSNLKTHQRLHSGERPYQCKLCPARFTQFVHLKLHKRLHTGERPHRCP
RCPCAYLHYCSLQVHLQGFCPLSPSVSHRHSPEDLHRVNSEIESFDMSEAAEQLEAMAVE
AKMDKGNVIDLIKKMETHTSGYQDDARGDTELSIYKSAKEYSAVQLHHSPLPLHPTSIKL
ESGCMSEP
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggcttcacagcctcctcctctcagcgcagcacagccatgtta
acctcagaagggtcaccgcaaagcacaggggtcatcacaccagcaatgccagacacacag
gatgtagacatgacatcatggagggagacagactttgaggagaagtgcacttacatcgtg
aatgaccaacctctggaagaagagtccgaaaaccacagcaggatacgggccgagagatcc
ttacccagaaacctggccctgaaacgccacctgaactcagcagaggtgctcggggtgacc
agtaaggagttgattcctaaagggacacgtttcgggcctctggtgggagaaagctacacc
aacgaaacactgttgaaagatgccaacaggaagtacttttggagggtcttctctgagggg
cacttacaccacatcctggatggtttgaatgaggaacggagcaattggatgcgttatgtc
aacccagcctgtggtgtggaggagcagaacttggttgcatgccagagtggtttggacatc
tacttctacaccatcaaaccacttcagcctggccaggagcttctggtgtggtactgccct
gaatttgcgcagcgctgtaactaccctccactgggccgactgactattgaaactattgag
cagagtcaagctttggagaagacaacagggaaacgaggacacagcgtctctgaaatcctt
cgggacgagccctccaaaaccctgactacttgctccagacgtctggacagtcccttatct
cagaacaacctctcagtttttcccctgtgtccccgtgttgtctaccctatcaagccccac
acagaaggaatccacagccatagatacgcacctctaccatctctgccatcctgtggccct
tcagccacgaaaaggccagctttaagtagtcctgtccccaccagttcacgcttcagcttt
cagcatagtcaaacccctgttatagccaaaccttaccaagagccctctgtgcctgattgt
gtttatcctgctctgaggcacaatccctatctcctgcctcactactcacttggcctaaac
agcattctacctcacccatacccgttctatagtgatcgactgaaatctcacttaacattc
tcatcccattttctgccttttgatggctatgcacacctcctcaaccctcgggccaatgga
cacaaagacttttcacttgcactatcagataccaaacaagacctcattctttcaccaatc
agtgagcacaaagacaacaagaacctcatatctaaaaggacaaactacctcaggatcccc
tcagacaacctcagagatttcaaacactctcctcccatcaacatccacccagacctccct
ataccttcaacatcaagtgcctcatctatggtcacctcactctgcggagcactgccctct
cttgcacctggaggatgctcaccaccgctgggcacagctgtctcctcagactgtctcccc
tcaaagcccacccctgccacgcatagcaatactgtggatgcaatggacctcagaaagact
aaacatggagggcaggtcattggctacaagaccttgtcttaccccctcaccaggcagaac
ggaaagatccggtatgagtgcaacgtctgtggaaaggtctttgggcagctgtccaacctc
aaggttcatctgcgagtgcacagtggagagcgtcccttcaggtgtcaaacctgcaacaag
aacttcacacagctggctcacctgcagaaacactacctggttcacacaggagagaagcct
catgaatgcaaggtatgccataagcgattcagcagcaccagtaacttgaagacccaccag
cggctacactcaggtgagaggccttaccagtgcaagctctgcccagcccggtttactcag
ttcgtccacctgaagctccacaaacgcctccacaccggggagcgacctcaccggtgccct
cgctgcccctgtgcctatctccattactgcagcctccaggtgcacctccaaggcttctgc
cccctctccccctcagtctcccacagacactcgccagaggacctacaccgagtcaactcc
gagatcgagagctttgacatgagcgaggcggcagagcaacttgaggccatggctgtggag
gccaagatggacaaggggaatgttattgacctgataaagaagatggagactcatacctct
ggctaccaggatgatgccagaggggacactgagttaagcatctacaaatcagcaaaggag
tattctgctgttcagctgcatcatagtcctctacctctgcatccgaccagcatcaagctg
gagtcaggttgcatgtcagagccctaa
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