KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137169623
Entry
137169623         CDS       T11154                                 
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03082  ATP-dependent chromatin remodeling
tty03083  Polycomb repressive complex
tty04110  Cell cycle
tty04330  Notch signaling pathway
tty04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tty00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    137169623
   03083 Polycomb repressive complex
    137169623
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    137169623
   04350 TGF-beta signaling pathway
    137169623
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    137169623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tty03036]
    137169623
Enzymes [BR:tty01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     137169623
Chromosome and associated proteins [BR:tty03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     137169623
   HDAC complexes
    Sin3A-HDAC complex
     137169623
    BRAF-HDAC complex
     137169623
    REST complex
     137169623
    SHIP complex
     137169623
    MiDAC complex
     137169623
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     137169623
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    137169623
  Chromatin remodeling factors
   NuRD complex
    137169623
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 137169623
NCBI-ProteinID: XP_067428998
LinkDB
Position
18:complement(27010511..27024667)
AA seq 489 aa
MAYTTAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMSKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHSKCVEYIKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTQEY
MDKIKQRLFENLRMLPHAPGVQMQAIPEDAVPGDTVDEDTEDPDKRLSIRATDKRIACDE
EFSDSEDEGEGGRRNVANHKKGAKRQRVEEDKKEGEEKKAEMKEEEKTKDSSAEKTDSKS
VKTEQTSSA
NT seq 1470 nt   +upstreamnt  +downstreamnt
atggcttacacgactgctggagggactaagaagaaggtctgctactactacgacggtgac
ataggaaattattactatggacaaggacatcccatgaagccacatcgcatccggatgact
cacaacctgcttctgaactatggactgtacaggaaaatggagatctatagaccacacaaa
gccacggccgaggagatgacaaaatatcacagcgacgactacatcaagttcctccgatcc
atacggccagacaacatgtccgagttcagcaagcagatgcagcgcttcaacgttggagag
gactgtcctgtgtttgatggcttgtttgagttctgccaactctctgccggtggctctgct
gctggttcagtgaaactgaaccgacagcagactgacattgcagtgaactgggcaggagga
ctccaccacgcgaagaagtctgaagcctctggcttctgctatgttaatgacatcgtgctg
gccatcttggagctgctcaagtaccaccagagggtgctgtacattgatattgacatccac
catggggacggagtggaggaggctttctacaccacagacagggtcatgactgtctccttc
cataaatacggggagtatttccctggaactggagacctcagggatattggagctggaaaa
ggcaaatattacgcagtcaacttccctctgcgggacggcatcgacgatgagtcatatgag
cagatcttcaagcctgtgatgtccaaggtgatggagatgtatcagcccagtgctgtggtt
cttcagtgcggtgcagactctctctcaggagaccgcctaggctgttttaatctcaccatc
cgcggacattccaagtgtgttgagtacataaaatccttcaatctcccgctgctcatgctg
ggcggaggaggatacaccatccgcaacgtggcccgctgctggacctatgagacagctgtg
gctctggacacagacatccccgacgagctgccgtacaatgactacttcgagtacttcggg
cctgacttcaagctgcacatcagcccctccaacatgaccaaccagaacacacaggagtac
atggacaagatcaagcagcggctgtttgagaacctgcggatgctgcctcatgctcctgga
gtgcagatgcaggccatcccagaggacgctgtcccaggcgacaccgtggacgaggacaca
gaggatcctgacaaacgcctgtccatccgcgccacagataagaggatagcctgtgatgaa
gagttctccgactccgaggacgagggggagggaggcaggaggaatgtggccaatcacaag
aagggagcaaaaaggcagagagtagaagaagacaagaaggaaggcgaggagaagaaagct
gagatgaaagaagaggagaaaacaaaagacagcagtgctgagaagactgactcaaaaagt
gtcaagactgagcagacgagcagtgcctga

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