Thunnus thynnus (Atlantic bluefin tuna): 137169712
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Entry
137169712 CDS
T11154
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137169712 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137169712 (hbs1l)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137169712 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
137169712
NCBI-ProteinID:
XP_067429135
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Position
18:14918410..14941603
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AA seq
701 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDMYGQSVDDDYCISPATANQFIYSRQERQAPREEPLEEEDY
EDEDVPMSPTVSHNLDPLDQAKLYSCLDHMRTVLGDAVSDSVLSQAAIKCGFDPQRALDA
VLSEDTKTAPVAKTTIEETASVLRVCQEKAPLPQRTKQAAVIEKAKSRDVSHNKLDSEVV
PKVARMTVSGKKQKMGFDVPSTGENGVVTTSVRRGGSPENATATPASEATSKRPETPSKG
SNGDEPAPVPTPGRSGKAKQTINVKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYL
LGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNTKVVTLM
DAPGHRDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVIQLAV
AVNKMDQVNWQQERFQEITSKLGHFLKQAGFKESDVFYIPTSGLSGENLITRSSVAQLTS
WYSGPSLLEQIDAFKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRILAM
PPNETCTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPIRVCTRFRA
RILLFNIEVPITQGFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLGKGMNAIV
EIQTQRPVSLELYKDYKELGRFMLRYIGSTIAAGVVTEIKE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgtccgaggttacaactacgatgaagactttgaagatgatgac
atgtatggacaatctgtggatgatgattactgtatatcaccagcaacagcaaatcagttc
atctactcacgtcaagaaaggcaagcaccaagggaggagcctttagaggaggaagattat
gaagatgaggatgtacctatgtctcctactgtcagccacaatcttgaccctcttgatcaa
gcaaagctgtactcctgtctggaccatatgcggactgtgctgggagatgcagtgtcagac
tcggtcttgagccaggcagccataaaatgtggatttgatccacagagggcactggatgca
gtcctgtctgaagacactaaaacagccccagttgccaaaactaccattgaggagacagct
tctgtactgagagtttgccaagagaaagcaccacttccacaaagaaccaaacaagcggcc
gtgattgaaaaagcgaaaagcagagatgtgtctcacaataaactggactctgaagtggta
cccaaagtggcccgcatgaccgtctctggcaagaagcagaaaatgggctttgatgttccc
agcacaggggagaacggcgttgtcaccacttcagtacgtcgaggtggcagccccgaaaac
gccactgcgacacctgcttcagaggccacctccaaacgtcccgagacaccttctaaaggg
tcaaatggagacgagcctgccccagttcccactccaggccgctctggaaaagccaagcag
accatcaatgtaaaggctgaactggaaaagagacaggggggcaaacctctgttaaatctg
gtggttataggtcatgtggatgcagggaagagcacactaatgggccacctgctttatctg
ctgggcaacgtcaacaagcgtaccatgcacaagtatgaacaggagtcaaagaaggcaggc
aaggcttcttttgcctatgcttgggtcctggatgaaaccggcgaggagagggacagaggt
gtgacaatggatgtgggcatgaccaagtttgagacgaacactaaagtggtgactctaatg
gatgcgccagggcacagagacttcattcccaacatgatcacaggagctgcacaggcagat
gtggcggtgcttgtggtggatgccagccgaggggagtttgaggcaggcttcgaggcaggt
ggtcagaccagagagcatgccctgttggtgcgttcacttggcgtcattcagctggctgtg
gctgtcaacaagatggaccaggtaaactggcaacaagagcgtttccaggaaatcacatcc
aaacttggccattttctcaagcaagcaggattcaaggagtcagatgttttttacatcccc
accagcggcctgtcaggagagaacctcatcaccaggagttcagttgcacaactcacctct
tggtactcaggacccagcctgctggagcagattgatgccttcaaagcccctcagaggtct
gtggacaaacctttcagactgtgtgtctctgatgtattcaaagaccagggttcaggcttc
tgtgttacagggaagatcgaggctggttatattcagacaggagacagaatactggctatg
ccccccaatgaaacatgcactgtcaaaggtatcacgctgcatgacgaggctttggactgg
gctgcagcaggagatcatgtcagcctgacggtcactggcatggacatcatcaagatcaat
gtcggctgtgtgttctgtgatcccaaggagcctattcgagtgtgcacccgattcagagcc
cggatcctcctcttcaatatcgaggtccccatcacacaaggtttcccagtattgttgcat
taccagacagtcagtgagccggccactattaggaaactgataagtgttctacataagagc
agtggtgaagtcctcaagaagaaaccaaagtgtttagggaagggtatgaatgccattgtg
gagatccagacccagaggccggtgtcattagagctttacaaagactacaaggaactcggc
cgcttcatgctgcgctacataggctccactattgctgcaggcgtggtcactgagatcaaa
gaatga
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