Thunnus thynnus (Atlantic bluefin tuna): 137170365
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Entry
137170365 CDS
T11154
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tty03021
]
137170365
Transcription machinery [BR:
tty03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
137170365
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
137170365
NCBI-ProteinID:
XP_067429780
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All DBs
Position
19:14560672..14641762
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AA seq
2118 aa
AA seq
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MTTTTNWVANGASLEDCHSNIFSLAELTGIKWRCYSFRSGGEYGPVISAPAQDDPVLRSF
MRCVQANLLCVWRRKIKPDAKELWIFWWGEEPNLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAVHNLLERCLMDKGFVRTGKWFFKPHELEEKSLGNSEHLSCSFSFFLHGESNVCTS
VEIAQHQPAYHITENHIRLAQTSITPVQVILSPYGLSGTLTGQAYKMSDPATRKLMEEWS
YFYPMVLQQKEGSGEKEKDEASQVYDRNCHVAVEVIVGGVRMTYPAAFVLIAQGDLPVEQ
PPPVPAAQGLTREQNHCSVPLTPPTSPEQPCSADSGFVTSVSSVPTPDSSMGVTSISPKH
SVKKLTCHVVHQAWRECYLNQPQHVRNQPTDVTPKKEVPNGVSTWDFNDLGARAPCSCSR
LKQQKLNMTTTSTANPQTSANTTQSSGPSLYPPSLPKHKTSDKTEKADKQSKRPAMIPFH
HRVSVTQETPLEQDSPGGPQLGDLVALEPPLEPLATLANCKYPKPLSNGRKAPESLLLSP
MSPLPPTLSPHPRVQDPEVLDGPVDMHVCPDGASGLGVITSETAVYTALLRLRENGAGWW
RGFRTPRSDKTDCRPAELPIDKLEEVKVDTATEGTPLKRLYTQTHKRFKISEERVRDHVQ
TLGLFQQPVVEALREPGDDPYDFKEGDIEYTFSTSKRLKSQGREPSKKAKGEEITSNGAL
PDGKDAMSIFNSAPKSDESSQDDGAAKANPSLTREKDLVVNISDLDNIFDEDEEELGTVY
PNQHSTKLPVSTEDRPLGKEGRVAVPYPSTVADLQRMFPTPPSLEQHPAFSPIMTYRDTP
SQEPPAPSGAADHLPPLASAQLTEYRMEMEEDMISPRQEDFKPQIGSSMFAPLSCLPSQS
LPPLKIPEQCFYRPSWALMPKMEHFPTVMHPQNTTFIRDGYTNVPSVNTLTDQEYGQMSA
TTASVSTTVGILPSPATPRFSVPTPRTPRTPRGINTASSGQGSVKQDGTELSSPVSTPST
SLPLSSVEPLARPGPSLPEAHSLYAILLLSDSVLNVFKDRNFDSCCICACNMNVKGADVG
VYIPDSTCEDQYRCMCGFSAIVNRRLAHGTGLFLEDELDIYGRSSEVGRAAERRLALCRR
DPTMGDPRAKRPQDAAPASPSVMILLQEQCSQPISSLASLHLPISCSCHGRKGALLQSWM
SEKQWADGSDACVECYNALEQGLQYVDNPTGGKVDPAVVRSTALHSWPHTNVVDMSMLSS
QDMVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPL
PIPTVLLGYDRERDFLALSPLALPFWEKLLLEPYGGQRDVAYLVLCPNSPSLLAAARAFF
QELSAVYETCRLGKHRPLAKVSRDGIVRVGEEVEPEKLEELDVDQWLTGPWAGQQHTDNL
RKLKLYAYACKQQLGPQLSGLPLDSSLLLPPKVQPPINPTSSTQSASAGQPQAWATDAEP
APGTLSSANASTPTGATSGQIGETTHGGTSESKGPSSATPPANTPAENPELTAEQSRIGI
PTVAESMDSHTNPPAIVIYIVDAFLSSSGTRNEGGEEEEADDVEAGSIWLLGLLRCYTEM
LQTLPETMRPALMLQVVPCQYLLQPASGESHLYLQHLRSLAFSCYSQCRRLMPQQTHIKS
LTGFGPVSTVNSVLKSPEHPSPLQLYCPPFVLGPTRPKQPEPGEIWAEIPPKYNVLFVGY
CLSHDQRWILVSCTDQQGELLETCIINIDVPNRARRPKVSARKMGLQKLWEWCIGIIQMT
SLPWRIVIGRLGRLGHGELKDWSSLLGEHSLHSIGRQLREACRMCGISAADSPTILSACL
VAMEPQGSLVIMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAPS
SYPTEDNNDDMFDLPFADELENDIGHDMMLITGNLHSPPNTSPVPSPGSPSGMGMGSHFQ
HTRSQGERLLSRDNPPEELKQQPLALGYYVSTAQANGLPHWFWASCPQAESQCPLFLKAS
LHHHISIAQSDELVSDKTKRTPHPLDSKTTSDVLRFVLEQYNALSWLTCTPSTQDRQSCL
PVHLAVLIQMYNAILNML
NT seq
6357 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacaacgaattgggtggctaacggggcaagccttgaggactgccactccaac
atcttctctctggcggagttgacaggcatcaaatggcgttgctacagcttccgcagcggc
ggggagtacggtccggtgatctcggccccggcccaggatgacccggttctgcgcagcttc
atgcgctgcgtgcaggccaacctgctgtgtgtatggcgacgcaaaatcaagcccgatgcc
aaggagctgtggatcttctggtggggtgaagagcccaacctctctgatgtcattcatcat
gagctggaagtggctgaggaggggctttgggagtgcgggctgtcctacgagtgccggact
ctcctgttcaaggccgtacacaacctgttggaaagatgtttgatggataagggttttgtg
aggactgggaagtggttcttcaagccacatgaactggaagaaaagtctttgggcaacagt
gaacacttgtcatgctccttctccttcttcctccatggggagagcaacgtgtgcacaagt
gtggagattgcccagcaccagcctgcgtaccacatcacagaaaaccacatccgccttgca
cagacctccatcacaccagtacaagtgatcctgagcccgtacggtctgagcggcactcta
acaggccaggcctacaagatgagtgacccagcgacacggaagctgatggaggagtggagc
tacttctatcccatggtacttcagcagaaagagggaagtggagagaaggaaaaagatgaa
gcgagccaggtctacgatcgcaactgtcacgtggcggtggaggtcatcgtaggtggagta
aggatgacctacccagctgcttttgtgctgattgcccagggggacctgccagtggagcag
cctccacctgttcctgcagctcagggtctcaccagagagcagaaccactgcagtgtgccc
ctcacaccgccaacgtcaccagagcagccctgctcagcggacagtggctttgtgacttcc
gtctccagtgtcccaacaccagacagcagcatgggggtcaccagcatcagcccaaagcat
tctgtgaagaagctgacttgccatgtggtccatcaggcctggagggagtgctatctcaac
cagcctcagcatgtacggaatcagccaactgacgtgacgcccaagaaggaagtgccaaat
ggagtatccacgtgggacttcaacgatctgggagcgagagcgccctgcagctgctccagg
ttgaagcagcagaagttgaatatgacgaccacgtccactgccaacccccagactagtgcc
aataccactcagtcctctggcccatcattataccctccctccctgcccaaacacaagacc
agtgacaagacagagaaggctgacaaacagtccaagaggccagccatgatccccttccac
caccgtgtatctgtcacgcaggagacccctctggaacaggactcaccaggagggcctcag
ctcggtgatcttgtggcgctggagccacccttggaacctctggctacgctggcgaactgc
aaatatcctaagcctctctccaatggcaggaaagctccagagtccctcctcctttcgcca
atgtctccgcttcctcccacactcagcccacatccccgggtgcaggacccagaggtcctg
gatgggcctgtggatatgcatgtctgtccggacggggcttcagggctgggggtgattacc
agcgagacagctgtgtatacagctctgctgaggctgagggagaacggggctggctggtgg
agaggcttcagaactcccaggtctgataagactgactgcagacctgcagaactccccatt
gataaattagaggaagtgaaggtggacacagccactgagggaactccgctaaagagacta
tacacacagactcacaagagatttaaaatctccgaggagagggtgagggaccacgtccaa
actttgggtttgttccagcagccagttgtggaggcactgcgggagcctggggatgatccc
tacgactttaaggaaggagacattgagtacactttctccacttccaagagattaaagagt
caaggacgagaacccagcaagaaggccaagggagaggaaatcaccagtaatggcgcgctg
cctgatgggaaagacgccatgtccatttttaactccgctccaaaatcagatgaatcaagt
caggatgacggagctgccaaagctaatccttctctgaccagagaaaaagacctggtagtc
aacatctctgatctggacaacatatttgatgaagatgaggaggagctagggactgtttac
cccaaccagcactcaaccaagctaccagtatcgacagaagatcgccctctggggaaggaa
gggagagttgcagtaccttatccatcaacagtagcagacctccagcggatgttccccacc
ccaccttctctagagcagcatccagccttctctcccatcatgacgtatcgtgacaccccg
agccaagagccccctgcaccgagcggagcagctgaccaccttccgcctttagcctccgcc
cagcttactgaatacaggatggagatggaagaggacatgatcagtcccaggcaggaggat
ttcaagccacagataggctcttccatgtttgctccactttcctgcctacctagccagagt
ctaccaccactcaagattcctgagcaatgcttctaccgtccatcctgggctctcatgccc
aaaatggagcatttccccacggtcatgcatcctcagaacaccactttcatcagggatgga
tacacaaacgtccccagtgtcaacaccctcacggaccaggagtatggccagatgagtgcc
accactgcttctgtgagcaccactgttggcatcctcccctctcctgccactcctcgtttc
tctgtgcccactccacgcactccgcgtacaccaaggggtattaacactgcaagctctggg
caaggttcagtgaagcaggatggtactgagcttagctcaccagtctccaccccctccacc
agcctgcctcttagctcagtagaacccctagctcggccaggaccctccttacctgaggcc
cacagcctgtacgctatcctcctgctctcagactccgtcctcaatgttttcaaggatcgc
aactttgacagctgctgtatctgtgcctgcaatatgaatgtcaaaggagcagatgtgggg
gtgtacatccctgattccacctgtgaggatcaataccgctgtatgtgtggcttcagtgcc
attgtgaacaggcgtttggcccacggtacaggcctcttccttgaagacgagctggatatt
tatggtcgctcctctgaggtgggacgggcggctgagaggaggctggctctttgccggcgg
gacccaactatgggagacccaagagccaagcggccccaggacgcagctcctgcctctccg
tcagtcatgatcctcctacaggaacagtgctcccagcccatttcttccttggcatcactg
catctccctataagctgttcctgccatggccgcaagggggcactgctccaaagctggatg
tctgaaaagcagtgggcagatgggagcgatgcctgtgtggagtgttacaatgctctggaa
caggggctgcagtatgtggataatcccacaggagggaaagtagatccagctgttgtcaga
agtacagctcttcactcctggcctcatactaatgtggtggacatgagcatgttgtcgtcc
caagatatggttcgtatgctgctttcactgcagcctttcctgcaggatgccatccagaag
aagagaacagggcggacctgggaaaacatccagcatgttcagggtccactcacctggcag
cagttccataagatggctggaaggggctcctatggttcggaggagtcaccggagcccttg
cccatccctacagttttactcggttatgaccgggagcgtgacttcttagcgttgtcccct
ttggcattgcctttctgggagaagttgctgctggagccttatggtgggcagagggatgtg
gcatatttggtgctgtgtcccaatagcccttctctgctggctgcagcccgggcattcttc
caggagctcagcgctgtttacgagacatgccgccttgggaagcaccgtcctctggccaaa
gtgtccagggatggcatagtgcgtgtgggggaggaggtggagccagaaaagctggaggag
ttggacgtggaccagtggttgactggaccctgggctggacagcaacacaccgacaacctc
agaaaacttaaactttacgcttatgcctgcaagcagcagctaggtccccagctatcaggc
ctgcctttggacagcagtcttctgttgcctcccaaagtccagcctcccataaaccccaca
tcctcaacccagtctgcctctgctgggcagcctcaagcttgggccactgatgcagaacca
gcaccggggactctcagttcagcaaacgcttcgaccccaactggagcaacctcaggccaa
ataggggagacaacccacggaggaaccagcgagtctaaagggccttctagtgccacaccg
ccagccaacacaccagcagaaaaccctgaactcactgcagagcaatccagaatcggcatc
cccactgtggctgagtcaatggacagccacaccaacccaccagctatcgtcatttacata
gtggatgcttttctcagctcaagtggaacacgaaatgaagggggagaggaagaagaggct
gacgatgtagaggcaggaagcatttggctactagggcttcttcgctgctacacagagatg
ctacagactttgcctgagaccatgagacctgcactgatgctacaggtggtgccgtgccag
taccttctccagcctgctagtggggagagccatttgtaccttcaacacctgcgctccctg
gctttctcctgttactcccaatgcagacgtctgatgccccagcaaacacacatcaagtcc
ctgaccggctttggaccagtgtccactgtcaattctgtgcttaagagtccagagcatccc
agcccactgcagctgtactgtcccccatttgtccttggtccaacccgtcccaaacagcca
gaaccaggagagatatgggcagagatccctcccaaatacaatgtgctctttgttggatac
tgcctatcacatgaccagcgctggatcctggtgtcctgtactgaccaacaaggagagctc
ttggagacctgcattatcaacattgatgtacccaacagagcacggcgtccgaaggtgtca
gccaggaagatggggctacagaagctgtgggagtggtgtattggcatcatccagatgacc
tcactgccatggaggattgtgattggtcgattaggcagactggggcatggagagctcaaa
gactggagctcgctccttggggagcactctctccactcaatagggcgccagctgagggag
gcttgtcgtatgtgtgggatctcagctgctgactcccccactattctcagcgcctgcctg
gtagccatggagccgcagggctccttggtgatcatgcctgatgcagtgaccatggggtca
gtgtttggccgcagcaccgccctgaacttgcagacctcgcagctgaacacacctcaggat
gcttcctgtacacacatcctagtcttcccaacttctgccaccacccagttggcaccgagc
tcctaccctactgaggacaacaacgatgacatgtttgacctgccctttgctgatgaactg
gaaaatgacattggccatgacatgatgctgatcacagggaacctccactctcccccgaac
acctctcctgtgccctcgcctggctctccgtccgggatgggaatgggatcacatttccag
cacaccaggagccagggagagcgcttgctgtccagggacaatccaccagaggagctaaag
cagcagccactggctctgggctactacgtctccaccgcacaagcgaatggacttcctcac
tggttctgggcttcctgcccacaggctgagagccagtgtccacttttcctcaaggcctct
ctccaccaccacatctccatagcccagtcagatgagctagtgtcagacaagaccaagagg
acccctcaccccttagactcaaagaccacctctgatgtgctcaggtttgtattggagcag
tacaacgccctctcctggctgacatgtacaccttccacccaagaccgccagtcctgcttg
cccgtccacttggctgtactgatccaaatgtacaacgccatcctgaacatgctttag
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