Thunnus thynnus (Atlantic bluefin tuna): 137170463
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Entry
137170463 CDS
T11154
Symbol
whrna
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tty03037
]
137170463 (whrna)
Cilium and associated proteins [BR:
tty03037
]
Primary cilia and associated proteins
USH complex and associated proteins
137170463 (whrna)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
USH1C_N
DUF6288
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
137170463
NCBI-ProteinID:
XP_067429984
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All DBs
Position
19:complement(24022794..24162593)
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AA seq
978 aa
AA seq
DB search
MSNTDLERMSLSSSANSVASSARTLSANVRKLHNALNLLLNDFEREQFIHCLNVYHSKRN
VYDLVQTLNVILNAPSKRQLLPMLRLVIPRSDQLLFEQYTSEGLYLKSDLVASNGNAEPP
PGDFPSASPTPPGHFSPNNPPEFQVALRGSPDSFSTSSDGTAPLVPLLGRNFIHEPPGEL
RQVTMKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRIGDQIMKVNDKVFDK
VTHAEAVKVLKGSKKLCLSVRSVGRIPGGYVTNHVYTWVDPQGRSVSPPPDLPEHRSATL
RRTDSQRRSNMQLLQDGDEKKVNLVLDDGRSLGLMIRGGAEYALGIYITGVDQGSAAECG
GLKVGDQILEVNGRSFLGIPHDEAVRVLKSTRHLMMTVKDVGRLPHARTVVGETKWIASS
QIAESSANSSVAGFSMDQGASAAGKPGFYKGVAGSQVTLSSLVNQSRAMLEEQARHLLTE
SERQTMGYYVEEYRDGHIGVEQLVMALFELLNTHAKFSLLSEVRGLVTPQDLERFDGLVL
RREIQALKARQGTAGATALQPDSLSMVSYPDTLTSSSASFMTNTTLSSARERLLWLIDMM
ENDSVVESNQEDPPESLNTLLTDISLDDVQSTTAESPPSFKPPPPPGGQRRPSRQDQHNK
CPSSESSHSGLYFTAPTSHNHSKDPGHPPASPSLHHKREHPRDPSRDYAPIRKREPSAPS
KKEQITAAQLSMVSQHNIGPFPRVQSPGRGTKPAAPSPSPPPPPPLPAPPPPPALPLKPV
SMSKASAASSPGTKQQFVTVEVHRPNAEPDVNEVRPLPQARGGALSQLSDSGQTLSEDSG
VDIAESGHFSKDSSSHSTRTRHPQDTQGGGGDNPSKPPGLLEPTSTLVRVAKSASTLGIA
IEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGQVILEVNGVSLRGREHKDAARLIAEAFK
TKERDYVDFLVTEFNVAL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataccgacctggagcgcatgtcgctcagctcctcggccaactctgtggcctcc
agcgcgcggacgctctcggccaacgtgaggaagctgcacaacgcgctcaacctcctgctt
aacgacttcgagagggagcagttcatccactgcctcaacgtctaccactccaaacgcaac
gtgtacgacctggtacagaccctcaacgtcatcctcaacgcgcccagcaagcggcaactt
ctgcccatgttgcggctggtcatcccgcgctctgaccagctgctcttcgagcagtacact
tcggagggcctctacttaaaatcggatttagttgcgagcaacggcaacgcggaaccccca
ccgggcgacttccccagcgccagcccgactcccccgggacatttctcgccaaacaacccg
cccgagtttcaggtggcactgcggggctcgccggacagcttcagcaccagtagcgacggg
acagctcccctggtgcctctcctcgggaggaactttatccacgagccgccgggtgagttg
cggcaggtcacgatgaagcggcacaagagcaacgagggcctgggcttcagcatccggggc
ggctcggagcacggggtcggcatctacgtgtccctagtggagccggggagcctggcggag
aaagagggtctccggatcggggaccagatcatgaaagtcaatgacaaagtcttcgacaaa
gtcactcacgctgaagcagttaaggtgctgaagggcagtaaaaagctttgtctttctgta
cgttcagtcggccggattccaggcggctatgtcaccaaccatgtttatacctgggttgac
cctcagggtcggagtgtgtcccctcctcctgacctgcctgagcatcggagtgccaccctg
agaagaactgacagccagcgacgcagcaacatgcagctactgcaggacggagatgaaaag
aaggtcaacttggttctggacgacggccggtctctgggtctaatgatccgggggggagct
gaatatgctttgggtatttacatcacgggagtggaccagggatcagcagcagagtgtgga
ggactcaaggtcggtgaccagatcttggaggtgaacggccgcagcttcttgggcatcccg
catgacgaagccgtcagggttctgaagtcgacacggcacctgatgatgacggtgaaagac
gtgggacgcctgccgcacgccaggacggtggttggggagaccaagtggatcgccagctcg
cagatcgcagagagctccgccaacagcagtgtggcaggcttctctatggatcaaggagcc
tctgcagcaggaaagcctgggttttataagggcgtggcgggctcacaggtgaccctgtcc
agcctggtgaaccagtcccgggccatgctggaggagcaagcacgccacttgctgacagag
tcggagcggcagactatgggctactacgtggaggagtaccgggacggacacatcggtgtg
gagcagctggtcatggcgctgttcgagctgctcaacacgcacgcaaagttctctctgttg
tcggaggtgcgaggcctggtcaccccgcaggatctggagcgttttgacgggctggtgctg
cgacgtgaaatccaggcactaaaggcgcggcagggcacagctggagccacagcgctccaa
ccggactccctgtccatggtgtcgtacccagacaccctgacctcgtcttcagccagcttc
atgaccaacaccaccctcagctctgcacgggaaaggctgctctggctgatagatatgatg
gagaacgacagcgtggtggagagtaatcaggaggatcctccggagagcctgaacacgctt
ctgaccgacatctctctggatgatgtacagtccaccacagctgaatctcccccctccttc
aagcctccgcccccaccaggggggcagaggcgcccaagtagacaagaccagcacaacaaa
tgcccctcgtccgaatcttcccactcaggcttgtacttcacagccccgacctcccacaac
cacagcaaagacccaggacacccccccgcttcaccctcgctacaccacaaacgagagcat
cccagggacccttctcgggactacgcccccatccgaaagagagaaccctcagcaccttcc
aagaaagaacaaataaccgcagctcagttgtccatggtctcccagcacaacatcggccct
ttccccagggtccagtcccccggcagaggcaccaaacctgcagccccgtccccctcacct
ccgcctccgcctccactccctgcacctcctccgcctcctgctctgccccttaagccagtg
tctatgtccaaagcctccgccgcctcctctcctggcactaaacaacagtttgttacagtg
gaggttcacaggcccaacgcagagcccgacgtcaatgaggtgcggcccctgccccaagct
cgaggtggcgccctgtctcagctgtcagacagcggccagactctcagcgaggacagcggg
gtggacatagctgagtcaggacatttcagcaaagacagcagctcccattccacacgcaca
cgccacccccaagacacccaggggggcgggggggacaacccctccaaaccgccagggctg
ttggagcccacatctacactagtgagggtggcaaagagtgccagcaccctgggtattgcc
attgaaggtggagccaatactcgacagccactgccaagaattgtcacaatacagagggga
ggttcagctcataactgcggccagctgaaggtgggtcaggttatcctggaggtgaacggc
gtttccctgaggggccgtgagcacaaggacgccgcacgcctcatcgctgaggccttcaag
accaaagagagggactacgtggacttcctggtgactgagttcaatgtagcgctatag
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