Thunnus thynnus (Atlantic bluefin tuna): 137171296
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Entry
137171296 CDS
T11154
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137171296 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137171296 (nup188)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137171296 (nup188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup192
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
137171296
NCBI-ProteinID:
XP_067431330
LinkDB
All DBs
Position
19:10305589..10321778
Genome browser
AA seq
1751 aa
AA seq
DB search
MAGTKMAESEMSVRSCRELWTILLGRSALREPAQIEAELDRHWDRLHQGLSYYKSPSSSS
AGKVKENKDVAQPLKDFGLRISKLLGLDEQQSVQLLQCYLQEDYRGTRDSLKVVLKDERQ
SQTLLLKIADYYYEERMCLLRCVLLLLTYFQDERHPYRAEYSNCVNKLEKDLVSNYQSQF
ENLFKAEAPTWETHGNLMTERQVSRWFLQCLREQSLLLEIIFLYYAYFEMSPSDLLSFTK
MFKEQGFGLRQTNRHLVDKSMDALVDRIGYLSSLILVEGMDIDFLHKCALEDCTEQHQFS
SAPDVVKEMDQLLLTFGDIPHHGPVLLAWVLLRHTLRPDESSPVVRRIGNTALQLAVFQY
LSTMLKGLGVSGNNCTASTAKMCIYGLLSFVIISFEEESLQADGVATQCSHLIDAACEVL
SAPSLAEVFWEMKPNMGLGMILDSAVGMFPHKIGPLLQLLTALLSNKSTVKKVYNFLDKM
SFYTQVYKHKPNDIISKDDETLWRRQTPKLLYPLGTGQTNLWMPQGVLGQVMIGGEQGYV
VRWDYSYSSWTLFTCEVEMLLHVVSTADVIAHCVRVKPILDLVHKIISTDWTVSDCLLPL
TSRIYMLLQRLTSVINPPVDVIASCVNCLSVLAARMPGKVWSSLHHTGFLPFASNPLTSM
AQCVSAEGMKAGNYGNLLVQIEQPRGEYAVTIAFLRLITTLVKGQLGSTQNKGLIPCVLL
VLKEMLPTYHKWRYNTYGVRERIGCLILELIHAILNLSPEGEDQGSTPTLQSLCIYSLAN
TEAGQAVVNIMGVGVDTIDVVLAAQPSSCGSEGPGQILIQTVKLAFSVTNNVIRLKPPSD
VVSPLEQALTQHGGHGNNLIVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGS
DAAAIRDAFLTRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSEGSKEFL
LGEWSCLHVVLDLIDSKQQGKYWCPPLLHRAALAFLLALWQDRRDSAISVLRTKDRFWEN
LTTPLFGTLTPPSDTTEPCVLETCAFVMKIIGLEIYYVVSGSLEQSLKDSLQKFSNARRY
EYWSQYVKSLVCHVAEMEEEGICYFAETQMLISAWRMLLILSTSHSDVMQLTEDSTKLKL
FMDVLDGTKAALTTPMSVPCLRLGSMMATLLLILLKQWRGVVATAPDILSPLSLILESVL
QADQQMMERTKAKIFSALISVLQIQGLNGGEISQLPQLLLSVCETVKDEALALIDNTRHM
SQMGDTVEEEDSMETDSPRGPQKDKRDGVCVLALHLAKELCRTDEDGEHWVSVMRKVPVL
PSVLSAVELSLRSKHNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQTICLPLLSVYEVS
SNGSSQSFSRKSQDSACWPGVYRLCMSLMESLLKTLRYNFINEALDFVGVHQERILQCLN
AVRTVQSLACLDEADHTVGFLLQLSSFCKEWQFHLPKLLRDIQVNLCYLCQTCTYLLHSK
KMLHHYLQAKNGEALPPGPLPRTQRPPQTPSKEAAGGGEREEAEQKALLAVQCSLLKILS
KTLATLQHFTPDCCQILLDQCMDLAEYRTLFVLSFTTPAFDPDVAPSFGTLLATINVALS
MLSEMEKKKEPVSLSIASLASSEELQALKSLLMFTMENCFYVLISQAVRCLKDPSILPRD
KQRLKQELSSELSTLLSSLSRHFRRGSPSSPASGILPSTQSKPPTPGSKGSHEGQEPIIQ
LVQAFVRLVQR
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaacgaagatggcggaatcggagatgagcgtcaggagctgtcgagaattatgg
accatattactgggaagatcagcactgcgagagccggctcagatagaggcagaacttgac
agacactgggacagactacatcaaggactcagttactacaagtcacccagttcctcttct
gctgggaaagtgaaggagaacaaagatgttgcacaaccattgaaggattttggtctgagg
atcagtaaactgctgggtcttgatgagcagcagagtgtgcagcttttacagtgttactta
caggaggactacagaggaacccgtgattcattaaaggttgttctcaaggatgagcgacaa
agccagacgctgctgttgaagatagcggactattactacgaggagcgcatgtgtctgctc
agatgtgtcctcctcttgttgacatactttcaagatgagcgacatccctacagggctgag
tactctaactgtgtcaataaactggagaaggacctagtgagcaactaccagtcacagttt
gagaacctcttcaaagcagaagcaccaacatgggaaacccacggaaacctgatgacggag
aggcaggtgtcacgttggttcctgcagtgtctgagagaacagtctctgctgctggagatc
atcttcctgtattatgcgtactttgagatgagcccgtctgacctgctgagcttcaccaaa
atgttcaaagagcagggttttggtttgcggcagaccaacagacacctagtagacaagagc
atggatgcgctggttgaccgtatcggatacttgagctctctcatcctggtcgagggaatg
gacatagacttcctgcacaagtgcgccttggaagactgtacagagcagcatcagttctcc
agtgctcctgatgttgttaaggagatggatcagctgctgttgacgttcggtgacatccct
catcatggtcccgtgctgctggcctgggtcctgctgagacacacgctgagaccagacgag
tccagccccgtggtcaggaggataggcaacaccgctctgcagctggcggtgtttcagtac
ctttcaaccatgctgaaaggtctcggagtctcagggaataactgtacagcgagcacagca
aagatgtgtatctacggcctcctttcatttgtgatcatttcttttgaagaggaaagctta
caggccgacggtgtggcgacacagtgctcccacctgatcgacgcggcctgtgaagtcctc
tctgctcccagtctggctgaagtcttttgggaaatgaagccaaacatgggattgggaatg
atcctggacagtgcagtcgggatgttccctcataagatcggaccgttgttacagctacta
actgcacttctgtcaaacaagtcgactgttaaaaaggtgtacaactttttagataagatg
tccttctacacacaagtttacaaacataagcccaacgatatcatctccaaggacgacgag
acactgtggaggagacagacgccaaaacttctctacccgcttggcacagggcagactaac
ctgtggatgccacaaggagtgctgggccaagtgatgatcggaggcgagcagggctacgtg
gtgcgctgggattactcctacagctcctggactctgttcacctgtgaggtggagatgctg
ctccatgttgtttcaaccgcagatgtcatcgctcactgtgttcgtgtgaagccgatcctg
gatctggtccataagatcataagcacagactggaccgtgtcagattgtctgttgcctctc
acttcacgcatatacatgctgctgcagagattaacgtcggtcatcaaccctccagtggac
gtgatcgcctcctgtgtgaactgcctctccgtactggctgcaaggatgccagggaaggtg
tggtccagtctgcaccacacaggtttcctcccctttgcctccaaccctttgaccagcatg
gcccagtgtgtgagcgctgaagggatgaaagcaggtaactatggcaacctgctagtccag
attgagcagcccagaggggagtacgctgtgaccatcgccttcctccgtctcatcacaacc
ctggtcaagggtcagctcggcagcactcagaacaaaggcctgatcccctgtgtgctgctc
gtgttaaaggagatgctgcccacgtaccacaagtggcgttataacacatacggggtcagg
gagaggataggttgtcttattctggagctgatccatgccattctcaatctgagcccagag
ggagaggatcagggcagcactcccaccctgcagtctctgtgcatctacagcctggcaaac
actgaggctggacaggcagtcgtcaatatcatgggagtcggagtggacaccatcgatgtg
gtcctggctgcacagcccagcagctgcggctccgagggtcctggtcagatcctgatccaa
acagtcaaactggccttctctgtcaccaacaacgtcatccgtctgaagccgccgtctgat
gtcgtgtcccctctggagcaggccctgactcagcacggcggtcacggcaacaacctcatc
gttgtcctggccaaatacatttaccacaaacacgacccggcgttgcctcggctcgcaatc
cagctgctcaaaaggctcgccacagtggctcccatgtccgtctacgcctgcctcggcagc
gacgcagcagccattcgggatgcgttcctcactcggctccagagcaagacagaagacatg
aggatcaaagtcatgatccttgaatttctaaccgttgccgtggaaactcagcccggcctc
atcgagctcttcctcaacctagaagtcaaagatggcagtgaggggtcaaaggagtttctg
ctcggtgagtggagctgcctccatgtggtgttggacctgatcgactccaaacagcagggg
aagtattggtgtccccccctgctccaccgagcagccctggccttcctcctggccctctgg
caggaccgcagagatagcgccatctcagtattacgcaccaaagacaggttttgggaaaat
ttgacaacacctctcttcggaacgctcaccccaccgtcagacaccacggagccctgtgtt
ctggaaacttgtgcttttgtcatgaaaatcatcggcctggagatctactacgtagtcagc
ggctccttggagcagtctctgaaagacagtcttcagaagttctccaacgcgcgacggtat
gagtactggtcccagtatgtcaaatctctggtttgccacgttgcggagatggaggaggaa
ggcatctgttacttcgcagagacccagatgttgatctctgcctggcggatgctgctgata
ctctccactagtcactcggatgtgatgcagctaacggaagactcaaccaagctgaagctt
ttcatggacgtgctcgatggaactaaagctgctcttacgacacccatgtctgtgccttgt
cttcgtctcggatccatgatggccactttacttctcatcctcctcaaacagtggcgaggc
gtggtagcaacagctcctgacatcctgtcccccctctccctgatcttggagtctgtccta
caagctgaccagcagatgatggagaggaccaaagccaaaatcttctctgcgctcatttct
gtgctgcagattcagggactcaacggcggggagatttcccagctgccccagctgttgctg
tctgtgtgcgagacggtgaaagacgaggccctggcgctcatagacaatactcgtcacatg
agccagatgggagacacggtggaggaagaggacagcatggagacagactctccccgcggc
cctcagaaggacaagagagacggggtgtgtgtactagcgctgcatttagcgaaggaactg
tgtcgcaccgacgaggacggcgagcactgggtctcggtgatgaggaaggttcctgtcctc
ccctcggtgctcagcgccgtggagctcagcctgcgatccaaacataacctctacttcaca
gaggctgcgcttcacctgctgctcacgctggcccgcacccctcagggggcagcagctgtt
gctggagcaggagtcatccagacaatctgcctccctctcctcagcgtgtatgaggtctct
tcaaacgggtcgtcacagagtttctcccgtaagtcccaggactccgcctgctggccgggt
gtgtatcgcctctgcatgtccttgatggagagtctgctcaagactctgcgctacaacttc
atcaatgaagccctggactttgttggggtgcatcaagaacgcatattacagtgtctgaat
gcagtgcgaacagtgcagagtctggcgtgtttggacgaggcggatcacaccgtcggcttc
ctgctgcagctctcaagcttctgtaaagagtggcagtttcacctgcccaaactgctccga
gacatacaggtaaatctgtgttacttgtgccagacctgcacatatctgctccatagtaag
aagatgctccatcactacctccaggctaaaaacggtgaggcgttgccccctggtcccctc
cccaggacacaacgccccccccagaccccgtctaaagaggcagcaggtggaggggagaga
gaggaggccgagcagaaagccctgctggccgtacagtgcagccttctgaagatcctcagc
aaaacgctggcgacgctgcagcacttcacaccagactgctgccagattctcctggaccag
tgtatggacttggcagagtataggaccttgtttgtgctcagcttcacgactcctgcgttc
gaccctgacgtggctccttcgttcggaaccctgctggccaccatcaacgtggccctgagc
atgctgagcgagatggaaaagaagaaagaacctgtttccttgagcatcgcctcgctagca
tcatcagaggagctccaagcactgaagtcactgctgatgttcaccatggagaactgtttc
tacgtgctgatctcgcaggcggttcggtgtctcaaagatccctccatcctccctcgagac
aaacagaggctcaaacaggagctcagctctgaactgagcactcttctctcgagcctgtcc
cgccacttccgcaggggttcaccatcgtctccggccagcggcatcctcccctccacccag
tccaaaccacccacaccgggctccaagggaagccatgaaggtcaggagccgatcatccag
ctcgttcaggccttcgtcagacttgtgcagagatag
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integrated database retrieval system
