Thunnus thynnus (Atlantic bluefin tuna): 137171302
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Entry
137171302 CDS
T11154
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04510
Focal adhesion
tty04512
ECM-receptor interaction
tty04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137171302
04518 Integrin signaling
137171302
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137171302
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tty00536
]
137171302
Glycosaminoglycan binding proteins [BR:
tty00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137171302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_VIN3
Fn3_Dep-1_2nd
DUF7949
FN3_Tor_3rd
EGF
fn3_2
hEGF
Motif
Other DBs
NCBI-GeneID:
137171302
NCBI-ProteinID:
XP_067431337
LinkDB
All DBs
Position
19:7103373..7137268
Genome browser
AA seq
2384 aa
AA seq
DB search
MGTRGLLGCLLLTALLSFSNAGLVKKILRHRRQTLASPKEHNITLPSADHPVVFNHVYNI
NVPASALCSVDLNAPENKQLLPNDAAVSPGYRATEHTLDGENQIVFTHRINIPRRACGCS
DDMPGLKDLMSRLEMLEGELSALRDQCNGDGNCCSAQVTGEVGTKPYCNGHGNYSTETCG
CSCEPGWKGPNCTEPECPNNCQDRGRCVDGKCECFKGFSGEDCTLKVCPVECGEYGQCVD
GICVCSDGYFGEDCSQTKCLNNCHGRGRCEDGDCVCDEPWTGFDCSELICPKDCYDRGSC
VNGTCYCEEGYTGEDCGVRTCPNNCHGNGFCVEGKCVCTAGYSGEDCSQLTCLNDCNDRG
TCSNGICICDMGYQGEDCSQLACLNNCNNRGQCINGQCACDVGFQGDDCSELSCPNNCQD
RGRCVNGQCVCDEGFTGEDCSIRTCPSDCYGRGECIDGRCECHAGFTGEDCSELSCPNRC
SNRGRCIDGQCVCDEGFSGEDCGLKACPNDCMARGFCSDGKCICEEGFTGDDCSGLACPD
NCNNRGRCINGRCTCESGYEGESCADLSCLNNCQDKGRCVNGQCVCDEGYIGDDCSEVSP
PKDLNIGKVTTDTVDLLWDNEMLVTEYLVTYVPTSPGGLLQEFTVPGDKSAATVKELEPG
IEYQINVYAVLSNKKSIPVSARVATALPQPEGLRFKSVSETSVEVVWDQLDISFDGWEIY
FRNTKEDNGKIVSNLPPSQNQFIQSGLGPGQEYEVSINIIKNNTRGPQTSKTVTTNIDGP
RQVEVKDVTDSSALVSWSEPVATIDKVTMVYGSSSDPTDVISADISSPDKQYSIDGLKPD
TEYVVTLISKSKHMSSKAVTTTFTTALDAPKDLQAVSQTDSSITLEWSNSQADVGSYRVK
YSPISGAAHGEEVFPRGPGDTTKATITGLKPGTEYGIGVTAVKKERESLPATTNAATDLD
PPRDLEQVESTETSITLRWQKPRAKVTGYRLVYISKDNQANEVEIPGTVTSHVIRNLTPG
MNYGLSLTAERGHRRSTPVTVSTSTASFTFYLSDSDDRELTTPAGSEDNVISFAYLDTSE
SHFSGTEPDDELGTLTISGATPDGFDLTWELKGHGVYDSFAVEYKDTQRLQDEREVRLPG
NATGSRIQGLNASTEYQLKLYGITGSQRSALLEAVAVTATKPTSPDVLSLSIKDAPTTPQ
SASDIGAVQTPEPLRPLSTEAPSSTDTDVTSSGAEPESSTLDVLGDLTVTNVTASSVSLV
WSAPDEVFDSFLVELSAPSALIQAHVTTVPGSMRKAEIEGLSPSTRYDIIIQGLVEGERS
LPLRGFATTEELKPMVVNLTISDNTWDGFTASWIPMGGEFDSFVIEVTNLENIAESQNLS
LSGDALSLGISGLNPNTSYMVGLYGMYQGSFLEPLYTEAITVNQPLVGKLYVSNLTSESF
SIFWNDTEGEFDGFILEIIDSDWLMEPKEFNLSHNAMSHDVTGLRPSTDYIAYLYGTYKG
SRTSAVSIVASTAKEPDLSRLVVSNITSDRFSLSWRTGENTFDIFIVEVRESALPSQAMG
RALPGDVRSTVMAGLKASTSYNIKLYASVGGQNTQPLFAVATTEDVPQLGPIAASSVSPH
NLSLSWSTVSGHFDGFVVRVSDPEQQSDTLEFRLPGEVRNFTISNLMDATGYDIELYGIS
HGRQTPSVLAHAVTAPLPKVENLTISNITPYGFRVSWEVKQQQQLQQPEELAPSSGGFRH
FHIVVTDSGWLLEPQEFTVAGNESHLDIWGLITGIGYEVRLTGVSESGLLSRPLTTVAVT
EAEPEVEHLFVSDITADSFRLSWTSDEDMFDRFVIKIRDSKRLAHPREYSVRGDERTKVL
TGLMGGTEYEIELYGVTLDRRSQPITGVAQTGLSTPRGLHFSEVTESSAIVHWSLSSSTV
DNYRITYVPFEGGTPMMVTVDGDVLEALLPNMIPGKLYQVTVSAVKGLEESDPSTDTVTT
ALDRPQGLTAVNVTDISALLLWQPSVATVDGYVITYSADTVSSVVEHVSGNTVEFEMGSL
VPGTHYTVGVHAMKEAQKSASAVTEFTTDVDPPRDLTATNIQTDSATLTWKPPQAAVTGY
TLTFSSADGTIREVVLSPTASSYSMVQLTGSTEYSVKLQAIAGTQRSRHITTIFTTIGQL
YRYPKDCAQILLNGETTSGLYTIYVGGEESQPIQVYCDMTTDSGGWMVLLRRQNGKLDFF
RNWKNYTAGFGNMNDEFWLGLSNLHKITASGHYEVRVDMRDGGESAFAQYDKFTIAEPRT
RYKISIGAYSGTAGDSMTYHQGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGK
YGDDSHSKGINWFHWKGHEHSIEFAEMKIRPANFRNFESRKKRS
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaagaggccttctgggctgcctcctcctgactgctttgctcagcttttcaaac
gctgggcttgtgaagaaaatcctacggcatcgacgacagactctggcatcccctaaagaa
cacaacatcaccctgcccagtgcagatcatcctgtggtgttcaaccatgtctataacatc
aatgttcctgccagtgctctatgctcagtggacctaaacgctccagagaacaagcagctc
cttcccaatgacgctgcagtttccccgggctatcgcgccactgagcacaccctcgatgga
gagaaccagattgtcttcacccaccgcatcaacattcctcggcgggcctgcggttgtagc
gatgacatgccgggtctgaaagacctcatgagccggttggagatgcttgagggagaactt
tcagcattgagagatcagtgcaatggtgatggtaactgctgcagtgcacaagtcacaggt
gaggtgggaactaagccttactgcaacggtcatggaaactacagcactgaaacttgtggc
tgcagttgtgagcctggatggaagggacccaactgcaccgagcccgagtgtcccaataac
tgccaggaccgaggccgctgcgtggacggaaagtgtgagtgcttcaagggcttctctgga
gaagactgcaccctcaaggtttgccctgtggaatgcggagagtacggacagtgtgtggac
ggcatttgcgtctgctcggatggttacttcggagaagactgctctcagacaaagtgcctc
aacaactgccacggccgcggccgctgtgaggacggagactgcgtatgcgatgaaccttgg
actggctttgactgctctgaactcatctgtcctaaagactgctacgaccgcgggagctgt
gtgaacggcacctgctactgtgaagagggctacacgggggaggactgtggagtacgcacc
tgtcccaacaactgccacggtaacggtttctgtgttgaaggaaagtgcgtctgcaccgcc
ggctacagcggagaagactgctctcagctcacctgcctcaacgactgtaacgacagaggt
acctgctccaacgggatatgtatctgtgatatgggctaccaaggtgaagactgcagccag
ttagcatgtctgaacaactgtaacaacagaggccagtgcataaatggacagtgcgcatgc
gatgtcggtttccagggagatgattgctctgagctgtcatgtcccaacaactgccaggac
agggggcgctgtgttaatggccagtgcgtgtgcgatgaaggcttcactggggaggactgc
agcatcaggacatgcccctcagactgttacggccgtggggagtgtattgatggacgctgt
gagtgtcacgcaggcttcactggcgaggactgcagcgagctgagctgtcctaacagatgc
agcaatcgtggccgatgcattgatgggcagtgtgtttgtgacgaaggcttctctggtgaa
gactgcggtctgaaagcttgtcccaatgactgcatggcccgaggtttctgttccgatggc
aagtgcatctgtgaggagggcttcacaggagatgactgttccgggctcgcctgtccagat
aactgcaacaacaggggtcgctgcatcaatggaaggtgcacatgtgagagtggatatgaa
ggagaaagctgtgcagatctgagctgcctcaacaactgccaagacaaaggccgctgtgtg
aacggtcagtgcgtctgtgatgagggatacattggagacgactgctcagaagtgtctcct
ccaaaggacctcaatatcggcaaggtcacaaccgacacagtggatctcttgtgggacaac
gagatgctggtgactgagtaccttgtgacttatgtgcccaccagtcccggtggtcttctc
caggagttcactgttcctggagacaaaagtgccgcaactgtcaaagagcttgaacctggc
attgagtaccagatcaacgtctacgccgttctgagcaacaaaaagagcatccctgtcagt
gcgagggtggccacagctcttccacagccagaaggtttaagattcaaatcagtgagtgag
acctcagtagaggtcgtgtgggaccagctggacatctcctttgatggctgggagatctat
ttccgcaacacgaaagaagataatggtaaaatcgtgagcaatcttccaccctcccaaaac
cagttcatccagtcaggtctcggaccaggacaggaatatgaagtttccatcaacatcatc
aagaacaacaccagaggaccccagacatccaaaacagtcactacgaatatcgacggcccc
cgtcaggtggaggtgaaagatgtgacggactcctcggctctggtcagctggtccgagccg
gtggctactatagacaaagtcaccatggtttatgggtccagctccgaccccacagatgta
atcagcgcggatatttcctccccagacaagcagtacagcattgacggtctgaagccggac
actgagtacgtagtgaccctcatctccaagagcaaacacatgagcagcaaagctgtcacc
accacgttcactacagccctggacgcccctaaggacctgcaggctgtttcccagacagac
agcagcatcactcttgagtggagtaacagtcaagctgatgttggcagctaccgagtgaaa
tacagccccatctccggcgccgctcatggtgaggaagtgttcccacgaggaccaggagac
accacaaaagctactatcactgggctaaagccagggacggagtatgggatcggagtgact
gccgtgaagaaagagagagagagcctcccagctacgacaaacgcagcaactgacctcgat
cctcccagagatttggagcaagtcgagtccacagagacctccatcaccctgaggtggcag
aaacctcgagccaaggtcaccggctacaggctggtgtacatctccaaagacaaccaggcc
aacgaggtggagatcccaggcacggtgactagccatgtcatacgcaacctgactcctgga
atgaactacggcctcagcttgaccgcagagaggggtcacaggaggagcacacctgtcact
gtgtctacatccacagcgtctttcacattttatttatctgactcagacgaccgcgagcta
acgactcctgcaggctcagaggacaatgtcattagctttgcgtatttagacacctccgag
tcccatttctctgggacggagcctgacgatgagctgggaacgctgactatctcaggcgcc
acacctgatggatttgacctcacgtgggaactaaagggtcacggtgtctatgatagtttc
gcagtagaatataaagacactcagcgtttgcaggatgagagagaggtccgacttcctgga
aatgccactggctctagaatccagggcctgaacgcatcgacagaatatcagttaaagctt
tatgggataaccggtagccagagatctgctctacttgaagctgttgcagtcacagcaacc
aagcctacctctccagatgtactttcgctgagcatcaaagatgccccaacaaccccacag
tctgcttcggatattggagcagttcaaaccccagaacccctccgtcctctaagcacagag
gctccttcctctactgatactgatgtgacgagctctggggctgagcctgaaagctcaacc
ctggatgtattgggagacctcacagtcacaaatgttaccgccagtagcgtaagcctggtt
tggtcggcgcctgatgaggtgtttgatagctttttggtggagctcagtgctccgtcagct
ttgatacaagctcatgtgaccaccgtaccaggaagtatgaggaaggctgaaatagagggc
ttgtccccctcgacacgctatgatattataatacaagggctggtggaaggagagagatct
ttacctctcagaggttttgctactacagaggagctgaagcccatggtggtgaacctcacc
atctctgacaatacatgggacggcttcactgcgtcctggatccccatgggtggggaattt
gacagctttgtcattgaggtaacaaacttggagaatatcgcagagagccagaacctctct
ctttccggagacgctttgagcctgggcatctccgggctgaatcccaacaccagctacatg
gttggcctgtatgggatgtatcagggctccttccttgagcccctgtacactgaagccatc
acagtgaatcagccattggttggcaaactatatgtctcaaacttaacgtcagagagcttt
tcaatcttctggaacgacactgaaggagagtttgatggttttatcctggagattattgat
tctgattggctgatggagccaaaggaatttaacttatcccacaatgcaatgtcccatgac
gtcacagggctcaggcccagcactgactatatagcctacctctatgggacatacaaggga
tccagaacaagcgctgtcagtattgttgcatcaacagctaaagagcctgatctgtccagg
ctagttgtttctaacattacctcagacagattctctctgtcgtggcggacaggagagaac
acttttgatatctttatagtagaagtcagagagtctgctttgccctcgcaggcaatgggg
cgcgctctgccaggagacgtgcgctccacagtcatggccgggctcaaagcgagcacaagc
tacaacataaagctgtacgccagcgttggtggccagaacacacagccgctatttgctgta
gctacaacagaggatgtcccacagttggggcccatagctgcttcatctgtgagcccacat
aacctcagcttgtcctggagcacagtgtcgggccattttgatggctttgttgtccgggtc
agcgaccctgagcagcagtctgatacgctggagttcagactgccgggtgaagtccgtaac
tttacgatctctaacctgatggatgccacaggctatgatattgaactgtatggtatttct
catgggcgccaaactccctctgtgttagcccacgccgtcacagctcctttgcctaaagtg
gaaaacttgaccatttccaacataaccccctacggcttccgtgtgtcgtgggaggtgaag
caacagcagcaactgcagcagccggaggaattagccccctctagcggtggcttcagacac
tttcacatagtggtgacagactccggctggctgctggagcctcaggagttcactgtggca
ggaaacgaaagtcacctggacatctggggcctcatcaccggcataggctatgaggtcagg
ctgaccggggtgtcagagtcagggcttctctctcggcctctgactacagtggctgtgaca
gaggctgagccggaggtggagcatctttttgtctcggacatcacagctgacagtttccgt
ctgtcgtggacgtctgatgaagacatgtttgacagatttgtgatcaaaataagagacagc
aaaagattagcccatcctcgggagtacagcgtccgcggtgatgagcgaaccaaggtttta
actggactcatgggtggcactgagtatgaaatcgagctttatggtgtcacattggaccga
cgctcccaacctattactggggttgctcagacaggcctgtcaactccaagaggactgcac
ttctctgaagtgactgaatcctcagccatagttcactggtccctgtcgagctctacagtg
gataactaccgcatcacctatgtgccgttcgaaggaggaaccccaatgatggtgactgtg
gatggcgacgtgttagaggctttgctgcccaatatgatccctggcaagttgtatcaggtg
actgtcagcgctgtgaagggtctggaggaaagtgatcccagcacagacactgtaaccaca
gctttggacagacctcagggtctgactgcagttaatgtcaccgacatctctgctctgttg
ctgtggcaaccctctgtagccactgttgatggctacgtgattacttacagtgctgataca
gtgtcctcagtggtggagcatgtttctgggaacacggtggagtttgagatgggctccctg
gttccaggaactcattacacagtcggagtgcatgcgatgaaagaagctcagaagagtgct
tctgctgttactgaattcaccaccgatgtggaccctcctcgtgatctgacagctactaac
attcaaactgacagtgcgactctcacatggaaacctccgcaggctgctgtcactggttac
acgctcaccttctcctctgctgatggtacaatcagggaggtggttctaagcccgacagcc
tcctcttatagcatggttcagctaactggttctacagagtacagcgtcaaactgcaggcc
atcgctggaacccagaggagtcgtcacattaccaccatcttcactaccattggacagctg
tacagataccccaaggactgtgctcagattttactgaacggagagacgacttctggtctg
tacaccatctatgtgggtggagaggagagtcaaccaatccaggtttactgtgacatgaca
acagacagcggaggatggatggttctcctgagacgccagaatggaaagctggatttcttt
aggaactggaagaactacaccgctggcttcggtaacatgaatgatgagttctggctgggt
ctctccaacctccataagatcactgcttctggccattatgaagtgcgagtggacatgagg
gacggcggggaatcagcctttgctcagtatgacaagttcacgattgcagagccaagaaca
cgctataaaatctccataggagcatacagtggaacagcaggtgactccatgacttaccac
cagggtcggccattctccacctatgacaatgataatgatattgctgtcaccaactgcgcc
ttgtcctacaaaggtgccttttggtataaaaactgtcatcgtgtcaacctcatggggaaa
tatggtgacgacagtcacagtaaggggatcaactggttccactggaaaggccacgaacat
tcaatcgaatttgcagagatgaagattagaccggccaacttcagaaatttcgagagcaga
aaaaaacgatcatag
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integrated database retrieval system
