KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137171333
Entry
137171333         CDS       T11154                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03082  ATP-dependent chromatin remodeling
tty03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tty00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    137171333
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    137171333
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tty01009]
    137171333
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tty03021]
    137171333
   03036 Chromosome and associated proteins [BR:tty03036]
    137171333
Protein phosphatases and associated proteins [BR:tty01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     137171333
Transcription machinery [BR:tty03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     137171333
    SWI/SNF complex
     137171333
Chromosome and associated proteins [BR:tty03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    137171333
   PBAF complex
    137171333
   SWI/SNF complex
    137171333
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 137171333
NCBI-ProteinID: XP_067431396
LinkDB
Position
19:complement(28270664..28281404)
AA seq 368 aa
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcaattggctcttagtaaaacgtttggccagaagccagttaaatttcagttagagcaa
gatggggacttttacatggttgggtcggaggttggaaactatctgcgtatgttcagaggc
tctttgtataaaagatatccatctttatggaggaggctggcatcagtggaggagaggaag
aaaattgtagcgtcatcacatgccaccagtgttactctgctgaaggcatcagaatgtgaa
gagatcttcgagggtaatgatgagaaatacaaggcggtgtccatcagcacagagcccccg
gcttacctcagggagcagaaagcaaagaggagcagtcagtgggtccccacgctgcctaac
agctctcaccatctagacgccgtgccatgctccaccaccatcaaccgcaaccgaatgggt
cgtgacaagaagaggaccttcccactgtgctttgatgaccatgaccctgcagtgatccat
gagaatgcagcccaggtagaggcgctggttcccattcgtctagacatggagatagacgga
cagaaactgcgagatgccttcacatggaacatgaacgagaaactgatgaccccagagatg
tttgcagaaattctgtgtgatgacctggacctgaatcctctagccttcgtccccgccatc
gcctctgccattcgtcagcagattgagtcctaccccactgacagcatactagaagagcag
gcagaccagagagtcatcatcaagctgaacatccacgtcggcaacatctctctggtggac
cagtttgagtgggacatgtcagagagggagaactccccggagtcttttgcacttaagctc
tgctctgagctgggtctgggcggagagtttgttaccactatcgcctacagcattcgtggt
cagctcagctggcaccagaggacctacgccttcagtgagaacccgctgcccacagtagag
attgccatccgcaacacaggcgatgcagaccagtggtgccccctgctagagaccctcaca
gatgccgaaatggagaagaagatccgagaccaagataggaacacaaggcgtatgagacga
ctggccaacaccgctccctcctggtag

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