Thunnus thynnus (Atlantic bluefin tuna): 137171778
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Entry
137171778 CDS
T11154
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03020
RNA polymerase
tty04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137171778 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
137171778 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tty03021
]
137171778 (polr3a)
Enzymes [BR:
tty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137171778 (polr3a)
Transcription machinery [BR:
tty03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
137171778 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
137171778
NCBI-ProteinID:
XP_067432002
LinkDB
All DBs
Position
20:complement(11728975..11756333)
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVARKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDMNHTPLAYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKE
EKLQFMDFLKRPNLAYLQKRGLKKKISDKCRKRTICLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDPFVSEFLQSFDTAVEHNKVVEPLLTRAQENLNPLVALNLFKRIPQEDIPLLLM
NPEAGKPADLILTRLLVPPVCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPDVHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTAAYLLTLKDTFFDRAKACQIVASILVGKDEKIRISLPRPAIMKPMALWTGKQI
FSVILKPSKECPVKANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YQKCDEYIEALKTGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFDKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCPDEPALSQNELVLTADAIMKRADFLC
CRDSFLEELTDTGSEKYLEEIKKFIKSVSERIKKTRDKYGINDNGTSEPKVLYQLDRITP
KQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYV
LQSLKEELPKVVVQGIPEVARAVIHIDEQSGKSKYKLLVEGDNLRAVMATHGVNGSRTTS
NNTYEVEKTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
DPSPVKRPLLFDNADFHIPLIT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacagatgtggccagaaaaataagccacatctgcttt
gggatgaaatctgctgagcagatgcgtcagcaggcccacatccaggtggtcagtaagaac
ctgtacagccaggacatgaatcacactccactggcctatggagtgttggaccaccgtatg
ggaaccagtgagaaagacagaccgtgtttgacatgtgggaagaatctcgctgattgttta
ggacattacggctacctggatctggagctgccatgttttcatgtcggctatttcaaagcc
ataataggaatcttgcagatgatttgcaagacatgttcgagcataatgctgacgaaagag
gagaaactgcagttcatggatttcttgaaacgacccaacctggcctatctccagaagcgc
ggattgaagaagaagatctctgataaatgccgcaaaaggacaatctgtctgaattgttca
gcttttaatggaccagtgaaaaagtgtggcctgcttaagattatccatgagaagtataaa
acgactaagaaggtggtggatccttttgtgtcagagttcctgcagtcctttgatactgcc
gtcgagcacaacaaagtggtggagcctctgctgacacgggcgcaggaaaacctgaaccct
ttggtggcgctgaacctcttcaagaggattccccaagaagacattcccctgctgctgatg
aaccctgaagcagggaaacctgcagacctcatcctcacccgcctcctggtgcctcctgtc
tgcatacgaccctctgtggtcagcgacctgaagtcaggcaccaatgaggatgacctcacc
atgaagctcacagagataatcttcctcaacgatgtcatcaaaaagcatcgtatgacaggg
gctaagacccagatgatcatggaggactgggacttcctccagctacagtgtgccctttac
atcaacagcgagctctctggcatccccctcaacatggcacctaagaaatggacaagaggc
tttgtgcagagactcaaggggaagcaaggtcgattcagaggaaacctctcagggaaaaga
gtggacttctcaggcagaactgtcatctctcctgacccaaacttgaggatcgacgaggtt
gctgtccctgtgcacgtagccaaaatcctgacttacccagagagggttaacaaagccaat
ctcgaactaatgaggaaacttgtgcgcaacggtcctgacgttcaccctggtgccaacttt
atccagaatcgtcacacacagatgaaaaggtttttaaaatatggaaaccgtgagaagatt
gctcaggagctgaggtttggtgatgtggtagagaggcacctgatagacggagatattgtc
ctattcaatcgacaaccctctctgcacaaactcagcatcatggcccacattgccagagtc
aaacctcacaggacatttcggttcaacgagtgtgtgtgcaccccctacaacgccgacttt
gacggtgatgaaatgaatctccatttacctcagactgaagaagccaaagctgaagccctg
gtcctgatgggtacaaaagctaaccttgtcactccaagaaatggcgagcctctgattgct
gctattcaggactttctgacagcggcctacctcttgaccctgaaggacaccttctttgac
agagcaaaggcctgtcagatagtggcgtcaatccttgtgggcaaagatgaaaaaatcagg
atctctctcccccgcccagctataatgaagcccatggctctgtggacgggcaaacagata
ttcagcgtcattctgaagccaagtaaggaatgtccagtcaaggcaaacctgcggaccaag
ggcaaacagtactgtggcaagggagaggatctctgtcacaatgactcattcgtggtgatt
cacaacagtgagctgatgtgtggaagcatggacaagggcaccttgggatctgggtccaag
aacaacatcttctacatcttgctgagagactggggacagctggaggctgccaacgccatg
tcccgccttgcaagactcgctccggtgtatctttccaatcggggcttttccattggcatt
ggagacgtgacacctggccaaggtctgctgaaggccaaacaggacctgctggatgacggt
taccagaagtgtgatgaatacattgaagctctgaagactggcaaactgcagcagcagccc
ggctgcacggcagaggagaccctggaggctctcatcttgagagaattgtcagtcatcaga
gaccgagctggcagtgcctgcctcagggagctcgacaagagcaacagcccactgatcatg
gctctttgtggctccaaaggatccttcattaatatctctcagatgattgcctgtgtgggc
cagcaggccataagtggctctcgagtacccgatggttttgaaaatcgctccttgcctcac
tttgacaagcactcaaaactgcctgctgctaaaggctttgtggccgacagcttctattct
ggcctgacgcccacagagttcttctttcacaccatggctggtcgggagggtctggtggac
actgctgtgaaaaccgcagagactggatacatgcagaggcgtctggtaaagtccctggag
gatttgtgctcccagtacgacctgacagtgcgaagctccactggcgacatcattcagttc
atttatggcggtgatggtctggaccctgctgcgatggagggaaaggatgagccgctggag
tttaagagagtcctagacaacatccgggcggtctacacgtgtccagacgagcctgcactc
agtcaaaacgagctggtcctcactgcagatgccatcatgaagagagctgacttcttgtgt
tgcagagacagcttcttggaggagttaactgatacaggctcagagaagtacctggaggag
ataaagaaatttattaagagcgtctcagaaagaatcaagaagaccagagacaagtatggt
atcaacgacaacggtaccagcgagccaaaagttctctatcagctggatcgcataaccccc
aaacagctggagaagttccttgaaacctgcagagacaaatacatgagagctcagatggag
ccgggctctgcggtaggggctctgtgtgcccagagtatcggagagcctggtactcagatg
accctgaaaactttccactttgccggcgtggcgtccatgaacatcactctcggtgtgcct
cgcattaaagagatcatcaatgcctccaagaacatcagcactcctataatcactgctcat
ttggatgtggaggatgacgctgactttgccaggctggtgaaggggaggatcgagaaaact
ctcctgggagagatttccgagtacatagaagaggtttttctaccagatgactgttttatc
ctggtgaaattgtcactggaaaggataaggctgctgcgactggaggtaaacgcagaaacg
gtgcgttactccatctgcatgtctaaactgcgagtgaaaccgggagacatcgccgtgcac
ggtgaggctgtggtgtgtgtgtctccgcgagagaacaacaaaagctccatgtactacgtt
ctgcagtcgttaaaagaagagcttcctaaggtggtggttcaaggaatacctgaggttgcc
agagctgtcattcacattgacgaacagagtggcaagagcaagtacaaactcctggtggag
ggggacaacctgagagctgtcatggcaacgcatggagtgaatggaagcaggaccacttcc
aacaatacttacgaggttgagaagaccttgggtattgaggctgctagatcgaccatcatc
aatgagattcaatatacaatggtgaaccatggaatgagcattgaccggcggcatgtcatg
cttctagcagatcttatgtcctataagggggagatacttggaatcaccagatttggttta
gccaaaatgaaggagagcgtcctcatgctggcctccttcgagaaaacagctgaccatctc
ttcgatgccgcgtactttggacagaaggactcagtctgtggtgtgtctgagtgcatcatt
atggggattccaatgaatatcggaacaggactgtttaaactcctacacaaggctgataag
gatccctctccagtcaaaaggcctctcctctttgataacgcagacttccatatacctctg
atcacatag
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integrated database retrieval system
