Thunnus thynnus (Atlantic bluefin tuna): 137171808
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Entry
137171808 CDS
T11154
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tty01002
]
137171808 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tty04121
]
137171808 (usp42)
Enzymes [BR:
tty01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
137171808 (usp42)
Peptidases and inhibitors [BR:
tty01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
137171808 (usp42)
Ubiquitin system [BR:
tty04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
137171808 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
137171808
NCBI-ProteinID:
XP_067432040
LinkDB
All DBs
Position
20:complement(18612029..18624161)
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AA seq
1233 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCKRSPFTSGDVGMDGSCSSSWAVGPTLPSDSPRLKAPGGCLGP
TPGAAVYNSTSSVDRPKEQVISGGDGIDLPQKVLFPPERLNLKWIQVHRIGAGLQNMGNT
CFLNSALQCLTYTPPFANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIGV
LNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLRS
RVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVTA
SKRFTIHRSANVLTLSLKRFANFSGGKITKDVKYPEYLDLRAFMSQSQGEPQVYGLYAVL
VHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSSDVKKTGD
YSHMSHNPAIPGQSSPRPVVIPRINTTVHHNIGFIGPQLPPHMTKSALHVNGNGPLRDYP
TSSKPSTSSSVVGKPSHGLGSSSSISHSISRPTVIPDHDKRQKLSFFIGQGKQNRPSSSS
SYSQPSSASSSSSSCSSSSSSSSSSSLSSSSQSTSDVRFVPRQLNHVNGSTSCSNGDHHP
GGNGASFLVPYGQESSEESDQENCGTLDNGCLAKSHLNGNNRTGDVFDKGPQATNGESGV
HHNGNGLNGPTNGVSKSNQNGHHYGHHKVNGHNTPDKISGSNHGSLSSLATVAVNGLDSD
HTQASNVVHTCATAQASSSQSIQPAASESQHLSTPDTRAKTVSDPPPQHTAPSAVSSPPT
ATATNAHSVASRESASSSAHHGNPAALSNPPDTTRVCAAPQKVSISGDEAKDVLQTKSPS
AGTDGRTDAKEQHQSNPSSRGSERQSSRERERDRHYSSDWSRDRDRHYRDRSQERDSDGD
RHRYRREYRDHHHHRSYRDRLPPHDRSYKDWEAERRWEPERRWEPERRWERTVHHPRERD
RDRCSHHYHHYHHHRYREDWNRERRGHGYNYREESHSRSRWHQDSRDSRMMKDKSNGRER
DYYSSKEETSSPTTMPETSTKSKGSPLRAPLSTSASASNREDQNHKRTSVPLSKDRDDSS
EARHAKKHKKSKKKKKSKDKDRHRESGSSDADSDRATETKKKKKKKKRQRDSAAEQHSPG
ATQSHKARSSEERESRKRRYYDVKNAKHDNVCSPEKRRRTDYTDDHLIPSQHTSPTANGS
AHRHLNGFTGNGYSRTNGNSHGISSGLSSTMKH
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaggtcttcagaaaagtctgaccacgagtcagtcgggtgtaagcga
tcccccttcaccagtggagacgtggggatggatggcagctgttccagcagctgggcagtg
ggccccaccctgcccagtgactctccgcgtctgaaggctccaggaggctgcctgggccca
acgcctggagctgctgtctacaacagtacatcctctgtggaccggcccaaagagcaagtg
ataagcggtggtgacggcattgacttgccccagaaggtcctcttcccacccgagcggctc
aacctaaagtggatccaggttcatcgcatcggtgcaggcctgcagaacatggggaacacc
tgcttccttaactcagccctgcagtgtctcacctatacccctccgtttgccaactacatg
ttgacacgggagcactccaaaacatgtcacgagccggggttctgtatgatgtgcaccatg
caaaaccacatcattcaggttttcgccaactctgggaatgtcattaagcccatcggtgtg
ctcaatgaactcaaaaggatcgcaaagcacttccgctatggaagccaggaagatgcccat
gagttcctgcggtacacagtggatgctatgcaaaagtcctgcttacctggaaccaaattg
gacaggcaaacgcaggcaaccactttcatccatcaagtatttggcgggtacctaagatcc
agagttaaatgtttaaactgcaaagcagtctctgatacatttgacccttttctggatatt
actctggaaatcaagacggctcccagtgtctccaaggctctggagcagtttgtcaagcca
gaacagctggatggagaaaacgcctacaaatgcaccaagtgcaaaaaaatggtgacagcc
tcaaagagatttaccatccaccgcagcgccaacgtgctcaccctctcactcaaacgcttc
gcaaacttcagtggaggcaaaatcacaaaggatgtgaaatacccagagtatctggacctg
cgggccttcatgtctcagtcccaaggagagccccaggtttacgggctgtacgctgtgctg
gttcactctggattcagctgtcatgctggacactatttctgctatattaaggcaagcaat
ggtcagtggtatcagatgaacgactcctctgtatcggtcagtgacatcaggtctgttctc
aaccagcaggcctatgtccttttctacatcaagtccagcgatgtgaaaaagacaggggac
tacagccacatgagccataacccagccatccctggtcagtcgtctccacggccggtggtg
ataccacgcatcaacaccactgtccaccacaacattggcttcatagggccccagctgccc
ccacacatgaccaagagcgctcttcatgttaatgggaacggacctcttagggactatccc
accagttccaagcccagcaccagcagcagtgttgtgggtaaaccaagtcacggactgggc
tcctcctcttccatctcccactcaatcagccggcccacagtgatcccagaccacgacaaa
cgccagaagctttcattcttcatcggacaaggcaaacagaaccgcccgtcctcttcgtcc
tcttacagccagccgtcctctgccagcagctcctcctccagctgctcctcctcctcttcc
tcctcctcctccagctctttatcctcctcctcacagtctacctcagacgttcgctttgtt
ccgcgtcagcttaaccacgttaacggcagcacgtcttgcagtaacggggatcaccaccct
ggagggaacggagcatccttcttggtgccatacggccaagagtcttcagaggagtcggac
caggagaactgtggcactctggataacggctgtttagccaagtctcacctcaacggaaac
aaccgaacaggtgatgtgtttgataaaggccctcaagccaccaatggggagtcaggagtg
caccataatggaaacggattaaatggaccaaccaatggcgtctctaaatccaaccaaaac
gggcaccattatggacaccacaaagtcaatggacacaatacgcctgataagatctctggc
agtaatcatggcagtttgtcctctctggctactgttgctgttaatggactagacagtgat
catactcaagcaagcaatgtggtacatacttgtgccacagcccaggccagctcttctcag
agcatccagcctgctgccagtgaaagccagcacctctccactcctgacacaagggctaaa
actgtgtccgatcccccgcctcagcatacagcaccctctgctgttagctctccacctaca
gccaccgctaccaacgcccattctgtcgcatctagagaatccgcttcctcttctgcacat
catggcaaccctgcggccttatccaacccgccagacaccaccagggtctgtgcagctcca
cagaaggttagcatcagcggggatgaagccaaggatgtactacagaccaagagtccatca
gcagggactgatggacgtacagatgctaaagaacagcaccagtctaatcccagttctaga
ggcagtgaaagacaatcttcccgagaaagggagagagacagacattactcctctgactgg
agcagagaccgagacagacactacagggacaggagtcaggagcgagacagtgatggcgat
cgtcatcggtacagacgggagtaccgagaccaccaccaccatcgttcatacagggatcgt
ttgcctcctcacgaccgttcctacaaggactgggaggctgagcgccgctgggagcctgag
cgccgctgggagcccgagcgccgctgggagcggaccgttcaccaccccagggagcgagat
cgtgacaggtgctctcaccattaccaccactaccaccaccaccgatacagagaagactgg
aaccgtgagcggagggggcatggttataactaccgcgaggagtctcacagtcgctcaagg
tggcatcaggacagtcgagactctcgaatgatgaaggacaagagcaacggcagggagagg
gactattactcttcaaaagaggagacttcctcgcccaccacaatgccagaaacatccacc
aagtccaagggctcgcccctgcgggctcctctctccacgtctgcatctgcttcaaacaga
gaggatcaaaatcacaagaggacctctgttcctctgagcaaagacagggacgacagctct
gaggcccgacatgctaaaaaacacaaaaagagcaagaaaaagaagaagtcgaaggataaa
gacagacaccgtgagagcggaagctctgacgcagattcggacagagccactgaaacaaaa
aagaagaagaagaaaaagaagaggcagcgggacagcgcggccgagcagcacagcccaggc
gcaactcagagccacaaggccagaagcagcgaggaaagggagagccgcaagcgacgatac
tatgacgtcaagaacgctaaacacgacaacgtttgttcaccagaaaaacgccggcgcaca
gactacactgacgatcacctaatcccctcccagcacacctcacccacggcaaacggttca
gctcaccgccacctcaacggtttcacaggaaacggttacagccgaaccaatggcaactcc
cacggaatctccagtggcctgagcagtaccatgaaacactga
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integrated database retrieval system
