Thunnus thynnus (Atlantic bluefin tuna): 137171810
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Entry
137171810 CDS
T11154
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03430
Mismatch repair
tty03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137171810 (pms2)
03460 Fanconi anemia pathway
137171810 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tty03400
]
137171810 (pms2)
DNA repair and recombination proteins [BR:
tty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
137171810 (pms2)
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Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
137171810
NCBI-ProteinID:
XP_067432048
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Position
20:18636590..18642766
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AA seq
871 aa
AA seq
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MSDACSSEPAGAIRAIDKHSVHQICSGQVVLTLATAVKELVENSVDAGATNIDVKLKEHG
AELVEVSDNGKGVEEANFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSV
VTCHESSQVGTKLVFDHKGHLVQRSPHPRQQGTTVSLQQLFCTLPVRHKEFQRNIKKEFT
KMVHVLQSYCIVSTGVRITCSNQTGQGKRSTVLSTSGSQSMRDNIGAIFGAKQLQSLLPF
QQVSPTENVIEEYGLKDEELPKQLFSITGFVSRGDHGVGRSATDRQFFFINNRPCDPLKV
TKLVNEVYHMYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKLLLAILKTSLISM
FESGVNKISLSNMSIPSTNTRSASELCQVVPSNENMPEPGEDTEAVIQSPKSSLNLAGLK
AAFSSHHSSNSGIRSNMSKPAKSGPAQKTLQSFFKGPEKPPTCNPRVKSPLKPTRDLTSC
SPVGKSLLDGFRYGRVPCSDTDSEKNVALISCDSITAPDSQCPGPEFSSPELVIDSVKNE
TFEDTSDKSHTVPEDPELQDEPCTSTEDYPVSPDAKRARKDSPHFPTESKSTTVSHCSEG
SSSSSSSSSSVVVDAPVCLQRRTVPLQFSLQELTGKMRRLQDGQKQRANEELRYRRFRAK
INPGENQSAEEELKKEISKDMFKEMEIIGQFNLGFIITKLNSDVFMIDQHATDEKYNFEM
LQQHTVLQGQKLIVPQKLQLTVVSENVLIENIEIFRKNGFEFLVDEDAQVMERVKLVSMP
TSKNWTFGPADIEELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSTSEMKKLV
VHMGEIEQPWNCPHGRPTMRHLANLDVISQD
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcttgcagctccgaacctgccggagccatcagggccattgacaagcattca
gtgcatcaaatctgctcaggacaggtggtgctgactttggccactgctgttaaagagctg
gtggagaatagcgtggatgcaggagccaccaacattgatgtcaagctgaaggagcatgga
gcagaactagtggaagtgtcagacaatggcaaaggagtcgaagaggccaactttgaagga
ttgacgttgaagcatcacacatcaaagctgagggatttttcagatctcattcacgtggaa
acatttggtttcagaggtgaagctctcagctctttatgtgctctgagtgacctgagtgtg
gtgacgtgccatgagtccagccaggtgggcaccaagctggtgtttgaccacaaaggtcac
ctggttcagcggtcacctcatccccggcagcaaggtaccacagtcagcctgcagcagctc
ttctgcaccctgcctgttcgacacaaggagtttcagcgcaatataaaaaaggagtttacc
aaaatggtacatgtcctgcagtcctactgcatcgtctccacaggagtgcgtattacctgc
tctaaccaaactgggcagggaaagcgcagcacagttcttagcaccagcggcagccagagt
atgagagacaacataggagctatatttggagcaaaacagctacaaagtcttctgcctttt
cagcaagtgtcccctacagaaaatgttatagaagaatacggactcaaggatgaagaacta
cccaaacagcttttttccatcacagggtttgtgtctcgaggagaccatggtgtcgggaga
agcgccacagacagacagttctttttcataaacaaccgaccatgtgatccccttaaagtg
accaaacttgtgaatgaagtgtatcatatgtataacagacatcagtatccgtttgttgcc
ttgaacatagctgttgcctcagagtgtgtggatgtaaacgtgactccagacaagcggcaa
attttccttcaggaggagaaactcttgttggctattctaaagacctctctcatcagcatg
tttgagtctggagtcaataaaatcagcctgagcaacatgtctatacccagcaccaataca
aggtctgcatctgagctgtgtcaggttgtcccgtctaatgagaacatgccagaacccgga
gaggacacggaggcagtgattcagagcccgaagtcgtccctaaacctggctggcctaaaa
gctgctttttcaagccatcacagctcaaattctggtatcaggtctaacatgtcaaaacct
gcaaagagtggccctgctcagaagacacttcagtccttttttaagggtcctgaaaaacct
cctacctgcaacccacgtgtaaaatctcctttaaaacccacgagagatttaacttcatgc
tcaccagtgggaaagtctttgctagatgggttcaggtatggcagggtgccatgcagcgat
acagactctgagaaaaacgttgctctgatcagttgtgactccattacagcaccagatagt
caatgtcctggtccagagttcagctctcctgaactggtgattgacagtgtaaaaaacgaa
acattcgaagacacatcagataaaagtcacacagttcctgaagacccagaattgcaagat
gaaccatgcacttccactgaggactaccctgtgagcccagatgccaagagagctaggaaa
gacagtccgcatttccccacagagagcaaatccaccactgtttcacactgttcagaggga
tcctcctcctcttcctcctcctcctcctccgtggtggtggatgctccagtctgcttacag
aggaggacggtgcctctccagttctctctacaagagcttacagggaagatgaggaggttg
caagacgggcagaaacaaagggccaatgaggagctgcgctaccgacgtttcagggccaag
atcaaccctggagaaaaccagagtgcagaggaagagcttaagaaggagatcagtaaagac
atgttcaaagagatggagatcatcggtcagtttaacttgggcttcattatcaccaaattg
aactcggacgtcttcatgattgaccagcatgccacagatgagaaatacaactttgagatg
ctgcagcaacacacagtgctccaaggacagaaactcatcgtccctcagaaactccagctc
actgtggtcagtgagaacgtactaatagagaacatcgagattttcagaaagaatggcttt
gaatttctggttgatgaggatgctcaggtgatggaaagggtaaagctggtgtctatgccc
accagtaagaactggacatttggtcctgctgacatcgaggagctgatcttcatgttgagt
gacagcccgggagtcatgtgccgaccatcccgcgtcaggcaaatgttcgcctccagagct
tgtcggaaatctgtgatgattggcactgctctgagcaccagcgagatgaagaagctcgtg
gttcacatgggggagatcgagcagccgtggaactgtcctcacggcaggcccaccatgaga
cacctggccaacctggacgtcatctcacaagactga
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