Thunnus thynnus (Atlantic bluefin tuna): 137172141
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Entry
137172141 CDS
T11154
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tty03016
]
137172141 (trub1)
Enzymes [BR:
tty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
137172141 (trub1)
Transfer RNA biogenesis [BR:
tty03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
137172141 (trub1)
Prokaryotic type
137172141 (trub1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
137172141
NCBI-ProteinID:
XP_067432519
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All DBs
Position
20:complement(26708364..26715337)
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AA seq
278 aa
AA seq
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MAGNISNTTAPITSSLSKLQSLNGLFAIYKKQGPTSADVLNTLKEALLKEAGVQNPNPRK
RRKQSLKMGHGGTLDSAASGVLVVGVGNGTKMLSTMLAGSKKYVAVGELGKATDTLDATG
SVTLEKDFEHITRLDIEEKLKNFVGDIMQVPPLYSALKKDGQRLSVLLKKGHKVEAKPAR
AVTVYNLTLQEFKPPVFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELTRTKQGQFTLE
EHALHEEHWTLEHILTSLQPCSGSEAGQDCTKPPEADT
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaacataagcaacaccactgcaccgataactagttctctgtctaaattacag
tctctgaacggactgttcgcaatttataaaaaacaaggaccgacatctgcagacgtcctg
aatacactgaaagaagctttactcaaggaggctggtgtgcagaacccaaacccgcgaaag
aggaggaagcagagtctgaagatggggcacggagggacgctggacagcgctgccagcggg
gtgttggttgttggtgttgggaatggtacaaaaatgctcagtaccatgttggctggttct
aagaaatatgttgctgtgggggaactgggaaaagcaacagatactctggatgccactggc
agtgtgactctggaaaaagactttgaacacatcaccaggttggacatcgaggagaagctg
aaaaactttgttggtgatattatgcaagtccctccactttactctgcactgaaaaaagac
ggccagcgtctgtctgtcctgctgaagaaaggtcacaaggtcgaggctaaacctgccaga
gcggtgacggtgtacaacctgaccctgcaagagttcaaacctcctgtcttcactctggat
attgaatgcggtggaggattttatgtcagaagcttggttgatgatctgggaaaagctctg
tcatcatgtgctcatgtcaaagagctgacccgtaccaagcagggtcagttcaccctggag
gagcacgccttacatgaggagcactggacactggaacatatcctcacatctctgcagccc
tgctcaggatcagaggcgggtcaggactgtaccaaaccaccagaggcggacacctga
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