Thunnus thynnus (Atlantic bluefin tuna): 137172251
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Entry
137172251 CDS
T11154
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137172251 (vps35l)
Membrane trafficking [BR:
tty04131
]
Protein recycling
Others
Retriever complex
137172251 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
137172251
NCBI-ProteinID:
XP_067432667
LinkDB
All DBs
Position
20:complement(20399687..20410573)
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AA seq
969 aa
AA seq
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MAAVQWRTRWRNYEAELQRCRPEAAPVEFGDYHPLKPIMVTDTKTRRGARKGSTSSSSSS
SSSAAPDPLSSMLDGTDPLSMFAAASASETPATSHSTSAGDLGRKRREKEVEEAVGPDFE
PWSVKRGEILARFTTTEKLSINLFMGSDKGKAPSPGSSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYANRIEELNQSLKEAWSSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLI
TDILDTFGRLVYDRIWTMCSDPRPLPDSFTVDDVNDTAKETCLNWFFKIASIRELLPRLY
VEAAILKCNRFLNKSGIQETLPRLTAMIRGIGDPLVAAYTRAYLCRVGMEVAPNLKDSLN
RNFFDLLGTFRQISGESVQKQLILQRVEVPEYLTLYSPAINWILQCIAYRAPEPLLTEMM
ERCKKLGNNALLLNSVMRAFRPDFVAARATDFIGMIKDCDEAGFPKHLLFGSLGRSLACA
DPPESERLTILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTP
DRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFLDMFQKDSVRVEVCRSIMEVFIK
HQLEPTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLSLLIIGFIRMVCFGRDFEQQLS
FCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFITIPSL
SSIFSRLSLYLQSGQVALANQCLSQADAFLKAAVSLLPEVPRSISVEGKLRSSESFLLDF
INNFLATLLVVPDHPEHGVLYLVRGLLNIVQDYTWEDNSDAKVRVYVSALPLLAAMSQET
YLYSIPKVDSNETLYGGDPKFLSEINKLCETLIGQVLDQLKALGRDEQSTRRQGALAFSL
FGVLLAHGDLRNNKLSQLAVNLWNLSHKHGYCDTRVSVRTLEYIKHQALQHDMAHLSDTV
QRLSLQSRT
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtgcagtggcgtacccgctggcgcaactatgaagcagagctgcaaaggtgt
cgtcctgaggcggctcctgttgaatttggagactaccatcccctcaaaccaatcatggtg
acagacaccaagactcgccgtggggctcgtaaaggcagcacctcctcctcctcctcctcc
tcttcctctgcagccccggaccccctcagctccatgctggacgggaccgaccccctgtcc
atgtttgctgcggcctcggccagcgagactccagccacgtcacacagcacctccgcaggg
gacctggggaggaagaggcgggagaaagaggtagaggaggcagtgggaccagactttgag
ccttggtcggtgaagaggggagagatcctggccagattcactaccaccgaaaaactctca
attaatctattcatgggctctgataaaggaaaagctcctagtcccggatcctcagctgtg
tcagagaaggtccgcactcgcctggaggagctggatgatctggaggagggttcccagaga
gagctgttgaacctctcccagcaggattatgccaaccgcatcgaggagctgaaccagtcc
ctgaaggaggcctggtcctccgaccagaaggtcaaagccctgaagatcgtcatccagtgc
tctaagcttctgtccgacacctctgtgatccagttctaccccagcaagtttgttctcatc
actgatatcctcgacactttcggccggcttgtgtacgacagaatctggaccatgtgttca
gacccacgacctttgccagactcgttcacagttgacgacgtgaacgacacagccaaggag
acgtgcctcaactggttcttcaagatcgcctccatcagagagctcctgcccagactatac
gtagaggctgccatcctcaagtgcaaccgcttcctgaacaaatctggcattcaggagact
cttcctcggttgacggccatgatcagagggatcggagaccctttggtggctgcgtacacc
agagcttacctctgcagggtgggcatggaagtggcccccaacctgaaagacagcctgaac
cgcaacttcttcgacctgctcggcaccttccggcagatcagcggagagagcgtccagaaa
cagctgatcctgcagagggtggaggtgccagagtacctgacgctttactcacctgccatc
aactggatcctgcagtgtatcgcctacagagctccggagcctctgctaacagagatgatg
gagagatgcaagaagctgggaaacaatgccttgctgctgaattcagtaatgagggcattc
agacccgattttgtcgcagccagagccacggacttcatcggtatgataaaagactgcgac
gaggccggcttcccaaagcatctgttgtttgggtctctgggtcgcagtctggcttgtgct
gaccctccagaatctgagaggctgacgatcctcaatgaagcctggaaggtcatcaccaaa
gtccgcagtcctcaggattacatcaactgcgctgagatctgggtggagttcacctgccga
cactttacaaaacgtgaggtcaacaccgtcctggctgacatcatcaaacacatgacccct
gaccgggcgttcgaggacgcctatcctcagctgcagtcagtgatcaggaagatcctcacc
tacttccacgacttctccgtcctcttctccatggagcgtttcctgccttttctagacatg
ttccagaaggacagtgttagggtggaggtctgcagatccatcatggaggtcttcatcaaa
caccaactagagcccaccagagacccggtcatcctcaacgccatgctgcatatctgcaag
accatgcacgactcggtcaacgctctcactctggaggatgaaaaaagatctttgtctctg
ctgatcatcggcttcatccgcatggtttgttttggtcgtgacttcgagcagcagctgagt
ttctgtgtggaggccagagctactttctgtaacctggagccagtgctggtgcagctcatt
catacggtgaaccagctggcgatggagaccaggagggtgatgagagggagtcactctcga
aaaacggcggcattcgtcagggcgtgcgctgcctacagtttcatcaccatcccgtctctc
agcagcatcttcagtcgtctcagcctctatctgcagtctggccaggttgcgttggccaac
cagtgtctctcccaggcggatgccttcctaaaggcagcggtcagtcttcttccggaggtt
cctcgctccataagcgtggaggggaaacttcgctcctcagagagtttcctactggacttc
attaacaacttcctggccacactgctggttgtcccggaccacccagagcacggcgtgctc
tacctagtccgcggtctgctcaatatagtccaggattacacctgggaggacaacagcgac
gctaaggtgcgggtctacgtcagcgccctgcccctgctggccgccatgagtcaagaaacc
tacctctactccatccccaaagtggattccaatgagacgctttacggaggagaccccaag
tttctatcggagatcaacaagctgtgtgagaccctgatcggacaggtcctggatcaactg
aaggccctcggtcgggacgagcagagcacacgccgtcagggcgctctggccttctccctg
tttggtgtcctgctggctcacggtgacctgaggaacaacaagctgagccagctggccgtc
aacctgtggaacctcagccacaaacacggatattgcgacacacgtgtctctgttcggact
ttggagtacatcaagcaccaggctctgcagcacgacatggctcacctgtcagatacagtc
cagaggctctcactgcagtcccgcacctga
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