Thunnus thynnus (Atlantic bluefin tuna): 137172271
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Entry
137172271 CDS
T11154
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tty04121
]
137172271 (rnf40)
Enzymes [BR:
tty01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137172271 (rnf40)
Ubiquitin system [BR:
tty04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
137172271 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
OVT1
zf-rbx1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
137172271
NCBI-ProteinID:
XP_067432695
LinkDB
All DBs
Position
20:17454556..17468627
Genome browser
AA seq
1003 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEEDVHVLRKRIEPETPV
ASAPVPPSAPLPDPTPMEEDGVSLASPASAVPPPPLPETQNEGEQPEQQQQEERQEECQE
QQQPPPPDGSEELLTPTEPPQNSTTDASPPPPPLSENAKGFLATLEHSSEEELTLHLQDR
MQFSKEAISCLVCVFDRLHSRIDDMSKQVQAAACEDESQSEIINVNHTLMEENSRLRDLA
TLLQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAEAM
EQLKSGYSSTGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQLELQEAV
RESEKLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHL
RQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMR
HLISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGVLILEETTSDSIDVKKEE
DEDQEEEEERRKELERQRAREREREREAERERERERERERQRSDELKRKDSDTLKMLRVE
LKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKES
KKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQ
LREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGVL
QSTLAALEKELAVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTAR
ERESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKET
VLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctgggggaggaaaacgtccctcaggaggggacagcccccctggcccccct
gagaagaagagcaaaaaagaggagaagaccaccaccactctcattgagcccatacgcatc
gctggagtctcttctacagaggaaatggacatgaaggtgctccagttcaagaataagaag
ctgtgtgagcgcttggagcagagacagacgatggaggatgagttacgagagaaaattgaa
aagctggagaagaggcaagccactgatgacaccaccctgctgattgtcaatcgctactgg
tcgcagttggaagaggatgtgcatgttctacgcaaacgtattgagccagaaactccggtg
gcatccgcccctgtcccgccgtctgctcctctccctgaccctacaccaatggaggaagat
ggtgtcagtctggcctcaccagcctctgctgtgcctccacctccactcccagagacacag
aatgagggggagcagccagagcagcagcagcaggaggagcgtcaggaagagtgtcaagag
cagcagcagccgcctcctcctgatgggtcagaagagttgttgacgcccacagagccgcca
cagaactcaacaacagatgcatcgccgccccctcctcctctaagtgagaatgccaagggt
ttcctggccacactggagcacagcagcgaggaggagctcaccctgcacctacaggaccgc
atgcagttcagtaaggaagccatctcctgtctggtctgtgtcttcgacaggctgcacagc
cgcatcgatgacatgtccaagcaggtccaggctgcagcatgtgaggatgagagccagtct
gagatcatcaatgtgaaccacactctgatggaggagaacagtcgactgcgagacctggcc
actctcctgcagggtcgacaccacaagatgtccatggagtacaatgagttggtggacaag
gtgaccagctctgagaccaaggtgtctgagatggagacgacagtggaggacctgcagtgg
gacattgagaaactccgcaacagggaacaaaagctcaacaaacatctagcagaggccatg
gagcagcttaagtctggatacagcagcactggcagctcaggtgggcttcctggaggccag
attacattgaacattcaaaagtttgagagtcttaatgcagagttggagcacaaccaggag
ttagctaatagccgcatggccgagttggagaaactgcagctggagctccaggaggctgtg
agggagagcgagaaactcaagatggacttgcggaatattccagaggaggttgtgaaggag
accctggagtacaaatgtctgcaatctcaattctccctgctgtacaacgagtcactcggg
gtgaaaacccagctggatgaggcacgggctctcctgctcactgccaagaatgcccacctc
cgacagattgagcacatggagagtgatgagctttcccttcagaagaagctgaggactgag
gtcatccagctggaggacaccctggcccaggtgcgcaaagaatatgagatgctgcgcatc
gagtttgagcaaaacctggcagccaacgagcaagcaggaccaatcaacagagagatgcga
catttaatcagcagccttcagaaccacaacttgcagctgaaaggtgatgtgcagcgctat
aaaaggaagttgcgggaaacacagatggagatcaacaagttacgttgccagagtggcgac
acaggggtactgattctagaggagacaacgagtgacagcatcgacgtgaagaaagaggag
gatgaggaccaggaggaggaagaagagaggaggaaggaactggagagacagcgggccaga
gagagagagagggagagggaagctgagcgagaacgagagcgtgagcgtgagagagagagg
cagcgcagcgacgagctgaagaggaaggactcagacacactgaagatgctcagagtagaa
ctcaagaaagcccaggagtcccagaaagagatgaagctcctattggacatgtacaagtcg
gctccaaaggagcagagggacaaagtgcagctaatggcagctgaacgcaaatctaaagct
gaggtggatgagttgaggatgcgagtgcgagagctggaggagagggagaggaaggagagc
aagaagctggctgatgaagatgccctcaggaagatccgagtggcagaagagaccattgag
catctacagaagaaactcgctgccactaaacaggaggaggaagccctgctgagcgagatg
gacgtaacagggcaggcttttgaggacatgcaggaacagaacagccgactattgcagcaa
ttacgagagaaggacgatgccaatttcaagctgatgagtgagagaattaaatctaaccag
atctacaagctgctgaaagaagagaaggaggaattggcggaccaagttctcacattcaaa
acccaggtggatgcccagctgctggttgtacagaagcttgaagaaaaagagggtgttctc
cagagcacgctggccgctctggaaaaagagctggccgtccggacacaagcactcgaactc
aacaagaggaaggcggtggaggctgcccagctggcagaggacctgaaggtgcagcttgaa
cacacgcaggccaagcttaaagagatccaggtctctgtggctgagaaccgcacagcccgg
gaaagggaaagcagcaaccttaaacgagcacaggaggatctgtccaggctgaggcggaag
ctggagaaacagaagaaggtggaggtttactctgatgctgacgagatcctgcaggaggaa
atcaaccagtacaaggccaagctgcgctgcccctgctgcaacacccgagacaaggagacc
gtgctcaccaagtgtttccacgttttctgctacgaatgtctgaagatgcgttacgacacc
cgacagaggaagtgccccaagtgcaactgtgccttcggagccaacgactttcaccgcatc
tacatcacctaa
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integrated database retrieval system
