Thunnus thynnus (Atlantic bluefin tuna): 137172611
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Entry
137172611 CDS
T11154
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137172611 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tty03400
]
137172611 (msh2)
DNA repair and recombination proteins [BR:
tty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137172611 (msh2)
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NCBI-GeneID:
137172611
NCBI-ProteinID:
XP_067433222
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Position
20:9995632..10007275
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AA seq
935 aa
AA seq
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MAVQPKQNLSMDSVAEHGFLNFFFSMPEKPDSTFRIFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKNLGSGSRKLESVVLSKLNFEAFVKDLLLVRQYRVEVYRNHSKSSKEHDWKIEYKA
SPGNLTQFEEILFGGGSGAEGCAGVVAVRFATGADGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLESLLVQISPKECLLALGEANPEGNKLREVVQRSGMLVSDRKRADFSSKDMVQDL
NRLLRAKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTTLDLGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHSATLQDCYRVYQAVSHIPALITAL
ERYSGSYQFLLEAVFLSPLRDLQNDFTKYQEMIETTLDMNQIDHHEFLVKASFDPVLSEL
REKMDALEKNMQTVLNSAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKTLRNNKKFTT
LDVQKNGVRFTNSKLSSLNEDYTKSREEYEEAQNAIVKEIINISSGYVDPLQTLSDVIAQ
LDAVVSFAVASVSAPVPYVRPRLLDDGCRRMELQQARHPCMETDADTAFIPNDITFVQGE
KSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSVLARVGAGDSQVKG
VSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKIGSFCLFA
THFHELTALATQQPTVHNLHVTALTSHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVV
AMAKEKAEELEEFQEPAGEKSEQEEEPEAKRRRTDKQVGENLIQDFLEKAKSIPAATMTE
EEVKAELKRMKEELMAKKNTFISEILARCVPVKTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaaccgaaacagaacctgtccatggacagtgtagccgagcatggcttccta
aacttctttttctccatgccggagaaaccggactctactttcagaatattcgaccgcaac
gactactacactgttcacgggaaagacgccatattcgcggcgaaggaggttttcaagacg
aatggcgtcatcaaaaatttgggctcagggagtcgcaagctggagagtgtggtcctcagc
aagctcaactttgaggcctttgtgaaagacttgctgctggtgaggcagtacagagtagaa
gtgtacagaaaccacagcaagagcagcaaggagcacgactggaagattgagtacaaggcc
tctccaggaaacttgactcagtttgaggagatcctgtttggcggtggaagcggagcggag
ggctgcgccggagttgtagccgtgcggtttgctacaggagctgacgggcagcgtgtggtc
ggggtgggctatgtggacgcagctcagaggacgatgggagtgtgtgagtttccagacaac
gagatcttctccaacctggagtccctgcttgtccaaatcagccccaaagagtgtctctta
gccctgggtgaagctaaccctgaagggaataaactacgggaggtggtccagcgaagcggc
atgctggtctctgacaggaagagagcagacttcagcagcaaggacatggtccaggatctc
aacaggctgctgagagccaaaagaggagagactgtggccagcaacacactgcctgaactg
gacaaacaggtggctatgtcatgcttggctgcagtcgtgcgtttcctcgaactgctctct
gacgagtccaacttcaactccttcagtctgaccactctggacctgggtcagtacatgagg
ctggacaacgctgccgtcagggctcttaacctcttccagggttcacccgatgacaccagc
ggagctcattcattggccggtctgttgaacaagtgccgtacacctcagggtcagcggctc
gtcaaccagtggatcaaacaaccacttatggacaaaaccaaaatagaggagaggctggac
ctggtggagagtttcgtgtgcgactctgagctgagacagacctgtcaggaggacttgctg
cggcggtttccagatcttcaccgtctggccaagaagttccaccgtcactcggcgaccctg
caggactgttaccgcgtctaccaggctgtgagccacatccctgccctcatcacggccctg
gagagatactcaggtagctaccagtttctgttggaggcagtgttcctctcccctctcaga
gacctgcagaatgacttcactaaatatcaggagatgattgagacgactctggacatgaac
cagattgaccaccatgagttcctggtgaaagcgtcgtttgatccagtgttgagtgagctg
agagaaaagatggacgccctggagaagaacatgcagaccgtgctgaacagcgcagcgaga
gagctaggtctagatgctggtaagacagtgaagctggagtcgaacgccatgctgggcttc
tacctgcgagtcacctgcaaggaagagaagactctgaggaacaacaagaagttcaccacg
ctggatgttcagaagaacggagttcgcttcacaaacagtaagctcagctccttgaacgag
gactacaccaagagcagggaggagtacgaggaggcccagaacgccattgtcaaagagatc
atcaacatttcctcaggctatgtggacccgctccagacgctgagtgatgtcatagcccag
ctggacgctgtggtgagcttcgctgtggcgtccgtctccgctcccgtgccctacgttcgg
cctcgtctgctggacgatggctgcaggcgtatggagctgcagcaggccagacatccctgc
atggagacagacgcagacaccgccttcatacccaacgatatcaccttcgtccagggagag
aagagcttctatattataacaggaccaaatatgggcggcaagtcgacattcatccgtcag
gtgggcgtgatcgctctgatggctcaaatcggctgctttgtgccctgtgagaaggcggag
cttagcgtgattgacagcgtcctggccagggtaggagcgggagacagccaggtgaaagga
gtgtccacctttatgtccgagatgttggagacggctgccattctgcgctcggccacggag
aactcgctcatcataattgacgagctgggcagaggcacgtccacgtacgacggcttcggt
ctggcctgggccatcagcgaacacattgcctccaagatcggcagcttctgcctgtttgcc
actcacttccacgagctgacggcgctcgccacacagcagcccaccgtccacaacctgcac
gtcacggccctgacctcccacaacacactcaccatgctgtacagagtcaaaccaggtgtg
tgtgaccagagttttggaatccatgtcgccgagctggcttgcttcccgccatcggtggtt
gccatggcgaaggagaaggccgaagagctggaggagttccaggagcctgcaggggagaag
tcggaacaggaggaagagcccgaagccaagagacgacgaacagataaacaagtcggggaa
aacctgatccaagacttcctggagaaggcaaagtcaattcctgctgccaccatgactgaa
gaggaggtgaaggccgagctcaagaggatgaaggaggagctgatggccaagaaaaacacg
ttcatctcagagatcctcgcacgctgtgttcctgtaaaaactgcttaa
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