Thunnus thynnus (Atlantic bluefin tuna): 137173021
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Entry
137173021 CDS
T11154
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137173021 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tty03021
]
137173021 (smarcd3b)
03036 Chromosome and associated proteins [BR:
tty03036
]
137173021 (smarcd3b)
Transcription machinery [BR:
tty03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137173021 (smarcd3b)
Chromosome and associated proteins [BR:
tty03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137173021 (smarcd3b)
PBAF complex
137173021 (smarcd3b)
GBAF(ncBAF) complex
137173021 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
137173021
NCBI-ProteinID:
XP_067433797
LinkDB
All DBs
Position
21:complement(9210924..9254035)
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AA seq
516 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQAVQNRARKKPVGFPGANEMPARQMDMREP
QSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALK
RPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDP
RLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQ
RLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIAT
LDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRA
AFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaggga
gctcccatgggcccccccggtccaccgtacggcgggagcccggcggtgcggcccggcctg
ccctccccggtgatggagcccagtcgtaagaggcctgccccctcccagcaggtccagcag
cagcagcagcaacagcagcagcagcagcagcaggccgtccagaaccgggccagaaagaag
ccagtcggattccccggagccaatgagatgccggcgaggcagatggacatgagagagccc
caatcagatcccacgctcggatcaaatgctaagagaaggaaaatggcagacaagattctt
ccgcaaaggatccgtgagctggtcccagagtctcaggcctacatggatctgctggcgttt
gagcgcaaactggaccagaccatcatgcgcaaacgtgtggacatccaggaagcactgaag
agaccaatgaagcagcaaaagcgtaaactgagactttacatatccaacaccttcaaccct
gccagacctgacgccgatgactctgacggcagcattgcatcatgggagctgcgagtagag
gggaagttgctggatgatccggggaagcagaagaagaagttctcttcgttttttaagagc
ctggtgatcgagctggacaaagacctttatggtcctgacaaccacctggttgagtggcac
cgcacggccaccacccaggaaacggacggcttccaggtgaagaggccgggagacgtgagc
gtgcgttgtactctgctgctgatgctggactaccagcctccccagtttaagctggaccct
cgcttggctcgcctgcttggcattcacactcagactcgctcctgcatcatccaggccctc
tggcagtacgtcaagaccaacaagctgcaggactcccatgacaaggagtacatcaactgt
gacaagtacttccaacagatttttgactgccctcggctgaagttttctgagatccctcag
cgcctcaccaacctcctcctgccccccgaccccatcgtcatcaaccacgttataagcgtg
gaccccaacgaccagaagaagacggcctgctacgacatcgacgtggaggtggaagacccc
ctgaagagccagatgagcagcttcctcctctccaccgccaaccaacaggaaatcgctaca
ctcgacaacaagattcacgagaccattgagtccatcaaccagctgaagatccagagggac
ttcatgctcagtttctccagagatcccaagggctacatccaggactggctcaaatcccag
agccgagaccttaagttaatgacagacgtggttgggaaccctgaggaggagaggagggcg
gcgttttaccacgagccctggtcccaggaagccgtcagccgctatttctactgcaagatc
cagcagaggagacaggagctggaacaggccttagctgtccgcaacacttaa
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