Thunnus thynnus (Atlantic bluefin tuna): 137173400
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Entry
137173400 CDS
T11154
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
137173400 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137173400 (sox17)
Transcription factors [BR:
tty03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
137173400 (sox17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
137173400
NCBI-ProteinID:
XP_067434314
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All DBs
Position
21:complement(9686332..9688504)
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AA seq
401 aa
AA seq
DB search
MSSPDAGYASDDQTQARCTMSVMMPGMGHCQWADPLSPLGDTKVKNEPCASGSGGQNRGK
SEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVTEKQPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRIKRLDSGFLVHGVSDHQASAMAGDGRVCVESLGLGY
HEHGYQLPPQPLSHYRDVQALGGPSSEAYSLPTPDTSPLDAVESDSMFFPPHSQEDCHMM
PAYAYHSQAAEYQPQDHLSNHHSNPILHRHPASAPEQPPQSATLPPSYMGCPNPLAMYYT
QHCSTSHPKRHPGGAGQLSPPPDSHPHSAADSMEQMHHSELLAEVDRSEFEQYLSSSSAR
ADMTGLPYGPHEAGMQGPESLISSVLSDASTAVYYCSYNNS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcccgatgcgggttacgccagcgacgatcagacccaggcaaggtgtacgatg
tcagtcatgatgcctggaatgggacactgccagtgggccgaccctctcagtcctcttggg
gacaccaaggtgaaaaacgagccgtgcgcgtccggctccggcggccagaatcgcgggaag
agcgaaccgcggatccgacggcccatgaacgcgtttatggtctgggcgaaggatgagcgc
aaaagactggcgcagcaaaacccggacctgcacaacgcggagctgagcaaaatgttaggg
aaatcatggaaagcccttcctgtcacagaaaagcagccctttgtggaggaggccgagcgg
ctgcgggttcagcacatgcaggatcaccccaactacaagtaccggcctcggcggcggaag
caggtgaagaggattaagaggctggactctggctttctggtccacggcgtgtccgatcac
caggcctcggcgatggccggggacggccgagtgtgtgtggagagtctaggcctgggctac
cacgagcacggctaccagcttcctccgcagcctctcagccactaccgtgacgtccaggct
cttgggggcccctcttctgaggcctacagcctccccacgcctgacacctctccactggac
gctgtagagtcagactccatgttcttccctccacactcacaggaggactgccacatgatg
cctgcttacgcttaccactcccaggcagcagagtaccaaccccaggaccacctctccaac
caccacagcaaccccatcctgcaccgacacccagcctcagctccagagcagccccctcaa
tccgccacccttcccccttcctacatgggatgccccaaccctctggctatgtattacacg
cagcactgcagcaccagccaccccaaacgacatcctggtggggcaggacagctctcccca
ccgcctgactcccaccctcactcagcagcagacagcatggagcagatgcaccactctgag
ctgctggctgaagtggaccgcagcgagtttgagcagtatttaagttcctcttcagcgcgt
gcggacatgacaggtttgccgtacgggccacacgaggctggcatgcaaggacctgaaagc
ctcatatcatcggtgctgtcagacgccagcacagctgtgtattactgtagctacaacaac
tcctaa
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