Thunnus thynnus (Atlantic bluefin tuna): 137173733
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Entry
137173733 CDS
T11154
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137173733 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137173733 (fip1l1b)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137173733 (fip1l1b)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
137173733
NCBI-ProteinID:
XP_067434871
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Position
3:663995..672982
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AA seq
560 aa
AA seq
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MSAEEADKTTTTDASAGDEEEEWLYGDESESKDEDEEAKLNAAVSAPADASTEDAAVAAH
ATGNGVASEAAGEAAGEDVDTDSDSDDDDDDVRVTIGDIKTGAPQYTPYGAPPVNLNIKT
TGSRPYGQVTAKLKGVDLDAPGNINGVPVLEVDMESFEEKPWRKPGADLSDYFNYGFNED
TWKAYCEKQKRLRMGLEVSTVGSVTSKITVQQGRTGNEKDMSSLPVHTSKPDFTSPVTLY
KLQSAVSQVTRISPPQWTGPPAQDMSYYTKTSGTIDVIGGGTATISRVEGRRRHNLDGNN
IQVISEHSTSEAEPAPAKMPAFFPPGPLPPNIPPPPFLPPPPNVSNAPPLIPPPRLPITV
PPPGFPPPPSGPPPAIIPTMDSGHPGGYDGRSVPPYPFPQGAYPPPLAGGVPPPWPPMMD
NSKPWDYYSRRDDKREKERDRPRERTHEREREREHSPSAMGYTSDEERYRYREYQERGYG
ERHRDRTSREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSK
EGKEASEEISADQGNQEAME
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaggcggacaaaacaaccaccacggacgccagcgccggagatgaagag
gaggaatggctgtatggagatgagtctgagagcaaagacgaggatgaagaagccaaactc
aacgctgctgtcagcgcacctgctgatgcttcaacagaggacgctgctgtcgctgcacac
gctacagggaacggagtggcgtccgaggctgctggtgaagcagcaggtgaggatgtggac
accgacagcgacagcgatgatgatgatgatgatgtccgcgtcaccatcggagacataaaa
actggagcaccacaatacacaccttacggagctccacctgtcaacctcaacataaaaaca
acaggctccaggccttacggacaagtgaccgcgaagctgaaaggagttgatctggatgct
cctggaaacatcaacggggttccagtgctggaggtggacatggagtcctttgaagagaaa
ccctggaggaagccaggagcggatctgtcagactactttaactacggcttcaatgaagat
acgtggaaggcttactgtgagaaacagaagaggctgcgtatgggcctggaggtctctact
gtcggctcagtgaccagtaaaatcactgttcaacagggcaggacagggaatgagaaggac
atgtccagtctgcctgttcacacctctaaaccagacttcacatctccagtcaccctgtac
aagctccagtcagccgtcagtcaggtcacaaggatctctccccctcagtggactggcccg
cctgctcaggacatgtcctattatacgaagacgagcgggactatagatgtgatcggtgga
gggacggccaccatcagcagggttgaagggcgacgcagacacaacttagacggcaacaat
atccaggtgatctctgaacactccacatctgaggctgaacctgctcctgctaagatgcct
gccttcttcccccccggaccacttcctccaaacatacctccacctcctttcctccctcca
cctcccaacgtcagcaatgcacccccgctcatccctccgcccaggttgcccatcactgtc
cctccacctggttttcctcctccacccagtgggcccccacctgctatcattcccaccatg
gacagtggccaccctggaggttacgacggacgctctgtccccccgtacccgttccctcaa
ggtgcgtaccctccacccttggctggtggtgtgccccctccttggcccccgatgatggac
aactctaagccctgggactactattcccgtcgagacgacaagagagaaaaggaaagagac
aggccgagagagaggacgcatgagcgggagagagagagggagcacagcccgtcagctatg
ggctacaccagtgatgaagagcgatatcgttaccgcgagtaccaggagcgcggttacgga
gagcgccatcgtgaccggacgagccgagagaaggaggagagacacagagagaggcggcac
cgggagaaagaggagggacgccacaagtcctctcgcagcagcagtagcaggaggaggcac
gacagcgaggagggcgacagccaccggaggcacaaacacaagaagagcaagaggagcaaa
gaaggcaaagaggcgagcgaggagatcagcgcagaccaagggaaccaggaggccatggag
tga
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