Thunnus thynnus (Atlantic bluefin tuna): 137173811
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Entry
137173811 CDS
T11154
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tty
Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137173811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tty03036
]
137173811
Chromosome and associated proteins [BR:
tty03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
137173811
REST complex
137173811
Heterochromatin formation proteins
Other heterochromatin formation proteins
137173811
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
137173811
NCBI-ProteinID:
XP_067435013
LinkDB
All DBs
Position
1:9782409..9801036
Genome browser
AA seq
1294 aa
AA seq
DB search
MKRRVEDQEPIFASQQQQSRRPPVQGIAESFQHRALAPAPTVIEAAADNMQPSTGIQYSL
PQGYQVPTMPQSTGGHGHNSTAPHVGPHAHSIAVQSQGPAVVQGHVHPPAPLTSAQGQQQ
FQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPD
LIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVQNIPVSGASSQPASQHQHQ
SLPQAGPHTTTTTTTTPPIPAQPAANKTNKPMQSPAHTPTSQPNPSIPSYASPRSPSVQS
HTPVSSTPSGGPPLQNNQPVEFNHAINYVNKIKNRFQDQPDIYKAFLEILHTYQKEQRNA
KEAGGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTAPDRAESVRN
DHGGTVKRPLLNNKQRLSQNGLPIRRPVGVGVTPPVKKKPKIGMKDHGMTEVSKHSTSTE
TMFFEKVKKALRSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELFTWFKNFLG
YRESSHGESSQAESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCR
EVLNDTWVSFPSWSEDSTVVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETVQR
RLSRMSAEEQLRFKLDNTLGGSSEVIHRKAIQRIYGDKAHDIIDGLKKNPAVSVPIVLKR
LKIKEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVFRSKTLLNEIEMLYD
ERQERASEETATPPPSGPHMNLTYDDSQILEDAAALIIHHVKRQVGIQKEDKYKIKQIIH
HFIPDLLFARRGELSDVEEEEEEEEEDMDVDQDGPKKHNGLPGNSPSKSKLLFSNTAAQK
LRGTDDAYNLFFVNNYWYIFLRLHHILCSRLLRIYGQAEKQIEEDAREKEWEREVLGLKR
EKNENPAIQLKMKEPMDVDVEDYYSVFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYIAF
TMDKLIQSIVRQLQHLVTDDVCARVTDLYLSESANKATGGTLSTQASRAAAEGTYQRKAE
QLMSDENCFKLMFMKNRGSVSLAMELLDTEEENSDEPAEAERWSDYVGRYLNSDSASPEL
REHLAQKPVFLPRNLRRIRKCQRGWEQLQQERMTKGTSDKSQDGKSELKMECMFKLNSYK
MVYVCKSEDYMYRHTALTRAHQSQQRVNTRLHRRFQTWLDSWAKEHVTSDMAADNRKWLM
GDGQEGLVPCTTSSNPEVLHYLNINKYRVKYRTL
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgtgtggaggaccaggaaccaatatttgcatcccagcaacagcaatcacgt
cgccccccagttcagggtattgcagagagcttccagcaccgggccctcgccccggcccct
actgtgatagaggcagccgcagacaacatgcagccctccaccggcatccagtattctctc
ccccagggctaccaggtgcctacaatgcctcagagcacaggaggtcatggacataacagt
actgcacctcatgttgggccccatgcacacagcatagcagttcagtcccagggccctgca
gtggtccagggacacgttcatccacctgcacccttgacttcagcccagggacagcagcag
tttcagcgactgaaggttgaagatgccttgtcctatctggatcaagtgaagctgcagttt
gggaatcagccacaagtttataatgatttccttgatattatgaaagagttcaagtcacag
agcatagacactcctggagttatcagccgtgtgtcccaactcttcaagggccatccagac
ctcatcatgggtttcaacactttcttgccacccggatataagattgaggttcaaaccaac
gatctggtcaatgtgaccacgccaggtcagattcactacatcacccctcatggtatctct
gttcagaacatccctgtaagtggagcatccagccaacctgcgagccaacaccagcaccag
agtctgccacaggctggcccgcacaccaccaccactaccactaccaccccacccatcccc
gcccagcctgcagcaaacaaaaccaacaagccgatgcagtctccagcccacacccccacc
agccagcccaacccatccatcccatcctacgcctcaccgcgctcgccttcagtccaatcc
cacactcctgtgagcagcacaccgtccggtgggccacctctccagaacaaccagcctgtg
gagttcaatcacgctataaactacgtcaacaagatcaagaaccgcttccaggaccagcca
gacatctacaaagccttcctggaaatcctgcacacataccagaaggaacaacgaaatgct
aaagaggcaggaggcaactacaccccagcactgactgagcaggaggtctacactcaggtg
gcgaggctcttcaagaaccaggaagacctgctctcagagtttggacagttcctccctgat
gcaaacagctcagtgctgttgagcaagactgcgccagacagggcagagtcagtgcgtaac
gatcacggtggcacagtaaagagacctttactaaacaacaaacaaagactgagccagaac
ggcctgccgatcaggagacctgtgggagttggagtcacgccacctgtcaagaagaaaccc
aaaatagggatgaaggaccatggcatgactgaagtcagcaaacacagcaccagcactgaa
actatgttctttgagaaggtaaagaaagctcttaggagctctgaggcttatgacaacttt
ctgcggtgtctgcacatcttcaaccaggaagtgatttcacgtgctgagctggttcaatta
gtcatcccatttcttggaaaattcccagagctttttacatggtttaaaaacttcctgggc
taccgagaatcaagccacggtgagtcgagccaagcggagagtttacccaaggagcgtgca
acggagggtatcgccatggagattgactatgcttcctgcaagaggctggggtccagctac
agagcactgccaaaaagctaccagcagcctaagtgcacagggaggacgccactgtgcaga
gaagttctgaatgacacatgggtgtcgtttccatcatggtctgaggattctacagttgta
agctccaagaagactcagtatgaggagcacatttacagatgtgaggatgagcgctttgag
ctggatgtcgtgttggagaccaaccttgccacgatacgagtcctcgagacagtgcagcga
cggctttctcgcatgtctgctgaggagcagctgcgcttcaagctggacaacacgttgggc
ggctcctcagaggtcattcatcgcaaagctatccagaggatatatggggacaaggcccac
gacatcatcgacgggcttaagaagaacccagctgtgtccgtccccatagtgctcaagagg
ttaaaaataaaggaggaggagtggagagaagctcagagaggcttcaacaaaatctggcgg
gagcagaatgagaaatattacctgaagtcactcgaccatcaaggcatcaacttcaagcag
aatgataccaaagtgtttcgctcaaagaccctgctcaatgaaatcgagatgctgtatgat
gagcgccaggagcgagcatcagaggaaactgccacaccgcctcccagcggcccgcacatg
aacctgacctacgatgacagccagatcctggaggacgccgctgccctcatcatccaccat
gtcaaaagacaagttggcatccagaaagaagacaagtacaagatcaaacagatcatccac
cacttcatccctgacctgctttttgctcggcgaggtgagctctctgatgtggaggaagag
gaagaagaggaggaagaggacatggacgtggatcaagacggtcccaagaagcacaacggc
ctgccgggcaacagcccatcaaagtccaagctcctcttcagcaacacggcggctcagaag
cttcggggcacagacgatgcttataatctgttcttcgtgaacaactactggtatatcttc
cttcgtcttcatcacatcctctgctctcgtttgctgcgaatctacgggcaggcggagaag
cagatcgaggaggatgcccgtgagaaagagtgggagagagaagtgttggggctgaaaaga
gaaaagaatgaaaatccagcaattcagcttaagatgaaggagccgatggatgtcgatgta
gaagactattactcggtctttctggagatggtgcgtaaccttttggatggaaacatggag
ccggctcagtacgaggactccttgagggaaatgtttactatccacgcctacattgccttc
accatggacaaactcatccagagcattgtccggcagctccagcaccttgtcactgatgat
gtgtgcgcacgtgtgacagacttatacctgagcgaaagtgccaataaagccacagggggc
acgctgtctacgcaggcgtccagggccgcagcagagggcacctaccagcgcaaagcagag
cagcttatgtctgatgagaactgcttcaagttgatgtttatgaagaaccgaggttctgtc
agtctggccatggagctgctggacacagaagaggagaactctgatgagccagccgaggca
gagaggtggtcagactacgtgggcagatacctgaactcagattcagcctccccagagctg
cgtgagcatttggcccagaagccggtgttcctccccaggaatttgagacggataaggaag
tgtcagagaggatgggaacaactgcaacaggagagaatgaccaagggcacctccgacaag
tcgcaggacggcaagagtgaactaaagatggagtgcatgttcaagctcaactcctacaag
atggtgtacgtctgtaaatcagaagactacatgtacaggcacacagcgctcacacgggct
catcagtcccaacagcgggtcaacacacgcctgcacagacgctttcagacctggctggac
tcctgggccaaggagcacgtgacgagcgacatggccgccgacaaccgcaagtggctgatg
ggagacggacaagaaggcctggtgccttgtaccacctcctccaaccccgaggtcctccat
tatctcaacattaacaagtaccgggtgaagtacagaacactgtag
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