KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137174077
Entry
137174077         CDS       T11154                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04382  Cornified envelope formation
tty04510  Focal adhesion
tty04512  ECM-receptor interaction
tty04518  Integrin signaling
tty04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tty00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137174077 (col4a5)
   04518 Integrin signaling
    137174077 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137174077 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137174077 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    137174077 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tty04147]
    137174077 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:tty00536]
    137174077 (col4a5)
Exosome [BR:tty04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   137174077 (col4a5)
Glycosaminoglycan binding proteins [BR:tty00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137174077 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 137174077
NCBI-ProteinID: XP_067435224
LinkDB
Position
22:complement(20374713..20430959)
AA seq 1682 aa
MSKDLNSLRQLAVALLFFALCVAVQQSDSAACHGCVGSKCDCSGVKGAKGERGFPGLTGQ
PGVPGFPGPEGPIGPRGEKGSDGPQGLAGPKGIRGPSGLPGFPGTPGLPGLPGQDGPPGP
RGTPGCNGTKGDRGFPGSGGIPGQQGRPGPPGLPGPKGDPGDVISTNRFGEKGAVGLPGL
PGVPGTQGPSGFQGPVGPPGPRGFEGPPGPPGAPGPKGNMGLNFQGPKGEKGETGLPGPP
GPPGQVGEQKRPPETEIQRGDKGDPGIPGPAGDPGYPGPPGPSGGQKGEKGEPGEAGKRG
KPGKDGDPGSPGFPGIKGESGLPGPPGRDGDRGLKGDRGYPGPPGLVIGGQTGARVGPKG
EPGFPGAPGLKGDRGPAGLTGPPGPPGLPAIGAGGGPGSPGYPGERGQKGEQGAPGLSLP
GPPGRPGSPGLQGPVGPPGPPGYSSGGQNCIGGEPGRPGLQGERGYPGETGQKGEKGDTC
VNCYGGTSGVPGPPGPAGKPGFPGSPGSPGAKGDRGFPGTPGSPGSAGSPGPQGSPGFPG
EKGDPGDAITVSGLRGEKGDTGFPGPPGLPGLDGRPGRDGQPGGPGPKGVPGSLLVKGER
GLPGVPGSPGLPGDRGPPGSPGFGPQGPPGEKGIQGVSGRPGGPGAPGAKGEPGLTVAEK
GLPGPRGQDGEPGSPGSPGSPGQPGQPGFPGSPGAKGEPGLPGIGLPGPPGVKGFPGIPG
QPGSPGGPGRPGVDGLPGQPGFPGAKGEPGFGLPGPPGSPGVPGGKGIPGLKGDAGLPGS
PGAPGRSGFDGGPGPKGDAGIPGIPGARGPAGSPTIGLVGPPGPPGPPGVMGAPGFPGGN
GEKGDPGAPGLDVPGLPGDRGSPGFPGSPGPVGAPGPPGGSGRDGLPGLPGAKGDMGPMG
PPGPGGGPGGPGGPGAPGLKGEPGFPGRDGSPGGPGAKGERGDAGVQGPPGPTQPVVAVK
GAKGDSGLPGAPGLPGQKGIAGVSGDPGLPGSDGRPGLPGPSGPKGDPGIPGGPGGPGAP
GQKGAMGEIGFPGPSGQKGLSGQPGRPGSPGLPGSPGFPGAKGDPGSAGVGPPGPPGIKG
EPGQPGFPGGPGLKGGPGSPGLPGLPGGPGSKGDPGLPGFQGSPGIPGAKGLDGGPGAPG
LTGAPGRPGESGRPGGPGFPGEKGQAGRDGIPGPAGVKGEPGLPGYGGPGPAGLPGLPGA
KGDPGLPGPSGSPGFPGAKGDTGFPGLPGNAGSIGSPGPPGLALQGPKGIQGPPGPPGRA
GAPGPEGPRGPQGIGGIKGEKGLAGSPGQPGFPGQKGDLGSPGFSGPSGIPGGPGAKGDI
GLPGVPGFPGPKGDPGIPGSSGLPGDPGDIGLPGPPGDPGVSPAPIVVKGERGPPGPVGQ
PGGPGLPGSPGRDGLPGQSGDPGDSGPEGPPGFSGPPGRKGDNGPAGQPGTPGYPGPPGS
DGPQGPPGPPGSVSAAHGFLITRHSQGAEVPPCPDGTGIVYDGYSLLYVQGNERAHGQDL
GTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPQPMPMSMAPITGESIKPYISR
CAVCEAPAMVIAVHSQTIQIPSCPARWVTLWIGYSFMMHTSAGAEGSGQALASPGSCLEE
FRSAPFIECHGRGTCNYYGNSYSFWLATVDANEMFRKPQSETLKAGNLRTRVSRCVVCMK
RT
NT seq 5049 nt   +upstreamnt  +downstreamnt
atgagtaaagacttgaacagcctgcgacagctcgccgtagcactgctcttcttcgccctg
tgcgtcgcggtgcagcaatccgactcagcggcttgccatggttgcgtgggatccaagtgt
gactgcagtggcgtaaaaggagccaagggtgagaggggtttcccaggtctcaccggacag
ccaggcgtcccaggattccccggacctgaggggccgatcggacccagaggagaaaaggga
agtgatggacctcaaggactagctggcccaaaaggaataagaggaccttctggattgcca
ggatttccaggaacaccaggacttccgggtctgccagggcaggacggacctccaggccca
agaggaacaccaggttgcaacggcacaaaaggtgatcggggtttcccaggatctggagga
atccctggtcaacaaggacggccgggtccacctggtcttccaggaccaaagggagaccca
ggtgatgtgatctccaccaaccgtttcggagagaaaggagcagtgggattgcccggattg
ccaggagttcctggcactcaaggaccctccgggtttcaaggtccggtcggccctccagga
cccagaggcttcgagggccctccaggtcctcctggtgctccaggacctaaaggaaacatg
ggattgaacttccaaggacccaaaggagagaagggtgagacaggtttgccaggacctccc
ggccctccagggcaggttggggaacagaagaggccacctgagacagagatccagagggga
gacaagggtgacccaggtattcccggccccgcaggtgatccaggctatccaggacctccc
ggtccctccggtggccagaaaggagagaaaggagaaccaggagaggccggcaaacggggc
aaaccaggcaaagacggagaccccggttctccaggcttccctggaatcaaaggagagtca
ggcctgccaggtcctccaggcagggatggagatagaggactaaaaggtgatcgcgggtac
ccaggaccaccaggactggtgattggtgggcagactggagctcgggtaggtcctaaaggt
gagcccgggttccccggagcaccaggactcaaaggagaccgaggaccagcaggtttgaca
ggacctccaggaccgccaggacttccagcaattggtgctggtggtgggcctggatctcca
ggctacccgggagagagaggtcagaagggagaacaaggcgctccagggctttccctgcca
ggtcccccaggacgtccagggagtcctggactccagggtccagttgggccccctggacct
ccaggctattcctctggaggacaaaactgcatcggtggagagcctgggcgtcccggcttg
cagggagagagaggttacccaggagaaacgggccagaaaggtgagaaaggtgacacctgt
gtgaactgctatggtggcaccagtggcgtccctggacccccaggacctgcaggaaagcct
ggattcccaggatctcctggcagcccaggtgctaaaggagacagaggattcccaggaaca
cctggttcacctggttccgctggttcccctggtcctcaaggttctccaggattccctgga
gagaagggagacccaggtgatgccatcactgtcagcggtctgaggggagagaagggtgac
accggcttccctggaccacctggtctgccaggtctggatggtcgacccggtcgcgatgga
cagcctggaggtcctggaccaaaaggagttcctggctctttgctggtgaaaggagagcga
gggctccccggtgtgccaggttctccagggcttccaggagacaggggtcctccaggttcc
cctggttttggacctcagggacctccaggagagaagggtatccagggcgtttcaggaaga
cccggagggcctggagcacccggtgctaaaggtgagccaggtctgacagtggcggagaaa
ggcctgccaggacccagaggacaggatggcgagccaggatctcccggttctccaggtagc
ccaggtcagcccggccagcctggtttccccggatcaccaggagcgaagggtgaacccgga
ctcccagggattggactcccaggaccaccaggagttaaaggattcccaggtatccccggc
cagccaggaagcccaggaggaccaggcagaccaggagtagacggcctccccggccagccc
ggattccccggggccaagggtgaacctggctttggacttcctggtcctccaggttcacca
ggagtgcctggaggtaaaggaatacccggactcaagggagatgctggtctccctggtagc
cctggagcaccagggcgatctggatttgatggtggtccaggacctaaaggtgacgctggt
atacctggtatccctggagctcgtggcccagccggatcccccaccattggcttagttggg
cccccaggcccccctggacccccaggcgtgatgggtgcaccaggattcccaggaggaaat
ggagagaagggagaccccggcgctccaggtctagatgtcccaggattaccaggagacaga
ggaagtcccggtttcccaggttccccaggaccagtgggtgccccaggaccccctggagga
tctggacgggatggcctgcctggactaccaggtgccaaaggagacatgggtcccatggga
cctccaggacctggtggaggacctggtggccctggaggaccaggtgctccaggacttaaa
ggtgaacctggattcccaggtagagatggctcacccggtggtcccggtgctaaaggagaa
aggggtgacgctggtgtccagggacctccaggacccacccagccggtagtggccgtaaag
ggagccaaaggagactcaggactaccaggtgcaccaggtcttccaggtcagaaaggcatt
gctggtgtatccggtgaccctggactgccaggatcagatggacgtcctggacttcctgga
ccatcaggtcctaagggagatcctggcatcccaggaggcccaggtggtcctggggctcca
ggacagaaaggcgctatgggagagataggatttccaggaccgtctgggcagaagggttta
tcgggtcagccaggtcggccaggatccccaggattgccaggatcacctggtttccctgga
gccaaaggtgatccaggttctgctggagtcggaccacctggaccaccaggaatcaagggt
gagccaggccagccagggttcccaggaggtccaggactgaaaggaggtccaggatcaccc
ggtctcccaggtttaccaggaggaccaggttccaaaggcgaccccggtctcccaggattc
caaggttctcccggtatccccggtgctaagggtctcgatggtgggcccggtgccccaggt
ctcactggagctcctggtagaccaggagaatctggccgaccaggaggaccagggttccca
ggagagaaaggtcaggcaggtcgggatgggatcccaggaccggctggagtcaaaggagag
ccagggcttcccggttatggcggtccaggtcctgctgggcttccaggattgccaggtgct
aagggagacccaggtcttcctggcccatctggaagccctggtttccctggtgcaaaagga
gacactggcttccctggcctgccaggtaatgcaggcagcattggctctcctgggcctcca
ggactggcgctgcaaggccccaaaggaatccaaggacccccaggaccacctggaagagca
ggtgcacccggcccagagggtcctcgtggaccccaaggaataggcggcatcaagggagag
aagggtcttgccggctcgcccgggcagcctggctttcctggacagaagggagatcttggt
tctccaggattctcgggtccctctggtattcctggtggccctggtgcgaagggagacatc
ggtctgcctggcgttcctggattccctggaccaaagggagacccaggaattccaggttct
agcggccttcccggagatcctggagatatcggacttcctggacctcctggtgaccccggt
gtatctccggcccccatcgtagtgaagggagagcgaggaccccctggtcctgtgggccag
cctggtggtccgggactacctggctcccctggacgtgatggactcccaggtcagtctggt
gaccccggggattctggtccggagggtccccctggattcagtggcccgccaggcaggaag
ggagacaatggacccgccggtcagcctggtacacctggctaccccggtccccctggttca
gatggtccacagggtcctcccggtcctccaggatcagtttcggcagcccacggcttcctc
atcacccgacacagccagggtgcggaagtgccaccctgtcccgatggaactggcattgtc
tatgacggatactcgctgctgtatgtgcagggtaacgagagggcgcacggacaggacctt
ggcacggccggcagctgtctgcgcaggttcagcaccatgcccttcatgttctgcaatatc
aacaacgtctgcaacttcgcctcccgcaacgactactcctactggctgtccacaccccag
cccatgcccatgtccatggcccccatcactggagagagcatcaagccttacatcagcagg
tgtgcagtgtgtgaagctccagccatggtgattgcagtccacagtcaaaccatccagatt
cccagttgccctgcgcgttgggtgactctgtggataggatactccttcatgatgcatacc
agcgcaggtgcagagggctccggccaggccctggcctcccccggctcctgtctggaggag
ttccgcagtgctcccttcatagagtgccacggcagggggacatgcaactactacggcaac
tcctatagcttctggctggccacagtagacgccaatgagatgttcaggaagccccagtcg
gagactctgaaggcgggtaacctacggacgcgggtcagccgttgtgtggtctgcatgaag
aggacgtaa

DBGET integrated database retrieval system