Thunnus thynnus (Atlantic bluefin tuna): 137174260
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Entry
137174260 CDS
T11154
Name
(RefSeq) ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137174260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tty03041
]
137174260
03009 Ribosome biogenesis [BR:
tty03009
]
137174260
Enzymes [BR:
tty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137174260
Spliceosome [BR:
tty03041
]
Complex A
U2 snRNP components
U2 related factors
137174260
Complex B
137174260
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
137174260
Ribosome biogenesis [BR:
tty03009
]
Eukaryotic type
90S particles
Helicases
137174260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
Cas3-like_C_2
AAA_29
Flavi_DEAD
nSTAND3
AAA_25
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
137174260
NCBI-ProteinID:
XP_067435540
LinkDB
All DBs
Position
22:10006540..10031455
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AA seq
753 aa
AA seq
DB search
MLYRHRSDLGDDYLSSRNRCSDGDRDRDVRSRYRERDRDRDRDGDRVKYSGMPNNPTAGS
GGFFKQTPLQQQINPFTNLPHTPRYYEILQKRLQLPVWEYRESFTDILMRNQSFVLVGET
GSGKTTQIPQWCVEMVRSMPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIR
FEDCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQ
RPDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQI
HMCEEDEGDVLLFLTGQEEIDEACKRIKREVDDLGPDVGDIKIIPLYSTLPPQQQQRIFE
PPPPNKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAIS
KASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDL
VHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCEFN
CSNEVLSITAMLSVPQCFVRPTEAKKVADESKMRFSHIDGDHLTLLNVYHAFKQNHESTQ
WCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRVLVTGFFMQVA
HLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIA
PQYYEMSNFPQCEAKRQLERIIAKLSSKEYTQY
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccgacatcgttcagatttgggtgatgattatttgtcgagtagaaatagatgc
tctgatggggacagagaccgtgatgtgcggtcgaggtacagggagcgtgaccgggacagg
gatcgagacggggacagggtgaagtactccgggatgcccaacaaccctactgcaggcagt
ggaggcttctttaagcaaacccccttacagcagcagatcaacccctttaccaacctgccc
cacacgccacgctactatgagatcctccagaagcgactgcagttacctgtctgggaatac
agagagtccttcactgacatcctgatgcgtaaccagtcttttgtgctggttggagagacc
ggctctggaaagaccacacagattcctcagtggtgtgtggaaatggtacggtcaatgccg
ggaccgaagagagcagtggcctgcacccagcccaggagagtggctgccatgagtgtcgcc
cagagggtggctgacgagatggatgtgatgttgggccaagaggtgggctactccatcagg
ttcgaggactgcagctctgccaagactgtcctcaagtacatgacagatggaatgttgctg
cgggaggctatgaacgatcccctgctagagcgctatggtgtcatcatcctggatgaggcc
cacgaacgcacattagctacagacatcctcatgggggtcctcaaggaggtggtccgccag
cggcctgacctcaaggtcattgtcatgagtgccacactggatgccggtaagttccaggtg
tactttgacagctgcccattgctgaccatccccggacgcacgcaccccgtggagattttc
tacacgcccgaaccggagcgagactacctggaggccgctatccgcaccgtgatccagatc
cacatgtgcgaggaggatgaaggggatgttctgctcttcctcaccggacaagaggaaatc
gacgaagcctgcaagcgaatcaagagagaggtcgacgacctggggcccgatgtcggtgac
atcaaaatcatcccactgtactcgacgctgcccccgcagcaacagcagaggatcttcgag
ccacccccacccaataaaccaagcggtgccatcggaaggaaggtcgttgtgtcaacaaac
atcgcagagacgtccctgaccattgacggcgtggtgtttgtaattgatcccggatttgcc
aagcaaaaggtgtataacccacgtatcagagtggaatcacttttggtgacggcaatcagc
aaagcctcagcccagcagagggcaggtcgtgctggacggacacgcccagggaaatgtttc
cgcctttacactgagaaagcttacaagacagaaatgcaggacaacacgtatccagagatc
ctgaggtctaatctgggctcagtggtgctgcagctgaagaaactgggtattgacgacctg
gtgcactttgacttcatggacccaccagccccagagaccctgatgcgagccctggagttg
ctgaactacctggcagcgctcaatgacgacggtgacctgacggagctgggctccatgatg
gcagagttccccctggacccccagctggccaagatggtcatcgccagctgtgaattcaac
tgttcgaacgaggtcctctccatcactgccatgttgtcagtcccacagtgcttcgtccgg
cccacggaggctaagaaggtggctgatgagtccaagatgcgcttttcccacattgatgga
gaccacctgacgctgctcaacgtctaccacgcctttaaacaaaaccacgagtccactcag
tggtgctacgacaacttcgtcaactaccgctccctgatgtcagcagacaacgtacggcag
cagttgtccaggatcatggaccgtttcaacctgccgcggcgaagcactgagttcaccagc
agagactactacatcaacatccgccgagtgctggtcactggcttcttcatgcaggtcgct
cacctggagcgcacaggccattacttgacggtgaaggacaaccaagtcgtacagctgcac
ccctccactgtgctggaccacaagcctgagtgggtgctctacaatgagttcgtgctcacc
accaagaattacatccgcacgtgcaccgacatcaaaccagagtggctggtgaaaattgcc
ccgcagtactacgagatgagtaacttcccccagtgtgaagcaaagagacagttggagcgt
atcattgcaaaactctcatccaaggaatacactcagtactaa
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