Thunnus thynnus (Atlantic bluefin tuna): 137175098
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Entry
137175098 CDS
T11154
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty02010
ABC transporters
tty04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
137175098
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137175098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tty02000
]
137175098
Transporters [BR:
tty02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
137175098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
137175098
NCBI-ProteinID:
XP_067436890
LinkDB
All DBs
Position
22:11678360..11864915
Genome browser
AA seq
2248 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVEVIWPLFLFFILVWVRSTNKPIFKGQCHYPNKA
MPSAGVLPWLQGMICNIDNPCLNYPTPGETPGQVNNFNNSIISGMLIELQTLLVNRSILN
KAQLLADDVDQWASVLSQSNPGNGQPVILGSILRENETFSKHLKENLSVPPTVVQSLLAA
KIYVNPMTGILRPGELRSILCEGTDLDEYVQFSSQAEKGAFQNVSCSLTPQQLINTQEVL
LQNLDARKVLSELPSALDLNAADTVTLIGKTTADALPVIREMARLRNSMIFKAASSLDFQ
EDMIGSINTLLCGKQPDFNSTNMTLSLPSSRQMANTKAMSSMSNSSDAFCQTLVDTLEGT
PGLRYIWSTFKPLLQGKVLYTPDTPAARLVVKEANSTFNALAMLKDLADSWEVLGPRVWN
FFQNSTQVNTLRALLANPLFAAALNQRLNGTGWTAELLANFLYNGPPEDRPVGMPPSDWR
DVYNSTTQILKLLSNFLGCLDLNKFEAAPSESHLVTKALQLLKNDTYWAGVVFENLQPYS
GQPPPYVKYKIRMDIDEAERTNKVKDRLWSPGARDNSFNDLRYIWGGFAYLQDMMDHGII
RTQTSKTQPLGVFAQQMPYPCFVDDVFLRSLAQSLPLYMTLAWIYSVAMIVKGIVAEKEA
RLKETVRIMGLRSAIYWLSWAVSSVLPLAISALFLTLILKYGKVLQYSDPSVIFVFLLVF
CLVTITQCFFISVFFSKANLAAACGGLIYFVLYLPHILCYAWRDVMGFGAKVAVSLLSCV
AFGYGCENFSKYEEQGIGIQWSNIGKSPEEGERYTFIVSIIMMLFDAVIYWVLTWYIENV
FPGQYGIPKPWYFPFTASYWCGTASVTDVDPGLLTDSGAHNEYLEKPPPNMKAGVSIRNL
VKIYKTGKKLAVDGLSVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGFDI
HTDMDSIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGCSRDEVKIEMDQMIKDVGLPHK
RKDLAKNLSGGMQRKLSVAIAFAGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTII
LSTHHMDEADILGDRIAIISHGKMRCCGSSLFLKKCFGSGYYLTLVRDGNEKMTSQRNGV
IHSQAKKEKDCPSRSSSPDDGIGSQSWGNSDPSDLTAVGQLVRRHVPEAVFLENIGQEIT
YILPYGGARDGTFALLFHELDLALADLGLTSYGISDTTLEEIFLKVAEDTGVDAEISTTQ
ELLVRDCKRSSRESKRNSIAGVQTKTEISGFSDLKEKFTSKVEDSKRNASVNGRGSTVIT
GWELIRRQFLALFIKRFHHARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFSEYPSLELQ
PWMYGLPQTTFYSNDGPDNVEVSHVVETLVNNPGFGTRCMKGDPIPKLPCASSGSEWFTP
SVDQSVTDIFLNGNWSMSNPSPSCQCSTPKRTIMLPDCPLGAGGLPPPQRIQNTTDTLLN
LTGRNMTDFLVKTFEHSGKTRYGGISVGAVNSQVRLTEAAIEAAFRDLKDLFTSFQDNVT
DQILQNAETLLKKLGTRNNVKVWFYNRAWHGMASFLSVANNAILRGNLPAGQDPRQYGIS
VSNHPLNLTKQQLSYVAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFV
SGVNPAVYWLANFVWDMCNYIIPCLIVIVIFLCFQQKAYVSPPNLPALVLLLILYGWSIT
PMMYPASFIFSVPSTAYVVLTCINLFIGINGSVATFVMELFDDDNVSRINNIVKQVLLIF
PHFCLGRGLIDMAKNQAMATLFSSFGEDRFKDPLSWEMVGKNLCAMSIQGVVMFTVTILI
QYKFFCKPRLISGKSLSAEEEDIDVARERERVYEGRAQNDLLRICDLTKVYPRKSTPAVD
RLCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSGGEAFLNGYSIRTEMRDVHQNTGY
CPQFDAIDDLLNGREHLEFYARLRGVPEKEVTMVAEWGIQKLGLVKYSNKSAGTYSGGNK
RKLSTAMALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEAL
CTRMAIMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVQLTFPGSTLTE
KHHNTLQYQLPYTQGALANIFSQFTTHQQRLGVEDYSVSQTTLDQVFVNFAKHQHGEEDS
QAYDNPVDTSDEVPMKSVTTSREMSEKA
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggttcggttggtcgttgaagtgatttggcctctgttcctcttctttatattggtg
tgggtgcggtccacaaacaaaccaattttcaaaggccaatgccactaccctaataaagcc
atgccatcagctggcgtgctgccctggcttcaaggtatgatttgtaatatcgacaatccc
tgtttgaactatccaacaccaggggagacaccaggccaagtcaacaacttcaacaactcc
ataatttctgggatgttgattgagctgcaaaccctcctggtaaacagatctattctcaac
aaggcacaactactggcagatgatgtcgaccagtgggcttcagtcctgtcacagtccaac
cctggtaatggtcaaccggtgatcctggggagtattctaagagaaaatgaaactttctcc
aagcatctgaaagagaatttgtcggtgccaccaacagtggtccaaagccttcttgctgct
aagatttatgtcaatccaatgacaggcatcctgagaccaggtgaactgaggagcatcctg
tgtgaggggacagatctggatgagtatgtccaatttagcagccaagctgaaaagggggca
tttcaaaatgtcagctgctccctcactccacagcagctgattaacacccaggaagtacta
ctgcaaaacctggacgcaaggaaggtgctttctgagctcccttcagctttggatctgaat
gcagctgacacagtgacactgattgggaaaaccactgcagatgcattaccagtgattcgt
gagatggccaggttgcggaactccatgatctttaaggctgctagttcattggatttccag
gaggacatgattggcagcatcaatacgttactgtgtggaaagcaacctgacttcaactcc
accaatatgaccctcagtttaccctcatctagacagatggctaacactaaggcaatgtcc
tctatgagcaacagttccgacgctttttgtcagactctcgtcgacaccctggagggcaca
cctggtttacgatacatttggagcaccttcaagccgttattgcaagggaaagtcctctac
acacctgatacacctgctgctcgcctcgtggtgaaagaggcaaatagcacattcaatgcc
ttggctatgttgaaagacctggctgattcatgggaggtactcgggccacgtgtctggaat
ttctttcaaaatagcacccaagtcaacacattacgggctttactggcaaatccactgttt
gctgctgccctcaaccagcgtctcaatggcacaggatggacagcagagctgctggccaac
ttcttgtacaacgggcctccagaggatcgtccagtcggcatgccgcccagtgactggcgg
gatgtttacaacagcactacccaaatcctgaagcttctctccaacttccttggttgttta
gacctgaacaagtttgaggcagcccccagtgaaagccatctggtaaccaaagccttgcag
cttctgaagaatgatacgtactgggccggcgttgtctttgaaaacctccagccgtactcc
ggccaaccccctccttatgtcaagtacaaaatccgcatggacattgatgaggcagagcgc
accaacaaagtgaaagacaggttatggtctcctggagcccgagacaactcctttaacgac
ctgcgctatatatggggaggctttgcctacctgcaggatatgatggaccatggcattata
cgaacacagacatcaaagacccaaccccttggtgttttcgcccagcaaatgccataccct
tgcttcgtggatgacgtgttcctccggtctctggcacaatcccttcccttgtacatgact
ttagcctggatctactccgtggccatgatcgttaagggtatcgttgcggagaaagaagcg
aggctcaaggagaccgtgaggatcatgggcctgagaagtgccatctattggctgagctgg
gcagtgtccagtgtgctgccgctggccatcagcgctctcttccttacacttatactcaag
tacggcaaagtcctgcaatatagcgacccctcagtcatcttcgtcttcctgctggtgttc
tgcctggtcaccatcactcagtgcttcttcattagcgtcttcttctctaaggccaattta
gcggccgcatgcggtggcctcatctactttgtcctctacctgccgcacatcctttgctac
gcctggagggacgtcatgggtttcggggccaaggttgccgtgagtttattgtcatgtgtg
gcttttggctacggctgtgagaacttttccaagtacgaggagcaaggcatcggtatccag
tggtccaacattggcaagagtccagaggaaggggagcgctacaccttcattgtgtccatc
atcatgatgctgtttgatgctgtgatatactgggtgctcacctggtacattgaaaatgtc
tttccaggccaatacggaatccctaagccgtggtacttccctttcactgcttcttattgg
tgtgggaccgcctcagtgactgacgttgaccccggtttgctgacggactccggtgcacat
aacgagtatttggagaaaccgccacccaatatgaaagccggggtctcaatccgcaatctt
gtcaagatctacaagactggcaagaaacttgccgtggacggactgagtgtggacttctac
gagaatcagatcacatctttcctcggccacaacggagccggaaaaacaaccacaatgtca
attctgacaggactgttcccccccacatcaggaactgccctcatcaatggatttgacatc
cacactgacatggacagcatccggaagtacttgggaatgtgcccgcagcacaatgtctta
ttcaatgagctgacagtggaggagcacatatacttctacgccaggctgaaaggatgcagc
cgcgatgaggtgaaaattgagatggaccagatgattaaggatgtcggtttaccacataag
cgcaaggatcttgctaagaacctgtcaggtgggatgcagaggaagctgtctgtggctata
gcatttgccggcggatcaaaaatcgtcatcttagatgaacctacagcaggagtggacccc
tacgcccgcaggggtatctgggaactgctgttaaagtacaaacaaggtcgcaccatcatt
ttgtctacacaccacatggatgaggcagacatcttaggtgatcgcattgccatcatctcc
cacggcaaaatgcgttgctgcggctcctcgctcttcctcaagaagtgttttggcagcggc
tattacctcactctggtcagagatgggaatgaaaagatgacatcgcagcgtaatggtgtc
atacacagtcaggctaaaaaggaaaaagactgtccttcgaggagcagcagcccagacgac
ggcattggcagccaaagctggggcaactctgatccctcagatttgacagcagtgggtcaa
cttgtgcggcgccacgtccccgaggctgtcttcttggagaacatcggtcaggagatcacc
tacatactgccctatggtggagccagagatgggacctttgccctgctcttccatgagctt
gacctggccctagctgacctcggcctgaccagctacggcatctctgacacaacactggaa
gagatattcctaaaagtggctgaagataccggcgtggatgcagaaatttcaacaacacag
gagctgttggtgagagactgcaaaaggagctctcgtgaatccaaacggaacagcatcgcc
ggcgtccagactaaaacagaaatctctggatttagtgatttaaaagaaaagttcacaagt
aaagtggaagactcaaagaggaacgccagtgtcaatggaaggggatccacggtcatcacc
ggatgggagctgatcaggaggcagttcctggcgctctttatcaagcgcttccatcacgcc
aggaggagccgcaagggactcattgcacaggtggtcctgcctgctgtttttgtgtgcctg
tctctgatcttctcactcatcgtcccaccgttttccgaatatccaagtctggaactacaa
ccttggatgtatggtctccctcaaaccaccttttacagcaatgatgggccagataatgtg
gaggtgtcccatgtggtggaaaccctagtgaacaaccctggctttgggactcgctgcatg
aagggagacccaataccgaagttaccgtgtgcctccagtgggtctgaatggttcactcca
tctgtggaccagtcagtgactgacatctttctcaacgggaactggagcatgtcaaacccc
tccccctcttgtcagtgcagcactcctaaacggacaatcatgttaccagactgtccactt
ggtgctggagggcttcctccacctcagaggattcagaacacaacagacacactactgaat
ctaacaggacggaatatgacggacttcttggtcaagacttttgagcactcaggaaaaaca
aggtatggagggatctccgtcggtgcagtcaactcccaagtccgcctgaccgaggcagcg
atcgaagccgcattcagggatctaaaagacctattcacttcatttcaggataatgtgact
gatcagatcctccagaatgctgagactctgctgaagaagctgggaaccaggaacaacgta
aaggtgtggttctacaaccgggcatggcacggcatggcgtccttcctcagtgtggccaac
aacgccatcctgaggggaaatctgccagcaggacaggatccccgccagtatggcatctcc
gtttccaatcaccccctcaacctcaccaagcagcagctctcctatgtggccatggccaca
acctccactgacgtggtggtgtccatctgcgttatctttgccatgtccttcatccctgcc
agctttgtcctcttcctcatccaagagagggtgaacaaagccaagcatctgcaatttgtc
agtggagtaaacccagctgtctactggttggctaattttgtctgggacatgtgcaactac
atcatcccatgcttgattgtgattgtgatcttcctctgcttccaacaaaaagcctacgtt
tccccacctaacctgcctgctttggttctactccttattttgtacgggtggtccatcacc
cccatgatgtaccccgcctccttcatcttcagcgtgcccagcacagcctatgtggtgctg
acctgtataaacctcttcatcggtattaacggcagcgtggccacctttgttatggagcta
tttgacgatgataacgtctcccgcatcaacaacatagtgaagcaggtgctgctgatattc
ccgcatttctgtctgggccgagggctaatcgacatggccaagaaccaggcgatggccacc
ctcttcagcagttttggggaggaccgtttcaaggacccgcttagctgggagatggtggga
aagaatctttgcgccatgtccatccagggagttgtcatgtttactgtcacgatcctcatt
cagtataagttcttctgcaaaccaaggcttatttcagggaagtcattatctgcagaggaa
gaggatattgatgttgctcgggaacgtgagcgggtgtatgaaggcagggcccagaacgac
cttctgaggatctgtgatctgactaaggtataccctcggaagagcacccctgctgtggac
aggctatgtgtgggcgtacctgccgcagagtgtttcggcttgctgggaatcaacggggct
gggaaaaccaccacgttcaagatgctgacaggagacatcccagtctccggtggagaggcc
ttcctaaatggatacagcatacgcacagaaatgagggatgtacaccagaacacgggctat
tgtcctcagtttgatgctattgatgacctgctgaatggacgagagcatctggagttttac
gccaggttacgaggggttccagaaaaagaggtcaccatggtggctgagtgggggatccag
aagttgggactggtcaaatattccaacaaatcagcaggtacatacagcggtggaaacaaa
cgcaaactttctacagcgatggccttgatcggctgccctccagtgatcttcctggatgag
ccaaccactgggatggaccccaaagccaggcgcttcctgtgggactgtatcctgagcgtc
atcaaagagggacgctctgtcattctcacatcacacagtatggaggagtgtgaagcactg
tgcacacgcatggccatcatggtaaatgggcgcttcaagtgtctagggagcatccagcat
ctgaagagcaggtttggtgacggctacacagtgattgtgagagttggtggctctcctcct
gccttgaagccggtcgaggactttgtccagttgaccttcccaggcagcaccctgacagag
aagcatcacaacacactgcaatatcagctcccatacacacagggagctttggccaacatc
ttcagtcagttcaccacccatcaacagaggctgggcgtggaggattactctgtgtcccag
accacactggatcaggtcttcgtgaattttgcgaagcaccagcatggagaggaggactct
caggcctatgacaacccagtggacacctcagatgaggtgccaatgaagtctgtgacgacc
tccagagaaatgtcagagaaggcgtaa
DBGET
integrated database retrieval system
