Thunnus thynnus (Atlantic bluefin tuna): 137175712
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Entry
137175712 CDS
T11154
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04510
Focal adhesion
tty04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137175712 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137175712 (lamb1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
BLOC1_2
MbeD_MobD
Motif
Other DBs
NCBI-GeneID:
137175712
NCBI-ProteinID:
XP_067437643
LinkDB
All DBs
Position
23:complement(20401739..20435738)
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AA seq
1824 aa
AA seq
DB search
MRTCTRKVPLLRILHFIHTHTLSLSLSCRTHQHNQQAVNAPDLEMSLIIHILTTLALLCP
VWAQLPEFGDVCTEGSCYPATGDLLIGRAHKLVASSTCGLEKPERFCIVGHLEEEKKCFV
CDSRRMYDEDSNTVSHTIENVVTTFGPNRLKTWWQSESGVENVTIQLDLEAEFHFTHLIM
TFKTFRPAAMAIERSMDFGKTWQVYRYFAYDCEASFPGVSSGPIVKVDDIMCDSRYSDIE
PSTEGEVIFRVLDPAFEIEDPYSLRIQNMLKITNLRVNFVKLHTLGDNLLDSRDEVTEKY
YYALFDMVVRGNCFCYGHASECAPMDGAPIGAEGMVHGRCVCNHNTKGLNCERCQDFYHD
LPWRPAEGRNTHACKKCECNHHSTSCHFDLAMYMTTGNVSGGVCDDCQHNTIGRQCEQCA
PFFYQHPNRDLRDPNVCEPCNCDPSGSLQGGICDARTDVAAGLISGQCRCKGNVEGERCD
HCRQGHYGLGQGPHGCLPCTCNPLGTLPGGNPCDSNTGRCFCKRLVDGHNCDQCQPQHWG
LSNDMDGCRPCDCDQGGAVNNNCDPHSGQCVCREHMFGRRCNKVESGFYFITLDHYTYEA
EDAKHGPGVTVVPRPYPLDRSPTWTGMGFVNVPEGAYLEFTINNIPESMDYDLLIRYEPQ
LPEQWEQVNVRVQRPVLNDPNYSGHCSNSIQSGDEQSVSLPPGSRHVLLLRPVCFDKGLN
YTVRLSLPLYSSVSDVQSPYTLIDSLVLMPRVRELDMFHGIEGEGAWDTFQRYRCLETSQ
SVVKSPMTDICNDYIFSVSALLHKGAMACQCDPQGSLSTVCEFSGGQCQCRPNVVGRNCD
HCAPATFLFSPAGCRPCDCDPRGSVTAFCHEATGQCDCVPGATGRQCAHCLPGFWGFPQC
RPCHCNGHSEYCHPQTGECQGCRDFTTGHHCERCLDGYHGNAELGSGGHCRPCMCPDGPR
SGRQFSDSCYLPENTNQLVCVCSPGYKGARCDECAPGYFGNPLVPGGRCLPCQCNNNIDM
HDPHSCDARTGACLTCLYHTEGYACQHCKLGYYGNAATQSCRKCMCYSMGTAPQACSSPD
DCQCDRYSGQCSCQPNVIGQNCDRCAPDTWNIASGTGCQRCDCDLIHSFGPSCDLVTGQC
TCKPGFGGRTCRECKELFWGDPEVQCHACDCDPRGISSEQCHRATGQCTCVEGASGPRCD
KCARGYHGEFPACEPCHECFAIWDTVVGELTNQTKRLEAQVKELQTSGVTAPYRDLVSSL
ERNAKALREIVESNPVAVKLEQTQELMHQITGVMSYLNGKLNTTEENLNLLHSEANATDA
NLDELTDEANQLDQNVKELRQQVFDAKNANIQGAMDTITAAHTQSRMAERSANASTSDPD
NTVEQSAAVRKATEDKLSSSQKEFDRKHQRNSQKLDKLGNELDKFDLSPLSEKTCGAAAE
GDGCSGSPCGGLGCVGEDGEHHCGGEGCGGLVTTSQTALKSAKDLDQEILAAMQEVDKLS
RMVWEATTRANEAKANAQEVLIKSNRSKERVEQSNEQLRNLIKEIRDLLTNDKANVSVIE
AVANEVLALEMPTSSEKLQELTKEIKEKVGTLTSVETILSQSADDIHAAETLLKEAKAAS
EQATNMKETADVVMAALKETERAQAIAMDAIQQAENNTIGTKELLNSVESETAESELKLS
NTTGRLLQLERDVGLLRQNDLEVNRMADAADWITDQARQNAEEAQQEFDAEVKDKFEEME
DLVGDKGESVLQARRRADELQREARELLAQGSSKLQRLGELESSYEEHQRILEAKAAELA
ELEQTVRQILAEISYKVTLYSTCL
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgcggacttgtacaagaaaagtccccctgcttcggattttacacttcatacacacacac
acgctctctctctctctcagctgcaggacccatcaacacaatcaacaagctgtcaatgct
ccggacttggagatgtcgctcataatccacattttaacaactttggcactgttgtgtccc
gtctgggcgcagctgccggagttcggggatgtttgcacggaaggcagctgctatcccgcc
acaggtgacctgctgatcggccgggcgcataaactcgtcgcctcctccacctgcggcctg
gagaagccggagcgtttctgcatcgtcggacatctggaggaagagaagaaatgtttcgtg
tgcgactccaggcggatgtacgacgaggacagcaacaccgtcagccacaccatcgagaac
gtggtcaccaccttcggccccaaccgcctcaagacctggtggcagtcggagagcggtgtg
gagaatgtgaccatccagctggacctggaggctgagtttcatttcacacaccttatcatg
accttcaagacgtttcgaccggctgccatggcgatcgagcggtccatggactttgggaag
acgtggcaggtttaccgttacttcgcctacgactgcgaggcctccttccccggcgtgtcg
tcgggaccgatcgtcaaagtggacgacatcatgtgcgactcgcgttactcggacatcgaa
ccatccacagagggagaggtgatatttcgggtgctggaccccgcctttgagattgaggac
ccgtacagcctgaggatacagaacatgctgaagatcacaaacctccgagtcaacttcgta
aagctccacacgttgggcgacaatctgctcgactcccgcgacgaggtgacggagaagtac
tactacgccctcttcgacatggtcgtccgcggcaactgcttctgctacggccacgcctcc
gagtgcgccccgatggatggagcccctataggagccgagggaatggtccatggccgctgt
gtgtgtaatcacaacaccaagggactgaactgtgaacgctgtcaagacttctaccacgat
ttgccttggagacctgcagagggacgaaacacccacgcctgcaagaagtgcgagtgtaac
catcactccacctcgtgtcacttcgacctcgccatgtacatgacgaccgggaacgtgagc
ggtggcgtgtgcgacgactgccagcacaacacgatcggccgacagtgcgagcagtgcgca
cccttcttctaccagcaccccaatcgagacctgagggaccccaacgtatgcgaaccgtgt
aactgtgacccatccgggtctctgcaggggggaatatgtgacgcaaggacggacgtggca
gccgggctgatctcaggccagtgtcggtgcaaaggcaacgtggagggagagcgctgcgac
cactgcagacagggacactatggactgggacagggaccgcatggctgcctgccttgtacc
tgtaacccgctgggcacgctgcctggaggaaacccttgtgattcaaacacaggaaggtgc
ttctgcaaacgcctcgtcgacggacataactgcgatcagtgtcagccgcagcactggggt
ctgtccaatgacatggatggctgcagaccatgtgactgtgaccagggcggggctgtcaac
aacaactgcgaccctcattcaggacagtgtgtgtgcagggagcacatgttcggacgacgc
tgcaacaaggtcgagtccggcttctacttcatcactctggaccactacacgtacgaggct
gaggacgccaagcacggacctggtgtgacggtggtaccgaggccttatcctctggatcgt
agtccgacgtggaccggtatgggctttgttaatgtgccagaaggagcctacttagagttc
accatcaacaacatcccagagtccatggactatgacctgcttattcgttacgagccgcag
cttccagagcagtgggagcaggtgaacgtccgagtgcagcgtcccgtcttgaacgatcca
aactactccggtcactgcagcaactccatccagagcggagacgagcagtccgtctctctg
ccacctggatccagacacgtgctgctgttgaggccggtgtgtttcgacaaaggactgaac
tacacggtccgtctcagcctgccgctctactcgtcagtcagcgacgtccagagcccgtac
acgctcatcgactctttggtgctgatgccccgggtcagggagctggacatgttccatggg
atagaaggtgaaggagcgtgggatacgttccagcgctaccgatgtctggagaccagccag
agcgtcgttaagagccccatgaccgacatctgtaacgactacatcttcagcgtctccgct
ctgctgcacaaaggagccatggcgtgtcagtgcgaccctcagggttcgctcagcaccgta
tgtgagttcagcggaggtcagtgtcagtgtcgacccaacgtggtcggcaggaactgcgat
cactgcgccccggccaccttcctgttcagccccgccggctgcagaccttgcgactgtgat
cctcggggatctgtcaccgccttctgccacgaggcgaccggccagtgtgactgcgtcccc
ggggccacagggcgccagtgtgcccactgcctgccgggcttctggggcttccctcagtgc
cgaccgtgtcactgcaacggccacagcgagtactgtcaccctcagaccggagagtgtcag
ggctgccgagacttcaccaccggacaccactgtgagaggtgtctggatggttaccacgga
aacgcagagttgggttcaggtggccactgtcgcccctgtatgtgccccgacgggccgcgc
agtggacgccagttttctgacagctgttaccttccggagaacactaaccagctggtgtgt
gtgtgcagccctggctacaaaggcgccaggtgtgacgagtgcgctccgggttacttcggg
aaccctctggtacccggcgggcgctgcctgccctgccagtgtaacaacaacatcgacatg
cacgacccgcattcctgcgacgctcggacgggtgcgtgtctcacatgcctgtaccacacg
gagggctacgcgtgccagcactgcaaactgggttactatggcaacgctgccacacagagc
tgcaggaagtgcatgtgttactcaatgggcacggcgcctcaggcctgctcctccccagac
gactgtcagtgcgaccggtacagcggccagtgctcctgccagcccaacgtgatcggtcag
aactgtgaccgatgcgccccggatacgtggaacatcgccagcgggacgggctgccagcgc
tgcgactgcgacctcatccactccttcggaccttcctgcgatttggtcacaggacagtgt
acctgcaaacctggttttggtggcaggacgtgtcgggagtgtaaagagctcttctgggga
gatccagaggtccaatgtcacgcttgtgactgcgatcctcggggaatctccagcgagcag
tgccatcgcgccacaggacagtgtacctgtgtggagggcgcgtccggcccgcgctgcgac
aagtgcgcccgaggctaccacggggagttccccgcctgtgaaccttgccacgagtgcttc
gccatctgggacactgtggtcggcgagctgaccaatcaaacgaagcgtctggaggcccaa
gtgaaagagctccagaccagcggggtgacggcgccgtatagagatctagtcagcagcctg
gagagaaacgccaaagctctgagagaaatagtagagagcaacccggtggcggtgaagctg
gagcagacgcaggagctgatgcatcagatcacgggtgtgatgtcatacctgaatggaaag
ctgaacacgacggaggagaacctgaaccttctccacagcgaggcaaacgccaccgacgcc
aacttggacgaactgacggacgaggcgaaccagctggatcagaacgttaaggagctgaga
cagcaggtgtttgacgccaagaacgccaacatccagggtgccatggacaccatcacagcg
gcgcacacacagtccaggatggcagagcgcagcgccaacgcctctaccagtgatcccgac
aacacggtggagcagtcggccgcggtacggaaagccacggaggacaaactgagcagcagt
cagaaggagtttgaccgcaagcaccaaagaaactcgcagaagttggacaaactgggcaat
gagctggataagtttgacctgtcgcctcttagcgagaagacatgcggcgctgcagctgaa
ggtgacggctgctccggctccccctgcggcgggttgggctgcgtcggcgaggacggagag
catcactgcggaggagaaggatgcggaggcctcgtcacaacctcccaaactgctttaaaa
tcagccaaagatctagaccaggagatccttgcggcgatgcaggaggtggataagctctcc
aggatggtgtgggaagccactacccgcgcaaacgaggccaaggcgaacgcccaggaggtg
ctgatcaaatccaaccggagcaaagagagagtggagcagagcaacgagcagctccgcaac
ctcatcaaagagatacgagacctgctcaccaatgacaaagccaacgtgtccgtgatcgag
gcggtggccaacgaggtgttggctctggagatgccgacctcgtcagagaagctgcaggag
ctgacgaaggagatcaaggagaaggtcggcactctgaccagcgtggagaccatcctcagt
cagagcgctgatgacatccacgccgcagagacgctgctgaaggaggcgaaggctgccagt
gagcaggcgaccaacatgaaggagacagcagacgtagtgatggcggccctgaaggagact
gagcgcgctcaggccatcgccatggacgccatccaacaggccgagaacaacactataggc
acgaaggaactgctgaactctgtggagtcggagacggccgagtcggagctgaagctgagt
aacacgacgggtcgtctgcttcagctggagagggacgtcggcctgctgaggcagaacgac
ctggaggtgaaccgtatggcggacgcggccgattggatcacagaccaggccagacagaac
gcggaggaggctcagcaggagtttgacgcggaggtgaaagataaattcgaggagatggag
gacctggtcggggataaaggggagtcggtgctgcaggcgaggaggagagcggacgaactg
cagcgggaggccagagagctgctggcccagggcagcagcaagctgcagagactcggagag
ttggagagctcctacgaggaacaccagcgcatcctggaggccaaagccgcggagctggcc
gagctggagcaaacggtccgccagatcctggcagagatcagctacaaagtgacgctgtac
agcacctgtctgtga
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