KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137175954
Entry
137175954         CDS       T11154                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:tty00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tty01009]
    137175954 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tty03036]
    137175954 (kdm5a)
Enzymes [BR:tty01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     137175954 (kdm5a)
Protein phosphatases and associated proteins [BR:tty01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     137175954 (kdm5a)
Chromosome and associated proteins [BR:tty03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    137175954 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_5 GlgE_dom_N_S
Other DBs
NCBI-GeneID: 137175954
NCBI-ProteinID: XP_067438002
LinkDB
Position
23:complement(10384512..10403868)
AA seq 1751 aa
MSAFAEFVPPPECPVFEPSWEDFSDPLGFINKIRPIAEKTGICKIRPPEDWQPPFACDVR
NFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKIRFPHVERKILDLYQLGKIVSS
EGGFETVCKEKRWSKVSSRMGFPSGKGTGSLLRSHYERILYPYELFQSGATLTGLQRLYD
EGDDEEEVDEGVGEEAVEEEDLEEEDDKDKERDGEVDATQTKERLLPERRSRRLKSEREN
KEPKGLKIFGTSPKMVGLEIVSADDGFNKRQRHLKAQAFAIKMRPRKETLEVNFIDLYLC
LMCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFGFEQ
AVREYSLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSK
EVGSGFPIRDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLTHINVDISGMKVPWLYVGMC
FSSFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEQLEAVMKKLAPELFDSQPDLLHQL
VTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPMGR
QCVAHYRRLHRYCVFSHEELLCKMAADPESLDVELAAAVFKEMGDMMAEETQLRQAVQEM
GVLSSEQEVFELVPDDERQCHKCKTTCFLSALTCSCSPDRLVCLHHAADLCDCPLGNKCL
RYRYDLEEFPSMLYGVKTRAQSYDTWAKRVTEALAADQKNKKDLIELKVLLEDAEDRKYP
ENALFRRLREMVKEAETCSSVAQLLLSRKQRHSSRLRSESSRNRTKLTVDELKAFVDQLY
RLPCIISQARQVKELLENVEDFHERAQVALADEMPDSSKLQALLDLGSGLDVELPELPRL
KQELQQARWLDEVRVTLAEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVSER
WEDKARACLQARPRHSMVTLESIVLEARNIPAYLPNILALREALQKAKEWTAKVEAIQSG
SSYAYLEQLESLLARGRSIPVRLDPLAQVESQVASARAWRERTARTFLKKNSTYTLLQVL
SPRVDIGVYGNSKSKRKRVKELMEKERGGFDPDTLSDLEESLEEVRDPATVVAAFKSKEQ
KEVEAIHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGACVPLPKTG
SQKKLGVGWQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTER
AMSWQDRARQALATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQGH
IQTFQQSGFSRATSPRQSVDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVKS
EEVVSHMWPAATPSFCAEHAYSSASKSCVQNLGTPRKQPRKTPLVPRSLEPPVLELSPQA
KAQLEELMMLGDLLEVSLDETQHIWRILQATHPPSEERFLQVMEPDDSLMEKPLKIKLKD
SEKKRKRKLERAEHHHMLMAAAGGASPMGDMRPAKSKELKRVGLELGLGGKPKKKKLKLN
LEKNREMKQLAKRLAKEEKERKRKEKAAAKAEAIREGLEKRKEKKILDIPSKYDWSGAED
SNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICMDCSRKA
AGGGGGGAGMTVEEVAEESVVVLATSMCSGSVQSLPSPAAVVASWSHAPSALLLNPASSH
HQQQQEPQQGS
NT seq 5256 nt   +upstreamnt  +downstreamnt
atgtctgcatttgctgagtttgtcccccctcctgaatgtcctgtttttgagccgagttgg
gaggatttctcggatccattaggatttatcaacaagatccgacccattgcagagaaaacg
ggcatctgcaagattcgaccccccgaggactggcagcctccgtttgcctgcgatgtgcgc
aacttccgcttcactcctcgagtacaaaggctgaatgaacttgaggccctcactcgggtt
aagctcaactttctggatcagatcgcaaagttctgggaactgcagggatccaagattcga
ttccctcacgtggagagaaagatcctggacctctatcagctcggcaagattgtgtcatcc
gagggcggctttgagacggtgtgtaaagagaagaggtggtctaaggtgtccagtcggatg
ggcttcccatctgggaaaggaaccggttcactactacgctcccactatgagaggatcctg
tacccctatgagctcttccagtctggagccacactaactggcctccagcggctgtacgat
gagggggatgatgaggaagaagtagatgagggggttggcgaggaggcggtggaggaggag
gatctagaggaggaggatgataaagacaaggagagagacggggaggttgatgcaacgcaa
accaaagagcggcttctgcctgagagacgctccaggcgtcttaagtctgagagagaaaac
aaggagccaaaaggcctcaagatctttggtacaagtcccaagatggtgggcttggagatc
gtgtcagctgacgatggattcaacaagaggcagcgtcacctcaaagctcaggccttcgcc
atcaaaatgagaccacgcaaggagaccctggaggtcaactttatcgacctgtacctctgc
ctgatgtgtggacgaggcgacgaggaggaccggctcctgctgtgtgatggctgcgacgac
agctaccacaccttctgtctgatcccgcccctgcaggatgtgcctaaaggggactggcgt
tgccccaagtgtgttgctgaggaatgcagtaagcccagggaggcatttggctttgagcag
gctgtgagggagtactctctccagagctttggagaaatggctgaccacttcaagtctgac
tatttcaacatgcctgttcatatggtccccacagagctggtggaaaaagagttctggcgt
ctggtcagcagcatcgaagaggacgtcatcgtagagtacggagctgatatcagctctaag
gaggtgggcagcgggtttcccatcagggacggcaagaggaggctactgggagatgaagag
gagtacgccaactcaggctggaacctgaacaacatgccggtgctggagcagtcggtgctc
acccacatcaacgtggacatctcgggtatgaaggtaccctggctctacgtgggcatgtgt
ttctcctcattctgctggcacatcgaggaccactggagttactccatcaatttcctgcac
tggggagagccaaagacctggtatggagtgccagcctcagcagcagagcagctggaggcg
gttatgaaaaagttggctccagaactgttcgactcccagcctgacctcctccatcaactg
gtcaccatcatgaatcccaatgtccttatggagcatggcgtccctgtgtacaggactaat
cagtgtgcaggggaatttgtggtgactttccccagggcgtaccacagcggcttcaaccag
ggctacaatttcgcagaggctgttaacttctgcacagctgactggttacctatgggccgt
cagtgtgtggcccactaccgacgcctgcaccgctactgcgtcttctcccatgaggagctg
ctgtgcaagatggctgctgatccagagagtcttgacgtggaactggctgctgctgttttc
aaggaaatgggagacatgatggcggaggagacacaactcagacaggcggtccaagaaatg
ggggtgctgtcttcagagcaggaggtttttgagctggtccctgacgacgagcgccagtgc
cacaagtgtaagacgacctgtttcctgtctgcgctgacatgttcctgtagccccgaccgg
ctggtttgtctccatcatgcggcagatctctgtgactgtccactcggcaacaagtgtctc
cggtatcgctatgatctggaggagtttccgtccatgttgtatggagtcaagacacgggca
cagtcctacgacacctgggcaaagagagtcactgaggccttggcagcagaccagaagaac
aagaaagatcttattgagctcaaggttttgctggaggatgcagaggacaggaagtaccct
gagaacgctctgttccgtcgccttagggagatggtaaaggaggcagaaacatgctcctct
gtagcccagctgctgctcagccgcaagcagagacacagcagccgcctgcgttctgagagc
agtcgtaaccgtaccaaactgacagtggatgagctcaaggccttcgtggaccagctctac
aggctgccctgcatcattagccaggcccgtcaagtcaaagagttactggaaaatgtggag
gacttccatgagcgagcccaggtggcactggcagatgagatgcctgattcctccaagctt
caggctctgttggaccttggcagcggcctggacgttgagctgccggagcttccccgactc
aaacaggagcttcaacaggcccgctggctcgacgaggtgcgtgtcaccctggccgagcct
caccgcgtcaccctggagctgatgaagaggctgatagactctggggtgggcctggctccc
caccacgctgtggagaaggcaatggccgaactgcaggagatcctcactgtctcggagaga
tgggaggataaggctcgtgcctgcctgcaggccaggcctcgccacagcatggtgaccttg
gagagtattgtgctggaggccaggaacattccagcatacttacctaatattttggccctc
cgagaggccctgcagaaggctaaggagtggactgccaaggtggaggctatccagagtggc
agtagttatgcatacctggagcagctggagagcctgctggctcgaggtcgctccatccct
gtccggctagatccgctggcccaggtggagtcacaggtggcctcagctagagcctggagg
gagaggactgctcgcacattcctcaagaagaactccacctacacactgctccaggttctc
agtcctcgtgtggacatcggggtctacggcaacagcaagagcaagcggaagcgcgtcaaa
gagctcatggagaaggagagaggaggctttgacccggacaccttgagtgacctggaagag
agcctcgaggaggtgcgagatcccgccaccgttgtagcagccttcaaatccaaagagcaa
aaagaagtagaggccatccattcgctccgcgccgccaatctagccaagatggccatggcc
gaccgcatcgaggaagtcaagttctgcctgtgtcgaaagacggccagcggtttcatgctg
cagtgcgagctgtgtaaggactggttccacggagcgtgcgtgcctctacccaagacagga
tcccagaagaagctgggtgtgggctggcagagcaatagcaaagactccaaattcctgtgc
ccgctgtgtcagaggtcgaggaggccgagattagaaaccatcctgtcgctgttggtgtcg
ctgcagaagcttccagtgcgtctaccagaaggagaggccctccagtgtttgacagagagg
gcaatgagctggcaggacagagcacgtcaagctctggccactgaggagctgtcctcagcc
ctggcgaagctgtcagtgctgagccagcgcatggtggagcaggccgctagggagaaaacc
gagaagatcatcaatgccgagttgcagaaagctgctgccaaccctgacttgcagggccac
atccagacttttcagcagtcaggtttcagcagagccacatcacctcggcagtctgtggac
tacgatgacgaggagacagactcagatgaggacatcagggagacttacggttacgacatg
aaggacccgggcgaggtgaagccctaccttttctgtgatgaggagatccctgtgaagtcc
gaggaagtggtcagtcacatgtggccggctgccacgccctccttctgcgccgaacacgcc
tactcctcagcctccaagtcctgcgtgcaaaacctgggcacgcctagaaagcagcccagg
aagacccctctggtccctcgcagcctggagccgccagtgctcgagctgtccccgcaggcc
aaggcccagctggaggagctgatgatgctgggagacctgctggaggtgtccctggatgag
acccagcacatctggaggatcctgcaggccacgcaccccccctcggaggagagattcctg
caggtcatggagcctgatgactctctaatggagaagcctctgaaaatcaagctaaaagat
tcagagaagaagaggaaacggaagttagaaagggccgagcaccaccacatgctgatggcc
gccgccggtggcgcctcgccaatgggagacatgcgaccagccaagtccaaagaactgaaa
agggtgggcctggagcttggtcttgggggcaaacccaagaagaagaaactcaaactcaac
ctggagaagaaccgggagatgaagcagctggccaaacgtttagccaaggaggagaaggag
aggaagcggaaggagaaggcagccgccaaggccgaggccatcagggaggggctggagaag
aggaaagagaagaagattcttgatattccctccaagtatgactggtctggggctgaagac
tccaatgatgagaacgctgtttgtgcagccaagaactgccagagaccctgtaaagataag
gtggactgggtgcagtgcgacggcggctgcgacgagtggttccaccaggtgtgcgtgggc
gtgtcgtgcgagatggcggagaacgaggattacatctgcatggactgctcccggaaggcc
gccggagggggcgggggaggcgcggggatgacggtggaggaggtggcagaggagagcgtg
gtggtgctggcgacatcgatgtgcagcggcagcgtgcagagtctgccttcgccggcggcg
gtcgtggcctcgtggtctcacgcgccatccgccttgcttctaaacccagcgagttcacat
catcagcagcagcaagagcctcagcagggcagttag

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