Thunnus thynnus (Atlantic bluefin tuna): 137176103
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Entry
137176103 CDS
T11154
Symbol
cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03015
mRNA surveillance pathway
tty03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137176103 (cpsf6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
137176103 (cpsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137176103 (cpsf6)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
137176103 (cpsf6)
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GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
137176103
NCBI-ProteinID:
XP_067438266
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Position
23:complement(14316394..14332548)
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AA seq
585 aa
AA seq
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MADGVDHIDIYADVEEEFNQEADYPVHEQIDLYDDVISPSANNGDAPEDRDYLDTLPAPG
GTEGGKSAPPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAIRSIGITDVLEIKFFENRAN
GQSKGFALVCVGSEASSRKLMELLSKRELHGQNPIVTPCNKQSLSQFEMQSRKSTQSGQM
SGEGKAGPPGAGPRGGFPMGRGRGRFPGPPGPGGDRFPGPVGPGGPPPHFPGSGMRPDLI
RHQDGPLMDMNFSPFPPGGRNGSWRGRGGMQGPPRPPPGPPGPPGPPGPPPPGQGLPPPL
AGPPNRGDRPPPPVLFPGQFGQPPMGPLPPGPPPPGYGPPPGPPPPQQGPPPPGPFPPRP
PGPIGPPMALAPPPHMPGPPPGGPPPAPHVNPAFFPPPGNNSMPPNDSRGPPGPNDPYGR
PPPYERGDYGPGGREMEASRTPLSEAEFEEIMNRNRAISSSAISRAVSDASAADYGSAIE
TLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSASRRERSRERDHSRSREKS
RRHKSRSRDRHEDYYRERSRERDRHRERDRDRDREREREREYRHR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgtggatcacatcgacatctacgccgacgtcgaggaggaattcaaccag
gaagctgactacccggttcatgagcagatcgacctgtacgatgatgtaatatccccatcg
gccaataatggtgatgcgccagaagaccgtgactacctggacacactccctgcgccaggt
ggcacagaaggagggaaaagcgccccacccaacgtggtatacacctacacaggcaaaagg
attgccctatacattggaaacctcacatggtggacgacagatgaggacctgacagaagca
atccgatcaatagggatcacagatgtgctggagatcaaattctttgaaaacagagccaat
ggacagtccaaagggtttgctctggtgtgtgtgggctcagaggcatcatccaggaagtta
atggagcttctgtcaaagagggagctccatggccagaatcccatcgtcacaccgtgcaac
aaacagtccctcagccagtttgagatgcagtcacgcaaaagtacccagtcaggccagatg
tctggggaaggtaaagctggtccccctggcgctggccctcgtggaggttttcccatgggt
agaggaagaggaaggtttcctggaccacctggccctggaggagaccgctttcctggtccc
gttgggcctggagggccaccaccacacttccctggctcggggatgagaccagatctgatt
aggcaccaagatggccctctgatggatatgaatttcagtcccttcccgccggggggcagg
aacgggagctggcgtggcagaggtgggatgcagggtcccccacggccccctcccggtcca
cctggtccaccaggccctccaggacctccacctcctggccagggtcttccccctcccctt
gctggtcctccaaatcgcggcgacaggcctcctccccctgttctcttccctggtcagttt
ggccagccaccaatgggacccctaccgccaggcccccctcctccaggttacggccctccc
cctggccccccacccccccaacagggccccccacccccaggaccattccctcctcgtccc
ccaggccccattgggccccccatggctttggctccacctcctcacatgccaggtcctcca
ccaggtggcccaccaccagcaccgcatgtcaatcctgccttcttccctccacctggcaac
aacagcatgccccccaacgacagccgaggacccccaggaccaaacgacccatacggacgc
cctccaccttatgagagaggagactatggtcccggaggccgggagatggaggcgtcacgg
acccctctgagtgaggccgagtttgaggagatcatgaacaggaacagagccatctcctcc
agtgccatatctagagcggtgtctgacgccagtgcagctgactatggcagcgctatagag
accttggtgacagccatcagtctgattaagcagtccaaagtgtcagcagacgaccgctgc
aaggtcctcatcagttctctgcaggactgtcttcacggcatcgaatcaaaaagctacggc
tctgcctccaggcgagagcgttccagggaacgtgaccacagccgctcaagggaaaagagc
agacgccacaagtcccgcagtcgggatcggcatgaggactattaccgagaacgcagccga
gagcgtgaccgccatcgtgagagggacagggaccgagaccgggaaagagagagggagagg
gagtacagacaccgctag
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