Thunnus thynnus (Atlantic bluefin tuna): 137176926
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Entry
137176926 CDS
T11154
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04140
Autophagy - animal
tty04148
Efferocytosis
tty05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137176926 (vps16)
04148 Efferocytosis
137176926 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137176926 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137176926 (vps16)
Membrane trafficking [BR:
tty04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137176926 (vps16)
Hops complex
137176926 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
137176926
NCBI-ProteinID:
XP_067439061
LinkDB
All DBs
Position
24:20862611..20878714
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AA seq
834 aa
AA seq
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MAFITANWNPLGEAFYRKTELYEMCWSLRDGLRDCLVAAAPYGGPIALLREPLRRSPSSR
PQLEIYSASGVAIASFPWKSGPVVQLGWTVSDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVVQTQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGPPSCWAVL
TQDRQTKVLLATGPDLYILDNTSCTAVCPPGLGPQAGSIVHMCVSFSYKYLALFTDTGHL
WTGPSHLQDKLSEVDTKVRTPPKQMVWCRRPKSQQPSVVLMWDRLLLVAGVCSDTIQFPL
EDQCVCVGELDGVRIISSSNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKCSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDSNTQKSLLRAASFGKCFLTDFSPDSFVSTCR
ELRVLNAVRDASVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAVCLKVGDSPGVSYSHIAAKAYECGRTELAIKLLDYEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVSYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTASYREKRLETRLSLLQTAVDEYNKAKNE
FAAKATEEEMKLLRFQRKLDDEKGAGLLGLSLQATMEALLALGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKSNNKYEARKYVSKVTPEQK
VKAHLAVSDLEGAAEAAIERKNESEMGAVLSRCSASDRLLIDRLNRAKASAAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacagccaactggaacccgctgggagaagctttctaccgtaaaacagag
ctgtatgagatgtgttggagtctgagggatggactcagagactgtctggtggctgctgct
ccgtatggaggaccgatagctctcctcagagaacctctcagacgttctccaagttctcgt
cctcagttggagatttattctgcgtctggagttgccatcgccagcttcccgtggaaaagt
ggtccagtggtgcagttgggttggacggtcagcgacgagcttctgtgtattcaggaagac
ggttcagttctgatctacgacctgttcggatcctttaagagacacttcagcatgggacag
gaagtggtccagactcaggtcttggaggccaaagtgttccactctccatatgggacaggg
gtcgccatagtaacaggctcctcccgcttcaccttggcaaccaacattgatgacctgaag
cttaggaggttacccgaagtcccaggtctgcaggggcctccgtcctgctgggccgtcctg
acccaggaccgccagaccaaagtcctgctggctaccggaccagacctctacatcctggac
aacacgtcctgcaccgctgtgtgtcctccaggtctcggtcctcaggccggcagtatcgtc
cacatgtgtgtatccttcagctataaatacctggctctcttcactgacactggacacctg
tggacaggcccctcccacctccaggacaaactgagtgaggttgacaccaaggtgaggacg
cctcccaaacagatggtttggtgtcgaagaccgaagtcccagcagccgtctgtggtgttg
atgtgggacagactcctcctggtggccggagtctgtagtgacaccatccagttcccgctg
gaggatcagtgtgtttgtgtcggcgagctggacggcgttcggatcatcagctcgtccaat
caggagctgctgcaggaggtccctttggtctgtcaggacatcttcaagatcgcctccatg
gcgcccggagctctgctgctggaggctcaccgcgagtacgagaagtgcagtcaaaaggct
gatgagtacctgagggagatcaaggagcaaagcatgctgggagaagcagtcagacagtgt
gtggaggcagcaggacacgagtacgactccaacacccagaaatccctgctgagggcggcg
tcctttggaaagtgcttcctcacagacttcagcccggactcgttcgtgtcgacctgcaga
gagttgcgagtgctgaacgccgtcagagacgccagcgtgggtttgccgctcacacacact
caattcaaacagatgactctgcaggtgttgatcgacaggttggtgtatcgacagttttat
ccgttagcgatagaaatctgtcgttaccttaagattccagattatcagggagtcagcaga
gttctcaaacactgggcttcatgcaaggtgcagcagaaggacctatcagatgaggccata
gccagagcggtgtgtctgaaggtgggagactcacctggtgtttcctattcacacatcgca
gccaaagcttatgaatgtggacgcaccgagctcgccatcaagctgctggactacgaggct
cgctcaggtgagcaggttcctctgctgctgaagatgaagaggagtcagctggctctcagt
aaagccgtggagagcggagacactgacctggtgtacacggtggtgagttacctgaagaat
gagatgaacagaggagatttctttatgactctgaggaaccagccagtcgctctcagcctc
tacagacagttctgtaagctgcaggaacaggagacactgaaggatctttataaccaggac
gacgaccaccaggagctcgctaactactacgttactgccagttacagagaaaagaggtta
gagacccgtctgtccctcctgcagaccgctgtggacgaatacaacaaggccaagaacgag
tttgctgccaaggccacagaagaagagatgaaactgctgcgattccaaagaaaactggac
gacgagaaaggggcggggctcctgggactgtctctacaggcaaccatggaggctctgctg
gctctaggacttcacaaacaggctgaacaactttacagagacttcagagtccctgacaaa
agatattggtggctgaaactgaagtctctggcagagaaggaggagtgggaggagttagag
aagttctcaaagagcaagaaatctcctattggctacctggcatttgtggaagtctgcatg
aagagtaacaacaagtatgaagccaggaagtacgtttccaaggtgacgcctgagcagaag
gtcaaagctcacctggccgtcagtgacctggagggcgcggcagaggcggcgatcgagcgc
aagaacgaatcagagatgggggcggtcctctccagatgctccgcctccgaccggctgttg
attgacaggttgaatcgagccaaagcttccgctgccaaaaagtga
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