Thunnus thynnus (Atlantic bluefin tuna): 137179542
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Entry
137179542 CDS
T11154
Name
(RefSeq) aly/REF export factor 2-like
KO
K12881
THO complex subunit 4
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03013
Nucleocytoplasmic transport
tty03015
mRNA surveillance pathway
tty03040
Spliceosome
tty05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137179542
09122 Translation
03013 Nucleocytoplasmic transport
137179542
03015 mRNA surveillance pathway
137179542
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137179542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137179542
03041 Spliceosome [BR:
tty03041
]
137179542
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137179542
TREX complex
137179542
Spliceosome [BR:
tty03041
]
Complex C
Other components
EJC/TREX
137179542
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137179542
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
YHR127W_C
RRM_10
Motif
Other DBs
NCBI-GeneID:
137179542
NCBI-ProteinID:
XP_067440404
LinkDB
All DBs
Position
3:13084060..13087157
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AA seq
265 aa
AA seq
DB search
MADKMSMSLDDIIKMNKKGGSGRGGASSGSGGSSGRAGGWSRSVRSRQNNFSREKNNRTT
PYTRPRELPDKWQHDMFEEHTSGRRAPERSEDSSGKLLVSNLDFGVSDSDMKELFEEFGE
LKKISVHYDRSGRSKGTADVHFVTRADALKAMKHYNGVPLDGRPMKIQQVTSEVDTQSRQ
PTQSSNRGFDRSRLGQHKFERNERSERNERSERNERSERRQGGGGGGGRGSRGRGRGSGN
RPQLSAEELDAQLDAYNAMSQMDTS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatgagcatgtctctggatgacattatcaagatgaataagaaaggaggc
agcggccgcggcggagcatcgtccggctcggggggaagttcaggtcgggccggtggatgg
tcgaggtcggtgcggagtcgacagaataacttcagccgcgagaaaaacaacagaaccaca
ccgtacaccaggcccagagagttaccagacaaatggcagcatgacatgtttgaggagcac
accagtggacgcagggcaccagaaagaagtgaagacagtagtggcaagctgctagtttcc
aatctggactttggcgtctccgactcagatatgaaggagctgtttgaagagtttggagaa
ttaaagaagatatctgtacactatgaccggtccggccgcagtaaaggaactgcagatgtt
cactttgtaacaagggcagatgcactcaaagccatgaagcactacaatggtgtcccactc
gatggccgccccatgaaaatccagcaagtgacttcagaggtcgacacacagagtagacag
cctacacaaagttcaaacagagggttcgacaggagcaggcttggccaacacaagtttgaa
aggaatgaacggagtgaaaggaatgaacggagtgaaaggaatgaaaggagtgaacggagg
caaggtggtggtggtggcggcggcagaggttccagaggtcggggaaggggaagtggaaac
aggccccaactttctgcagaagagttggatgcccagttggatgcttacaatgctatgtct
cagatggacaccagttag
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